Miyakogusa Predicted Gene

Lj1g3v0958830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0958830.1 tr|G7J7E9|G7J7E9_MEDTR Soluble starch synthase
OS=Medicago truncatula GN=MTR_3g091570 PE=3
SV=1,84.21,0,UDP-Glycosyltransferase/glycogen phosphorylase,NULL;
STARCH SYNTHASE,NULL; GLYCOSYLTRANSFERASE,NULL;,CUFF.26581.1
         (149 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g091570.1 | starch synthase 2/amyloplastic protein | HC | ...   275   2e-74
Medtr3g091570.2 | starch synthase 2/amyloplastic protein | HC | ...   271   1e-73
Medtr6g012380.1 | granule bound starch synthase | HC | chr6:3736...   181   2e-46
Medtr8g024340.2 | granule bound starch synthase | HC | chr8:8933...   109   1e-24
Medtr8g024340.1 | granule bound starch synthase | HC | chr8:8933...   109   1e-24
Medtr1g078000.2 | granule bound starch synthase I, putative | HC...   108   2e-24
Medtr1g078000.1 | granule bound starch synthase I, putative | HC...   108   2e-24
Medtr2g023320.1 | soluble starch synthase III-1 | HC | chr2:8219...    97   5e-21
Medtr2g023320.2 | soluble starch synthase III-1 | HC | chr2:8219...    97   6e-21
Medtr4g094595.1 | starch synthase IV | HC | chr4:38325533-383339...    86   1e-17

>Medtr3g091570.1 | starch synthase 2/amyloplastic protein | HC |
           chr3:41674619-41682385 | 20130731
          Length = 655

 Score =  275 bits (702), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 130/154 (84%), Positives = 138/154 (89%), Gaps = 5/154 (3%)

Query: 1   MEYDVQFVMLGSGSSIYEDWMRAAESSYRDKFRGWVGFNVPVSHRITAGCDILLMPSIFE 60
           M+ DVQFVMLGSG+ IYEDWMRA ES Y+DKFRGWVGFNVPVSHRITAGCDILLMPS FE
Sbjct: 483 MQDDVQFVMLGSGNPIYEDWMRATESLYKDKFRGWVGFNVPVSHRITAGCDILLMPSTFE 542

Query: 61  PCGLNQLYAMRYGTIPVVHETGGLRDTVQSFNPF-----AEGGNAEGTGWTFSPLSKESM 115
           PCGLNQLYAMRYGTIPVVHETGGLRDTVQ+FNPF     AEG NAEGTGWTFSPL+KESM
Sbjct: 543 PCGLNQLYAMRYGTIPVVHETGGLRDTVQNFNPFAGGSGAEGCNAEGTGWTFSPLTKESM 602

Query: 116 LVGLRHAIKTYTEYKSCWEGLMKRGMNRDYTWVK 149
           LV LR+AI+TY E+KS WEGLMKRGM RDYTW K
Sbjct: 603 LVALRYAIQTYNEHKSSWEGLMKRGMTRDYTWEK 636


>Medtr3g091570.2 | starch synthase 2/amyloplastic protein | HC |
           chr3:41675577-41682385 | 20130731
          Length = 478

 Score =  271 bits (694), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 130/154 (84%), Positives = 138/154 (89%), Gaps = 5/154 (3%)

Query: 1   MEYDVQFVMLGSGSSIYEDWMRAAESSYRDKFRGWVGFNVPVSHRITAGCDILLMPSIFE 60
           M+ DVQFVMLGSG+ IYEDWMRA ES Y+DKFRGWVGFNVPVSHRITAGCDILLMPS FE
Sbjct: 306 MQDDVQFVMLGSGNPIYEDWMRATESLYKDKFRGWVGFNVPVSHRITAGCDILLMPSTFE 365

Query: 61  PCGLNQLYAMRYGTIPVVHETGGLRDTVQSFNPF-----AEGGNAEGTGWTFSPLSKESM 115
           PCGLNQLYAMRYGTIPVVHETGGLRDTVQ+FNPF     AEG NAEGTGWTFSPL+KESM
Sbjct: 366 PCGLNQLYAMRYGTIPVVHETGGLRDTVQNFNPFAGGSGAEGCNAEGTGWTFSPLTKESM 425

Query: 116 LVGLRHAIKTYTEYKSCWEGLMKRGMNRDYTWVK 149
           LV LR+AI+TY E+KS WEGLMKRGM RDYTW K
Sbjct: 426 LVALRYAIQTYNEHKSSWEGLMKRGMTRDYTWEK 459


>Medtr6g012380.1 | granule bound starch synthase | HC |
           chr6:3736016-3743000 | 20130731
          Length = 758

 Score =  181 bits (459), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 84/147 (57%), Positives = 102/147 (69%), Gaps = 4/147 (2%)

