Miyakogusa Predicted Gene
- Lj1g3v0948600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0948600.1 Non Characterized Hit- tr|I1JJU8|I1JJU8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90.22,0,SUBFAMILY NOT
NAMED,NULL; CHLOROPHYLL A/B BINDING PROTEIN,Chlorophyll A-B binding
protein, plant; Ch,CUFF.26597.1
(276 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g098785.1 | light-harvesting complex I chlorophyll A/B-bin... 453 e-128
Medtr5g098780.1 | light-harvesting complex I chlorophyll A/B-bin... 438 e-123
Medtr3g101670.1 | light-harvesting complex I chlorophyll A/B-bin... 170 2e-42
Medtr8g023790.1 | light-harvesting complex I chlorophyll A/B-bin... 149 3e-36
Medtr2g042720.1 | light-harvesting complex I chlorophyll A/B-bin... 145 5e-35
Medtr3g435460.1 | light-harvesting complex I chlorophyll A/B-bin... 144 7e-35
Medtr5g098770.1 | light-harvesting complex I chlorophyll A/B-bin... 142 2e-34
Medtr3g435460.2 | light-harvesting complex I chlorophyll A/B-bin... 132 3e-31
Medtr5g097280.1 | light-harvesting complex I chlorophyll A/B-bin... 114 1e-25
Medtr6g033320.1 | light-harvesting complex I chlorophyll A/B-bin... 111 9e-25
Medtr4g094605.1 | light-harvesting complex I chlorophyll A/B-bin... 111 9e-25
Medtr6g011870.1 | light-harvesting complex I chlorophyll A/B-bin... 111 9e-25
Medtr6g011880.1 | light-harvesting complex I chlorophyll A/B-bin... 111 1e-24
Medtr6g012110.1 | light-harvesting complex I chlorophyll A/B-bin... 110 1e-24
Medtr6g011890.1 | light-harvesting complex I chlorophyll A/B-bin... 110 2e-24
Medtr2g081090.2 | light-harvesting complex I chlorophyll A/B-bin... 109 3e-24
Medtr2g081090.1 | light-harvesting complex I chlorophyll A/B-bin... 109 3e-24
Medtr6g012080.1 | light-harvesting complex I chlorophyll A/B-bin... 108 5e-24
Medtr6g060175.1 | light-harvesting complex I chlorophyll A/B-bin... 107 2e-23
Medtr1g026550.1 | light-harvesting complex I chlorophyll A/B-bin... 103 2e-22
Medtr6g060175.2 | light-harvesting complex I chlorophyll A/B-bin... 98 1e-20
Medtr6g043600.1 | light-harvesting complex I chlorophyll A/B-bin... 89 6e-18
Medtr4g015570.1 | light-harvesting complex I chlorophyll A/B-bin... 82 5e-16
Medtr2g008610.1 | light-harvesting complex I chlorophyll A/B-bin... 79 6e-15
Medtr5g098750.1 | type III chlorophyll A/B-binding protein, puta... 66 4e-11
Medtr3g070340.1 | light-harvesting complex I chlorophyll A/B-bin... 64 1e-10
Medtr2g436960.1 | light-harvesting complex I chlorophyll A/B-bin... 59 6e-09
Medtr0003s0060.1 | light-harvesting complex I chlorophyll A/B-bi... 53 3e-07
Medtr6g074140.1 | chlorophyll A/B-binding protein, putative | LC... 50 2e-06
Medtr1g026550.2 | light-harvesting complex I chlorophyll A/B-bin... 49 5e-06
>Medtr5g098785.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43261216-43258628 |
20130731
Length = 277
Score = 453 bits (1166), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/258 (87%), Positives = 236/258 (91%), Gaps = 1/258 (0%)
Query: 20 KQSLGARSLQSPIGSSRKGSFIVKAASTPPVKQ-GANRPLWFASKQSLSYLDGSLPGDFG 78
+QS GARSL S IGSSRKGSF+VKAAS+PPVKQ GANR LWFASKQSLSYLDGSLPGDFG
Sbjct: 20 RQSFGARSLPSSIGSSRKGSFVVKAASSPPVKQNGANRQLWFASKQSLSYLDGSLPGDFG 79
Query: 79 FDPLGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWF 138
FDPLGLSDPEGTGGFIEP+WLAYGEIINGRFAMLGAAGAIAPEILGKAGLIP ETALPWF
Sbjct: 80 FDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWF 139
Query: 139 QTGVIPPAGTYSYWADSYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGS 198
QTGVIPPAGTY+YWAD+YTLFV+EMA MGFAEHRRFQDW PGSMGKQYFLGLEKGLGGS
Sbjct: 140 QTGVIPPAGTYNYWADNYTLFVMEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGLGGS 199
Query: 199 GDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLL 258
G+PAY KDEKS+KELKLKEVKNGRLAMLAILGYFIQ LVTGVGPYQNLL
Sbjct: 200 GEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLL 259
Query: 259 DHLADPVNNNVLTSLKFH 276
