Miyakogusa Predicted Gene

Lj1g3v0968900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0968900.1 tr|G7J6T9|G7J6T9_MEDTR Phosphomevalonate kinase
OS=Medicago truncatula GN=MTR_3g091190 PE=3 SV=1,88.71,0,Ribosomal
protein S5 domain 2-like,Ribosomal protein S5 domain 2-type fold; no
description,Ribosomal,CUFF.26685.1
         (507 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g091190.1 | phosphomevalonate kinase | HC | chr3:41453682-...   738   0.0  

>Medtr3g091190.1 | phosphomevalonate kinase | HC |
           chr3:41453682-41448415 | 20130731
          Length = 508

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/505 (72%), Positives = 394/505 (78%)

Query: 3   VVASAPGKVLMTGGYLILERPNAGLVLSTSARFYAIIKPFHPQIKPDAWAWGWTDVKLTS 62
           VVASAPGKVLMTGGYL+LERPNAGLVLST+ARFYAI+KP +PQ KPD+WAW W+DV+LTS
Sbjct: 4   VVASAPGKVLMTGGYLVLERPNAGLVLSTNARFYAIVKPIYPQTKPDSWAWAWSDVRLTS 63

Query: 63  PQLSREALYKLALNNLTIQNVSSCESRNPFXXXXXXXXXXXXXXTFXXXXXXXXXXXXXX 122
           PQLSREA YKLAL NLTIQ VSS E+RNPF              T               
Sbjct: 64  PQLSREAFYKLALKNLTIQTVSSSETRNPFVEYAVQYSVAAAYATADQNKKDLLHKLLLQ 123

Query: 123 XXXITILGSNDFYSYRNEIEKRGLPLTPESLATLPPFAFISFNTDDAIEGSCKPEVAKTG 182
              ITILGSNDFYSYRNEIE+ GLPLT ESLATLPPFA ISFNTDDA  G+CKPEVAKTG
Sbjct: 124 GLDITILGSNDFYSYRNEIERHGLPLTSESLATLPPFASISFNTDDANGGNCKPEVAKTG 183

Query: 183 LGXXXXXXXXXXXXXXHYLGVVELSSTKDHGNRKDIADLDLVHKIAQTAHCVAQGKVGSG 242
           LG              HYLGVV++SS+KD   RKDIADLD+VHKIAQTAHC+AQGKVGSG
Sbjct: 184 LGSSAAMTTAVVAALLHYLGVVKISSSKDRQERKDIADLDMVHKIAQTAHCIAQGKVGSG 243

Query: 243 FDVSSAVYGSHRYVRFSPEVIXXXXXXXXXXPLPEVITDILKGNWDHDRTEFXXXXXXXX 302
           FDVSSAVYGSHRYVRFSPEVI          PLPEVI+DILKGNWDHDRTEF        
Sbjct: 244 FDVSSAVYGSHRYVRFSPEVISSTQVAATVVPLPEVISDILKGNWDHDRTEFSLPPLMTL 303

Query: 303 XXXXXXXXXXXXXXMVGAVKKWQKSDPQKSLDTWRRLSEANSALELQLNLLSKLAKEQWD 362
                         MVG+VKKWQKSDPQKSL+TWRRLSEANSALE+QLNLL KLAKEQWD
Sbjct: 304 VLGEPGTGGSSTPSMVGSVKKWQKSDPQKSLETWRRLSEANSALEIQLNLLRKLAKEQWD 363

Query: 363 AYKSVIDSCSILRSDKWIEQASEPVKEAVIKALLGARDAMLGIRYHMRLMGEASGVPIEP 422
           AYKSVID+CSILRSDKWIEQAS+  KEAVIKALLG+++AM+GIRYHMRLMGEA+GVPIEP
Sbjct: 364 AYKSVIDNCSILRSDKWIEQASDSNKEAVIKALLGSKEAMVGIRYHMRLMGEAAGVPIEP 423

Query: 423 ETQTQLLDATMNLEXXXXXXXXXXXXYDAVFAVTLGDSSSNVTKVWGSLNVLAMLVKEDP 482
           E+QT LLDATMNLE            YDAVFAVTLGDS+SNVTK W SLNVLAMLVKEDP
Sbjct: 424 ESQTHLLDATMNLEGVLLAGVPGAGGYDAVFAVTLGDSNSNVTKTWSSLNVLAMLVKEDP 483

Query: 483 CGVSLESADPRTNEITSAVSSIHIE 507
           CGVSLESADPRTNEITSAVSSIHI+
Sbjct: 484 CGVSLESADPRTNEITSAVSSIHID 508