Query: 1   MEYDVQFVMLGSGSSIYEDWMRAAESSYRDKFRGWVGFNVPVSHRITAGCDILLMPSIFE 60
           M +DVQ +MLG+G    E+ +R  E  + DK RGWVGF+V ++HRITAG DILLMPS FE
Sbjct: 598 MSHDVQLIMLGTGRPDLEEMLRQFEWQHHDKIRGWVGFSVKMAHRITAGADILLMPSRFE 657

Query: 61  PCGLNQLYAMRYGTIPVVHETGGLRDTVQSFNPFAEGGNAEGTGWTFSPLSKESMLVGLR 120
           PCGLNQLYAM YGT+PVVH  GGLRDTVQ FNPF E     G GWTF       +   L 
Sbjct: 658 PCGLNQLYAMNYGTVPVVHAVGGLRDTVQPFNPFDE----SGVGWTFDRAEANKLKAALW 713

Query: 121 HAIKTYTEYKSCWEGLMKRGMNRDYTW 147
           + I TY +YK  WEG+ +RGM++D +W
Sbjct: 714 NCILTYRDYKKSWEGIQRRGMSQDLSW 740


>Medtr8g024340.2 | granule bound starch synthase | HC |
           chr8:8933201-8938403 | 20130731
          Length = 616

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 6/149 (4%)

Query: 1   MEYDVQFVMLGSGSSIYEDWMRAAESSYRDKFRGWVGFNVPVSHRITAGCDILLMPSIFE 60
           ++ DVQ V LG+G    E  ++  E SY DK RG   FNVP++H I AG D +L+PS FE
Sbjct: 433 IKEDVQIVALGTGKKEMEKQLQQLEISYPDKARGVAKFNVPLAHMIIAGADYILIPSRFE 492

Query: 61  PCGLNQLYAMRYGTIPVVHETGGLRDTVQS-FNPFAEGG-NAEGTGWTFSPLSKESMLVG 118
           PCGL QL AMRYGT+P+V  TGGL DTV+  F  F  G  N E       P   +++   
Sbjct: 493 PCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECDA--VDPADVDALAKT 550

Query: 119 LRHAIKTYTEYKSCWEGLMKRGMNRDYTW 147
           +  A+  Y      +  ++K  M +D +W
Sbjct: 551 VTKALAVYGT--PAFAEMIKNCMAQDLSW 577


>Medtr8g024340.1 | granule bound starch synthase | HC |
           chr8:8933201-8938399 | 20130731
          Length = 616

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 6/149 (4%)

Query: 1   MEYDVQFVMLGSGSSIYEDWMRAAESSYRDKFRGWVGFNVPVSHRITAGCDILLMPSIFE 60
           ++ DVQ V LG+G    E  ++  E SY DK RG   FNVP++H I AG D +L+PS FE
Sbjct: 433 IKEDVQIVALGTGKKEMEKQLQQLEISYPDKARGVAKFNVPLAHMIIAGADYILIPSRFE 492

Query: 61  PCGLNQLYAMRYGTIPVVHETGGLRDTVQS-FNPFAEGG-NAEGTGWTFSPLSKESMLVG 118
           PCGL QL AMRYGT+P+V  TGGL DTV+  F  F  G  N E       P   +++   
Sbjct: 493 PCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECDA--VDPADVDALAKT 550

Query: 119 LRHAIKTYTEYKSCWEGLMKRGMNRDYTW 147
           +  A+  Y      +  ++K  M +D +W
Sbjct: 551 VTKALAVYGT--PAFAEMIKNCMAQDLSW 577


>Medtr1g078000.2 | granule bound starch synthase I, putative | HC |
           chr1:34876696-34871897 | 20130731
          Length = 608

 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 1   MEYDVQFVMLGSGSSIYEDWMRAAESSYRDKFRGWVGFNVPVSHRITAGCDILLMPSIFE 60
           ++ +VQ ++LG+G  I E  +   E +Y DK  G   FN P++H+I AG D +++PS FE
Sbjct: 425 IDQNVQIIVLGTGKKIMEKQIEQLEVTYPDKAIGVAKFNGPLAHKIIAGADFIIIPSRFE 484

Query: 61  PCGLNQLYAMRYGTIPVVHETGGLRDTVQS-FNPFAEGG-NAEGTGWTFSPLSKESMLVG 118
           PCGL QL+AM YGT+P+V  TGGL DTV+  +  F  G  N E    T  P   E +   
Sbjct: 485 PCGLVQLHAMPYGTVPIVSSTGGLVDTVKEGYTGFHAGAFNVECE--TVDPDDVEKLATT 542

Query: 119 LRHAIKTYTEYKSCWEGLMKRGMNRDYTW 147
           +  A+KTY       + +++  M +D++W
Sbjct: 543 VNRALKTYGTL--AMQEIIQNCMAQDFSW 569


>Medtr1g078000.1 | granule bound starch synthase I, putative | HC |
           chr1:34876958-34871801 | 20130731
          Length = 608

 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 1   MEYDVQFVMLGSGSSIYEDWMRAAESSYRDKFRGWVGFNVPVSHRITAGCDILLMPSIFE 60
           ++ +VQ ++LG+G  I E  +   E +Y DK  G   FN P++H+I AG D +++PS FE
Sbjct: 425 IDQNVQIIVLGTGKKIMEKQIEQLEVTYPDKAIGVAKFNGPLAHKIIAGADFIIIPSRFE 484

Query: 61  PCGLNQLYAMRYGTIPVVHETGGLRDTVQS-FNPFAEGG-NAEGTGWTFSPLSKESMLVG 118
           PCGL QL+AM YGT+P+V  TGGL DTV+  +  F  G  N E    T  P   E +   
Sbjct: 485 PCGLVQLHAMPYGTVPIVSSTGGLVDTVKEGYTGFHAGAFNVECE--TVDPDDVEKLATT 542

Query: 119 LRHAIKTYTEYKSCWEGLMKRGMNRDYTW 147
           +  A+KTY       + +++  M +D++W
Sbjct: 543 VNRALKTYGTL--AMQEIIQNCMAQDFSW 569


>Medtr2g023320.1 | soluble starch synthase III-1 | HC |
            chr2:8219703-8232653 | 20130731
          Length = 1109

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 9/151 (5%)

Query: 6    QFVMLGSGSS--IYEDWMRAAE----SSYRDKFRGWVGFNVPVSHRITAGCDILLMPSIF 59
            Q V+LGS     I  D++  A     S Y D+ R  + ++ P+SH I AG D +L+PSIF
Sbjct: 941  QVVLLGSAPDPRIQNDFVHLANQLHSSHYCDRARLCLSYDEPLSHLIYAGADFILVPSIF 1000

Query: 60   EPCGLNQLYAMRYGTIPVVHETGGLRDTVQSFNPFAEGGNAEG---TGWTFSPLSKESML 116
            EPCGL QL AMRYG+IP+V +TGGL DTV   +   +   ++G    G++F       + 
Sbjct: 1001 EPCGLTQLTAMRYGSIPIVRKTGGLYDTVFDVDHDRDRAQSQGLEPNGFSFDGADAGGVD 1060

Query: 117  VGLRHAIKTYTEYKSCWEGLMKRGMNRDYTW 147
              L  AI  + + +  +  L K  M +D++W
Sbjct: 1061 YALNRAISAWYDGREWFNTLCKTVMEQDWSW 1091


>Medtr2g023320.2 | soluble starch synthase III-1 | HC |
           chr2:8219703-8232653 | 20130731
          Length = 925

 Score = 97.1 bits (240), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 9/151 (5%)

Query: 6   QFVMLGSGSS--IYEDWMRAAE----SSYRDKFRGWVGFNVPVSHRITAGCDILLMPSIF 59
           Q V+LGS     I  D++  A     S Y D+ R  + ++ P+SH I AG D +L+PSIF
Sbjct: 757 QVVLLGSAPDPRIQNDFVHLANQLHSSHYCDRARLCLSYDEPLSHLIYAGADFILVPSIF 816

Query: 60  EPCGLNQLYAMRYGTIPVVHETGGLRDTVQSFNPFAEGGNAEG---TGWTFSPLSKESML 116
           EPCGL QL AMRYG+IP+V +TGGL DTV   +   +   ++G    G++F       + 
Sbjct: 817 EPCGLTQLTAMRYGSIPIVRKTGGLYDTVFDVDHDRDRAQSQGLEPNGFSFDGADAGGVD 876

Query: 117 VGLRHAIKTYTEYKSCWEGLMKRGMNRDYTW 147
             L  AI  + + +  +  L K  M +D++W
Sbjct: 877 YALNRAISAWYDGREWFNTLCKTVMEQDWSW 907


>Medtr4g094595.1 | starch synthase IV | HC | chr4:38325533-38333942
           | 20130731
          Length = 988

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 4/150 (2%)

Query: 1   MEYDVQFVMLGSGS--SIYEDWMRAAES-SYRDKFRGWVGFNVPVSHRITAGCDILLMPS 57
           +E   QFV+LGS     I  ++   A      D  R  + ++  +SH I A  D+ ++PS
Sbjct: 816 LELGGQFVLLGSSPVPHIQREFEGIANHFKNHDNIRLILKYDESLSHTIYAASDMFIIPS 875

Query: 58  IFEPCGLNQLYAMRYGTIPVVHETGGLRDTVQSFNPFAEGGNAEGTGWTFSPLSKESMLV 117
           IFEPCGL Q+ +MRYG +P+  +TGGL D+V   +           G+TF    ++ +  
Sbjct: 876 IFEPCGLTQMISMRYGAVPIARKTGGLNDSVFDIDDDTIPSQFR-NGFTFLNADEKGIDG 934

Query: 118 GLRHAIKTYTEYKSCWEGLMKRGMNRDYTW 147
            L  AI  + +    W+ L+++ MN D++W
Sbjct: 935 ALVRAINLFRDDPESWKQLVQKDMNIDFSW 964