DHLADPVNNN+LTSLKFH
Sbjct: 260 DHLADPVNNNILTSLKFH 277
>Medtr5g098780.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43257471-43255552 |
20130731
Length = 275
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/257 (85%), Positives = 230/257 (89%), Gaps = 1/257 (0%)
Query: 20 KQSLGARSLQSPIGSSRKGSFIVKAASTPPVKQGANRPLWFASKQSLSYLDGSLPGDFGF 79
+QS GARSL S IGSSRKGSF+VKAA+ P K GANR LWFASKQSLSYLDGSLPGDFGF
Sbjct: 20 RQSFGARSLPSSIGSSRKGSFVVKAAA-PVKKGGANRQLWFASKQSLSYLDGSLPGDFGF 78
Query: 80 DPLGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWFQ 139
DPLGLSDPEG GGFIEP+WLAYGEIINGRFAMLGAAGAIAPEILGKAGLIP ETALPWFQ
Sbjct: 79 DPLGLSDPEGVGGFIEPEWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQ 138
Query: 140 TGVIPPAGTYSYWADSYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSG 199
TGVIPPAGTY+YWAD+YTLFV+EMA MGFAEHRR QDW PGSMGKQYFLGLEKGLGGSG
Sbjct: 139 TGVIPPAGTYNYWADNYTLFVMEMAFMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLGGSG 198
Query: 200 DPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLD 259
+PAY KDEKS+KELKLKEVKNGRLAMLAILGYFIQ LVTGVGPYQNLLD
Sbjct: 199 EPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLD 258
Query: 260 HLADPVNNNVLTSLKFH 276
HLADPVNNN+LTSLKFH
Sbjct: 259 HLADPVNNNILTSLKFH 275
>Medtr3g101670.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:46810944-46809109 |
20130731
Length = 267
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 137/234 (58%), Gaps = 23/234 (9%)
Query: 47 TPPVKQ----GANRPLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPKWLAY 101
TP KQ RP W +YLDG+LPGDFGFDPLGL DPE KW
Sbjct: 45 TPRCKQICAAAQQRPTWLPGLDPPTYLDGTLPGDFGFDPLGLGEDPESL------KWYVQ 98
Query: 102 GEIINGRFAMLGAAGAIAPEILGKAGLIPEETALP-WFQTGVIPPAGTYSYWADSYTLFV 160
E+++ RFAMLG G + ++L AG+ ++P WF+ G + Y + A++ TL V
Sbjct: 99 AELVHSRFAMLGVLGILVTDLLRVAGV----NSIPIWFEAGAV----KYEF-ANTGTLVV 149
Query: 161 LEMALMGFAEHRRFQDWAKPGSMGKQ-YFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEK 219
+++ LMG+AE RR+ D+ PGS K+ F GLE LGG +P Y KD K
Sbjct: 150 VQLLLMGYAETRRYMDFVSPGSQAKEGSFFGLEASLGGL-EPGYPGGPLLNPLGLAKDIK 208
Query: 220 SMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 273
S +E KLKE+KNGRLAM+AILG F+Q VT VGP NL++HL++P + ++ L
Sbjct: 209 SAREWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQIL 262
>Medtr8g023790.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr8:8653598-8650676 |
20130731
Length = 268
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 129/259 (49%), Gaps = 49/259 (18%)
Query: 32 IGSSRKGSFIVKAASTPPVKQGANRPLWFASKQSLSYLDGSLPGDFGFDPLGLS-DPEGT 90
+ S+ V++ +T +RPLWF +LDGSLPGDFGFDPLGLS DPE
Sbjct: 39 VNSNIAAPVRVRSTTTVCAAAEPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESL 98
Query: 91 GGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWFQTGVIPPAGTYS 150
KW E+++ R+AMLGAAG PE L K G++ + W+ AG
Sbjct: 99 ------KWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPS---WYT------AGEQE 143
Query: 151 YWADSYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG-------------- 196
Y+ D+ TLF++E+ +G+AE RR+ D PG + K G
Sbjct: 144 YFTDTTTLFIVELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPL 203
Query: 197 --GSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPY 254
GSG P + +KEL+ KE+KNGRLAMLA++G + Q + TG GP
Sbjct: 204 GWGSGSP-----------------QKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPI 246
Query: 255 QNLLDHLADPVNNNVLTSL 273
NL HLADP + + +
Sbjct: 247 DNLFAHLADPGHATIFAAF 265
>Medtr2g042720.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:18633760-18631754 |
20130731
Length = 267
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 124/225 (55%), Gaps = 27/225 (12%)
Query: 55 NRPLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEIINGRFAMLG 113
+RPLWF +LDGSLPGDFGFDPLGL SDPE KWLA E+++ R+AMLG
Sbjct: 61 DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELL------KWLAQAELMHARWAMLG 114
Query: 114 AAGAIAPEILGKAGLIPEETALPWFQTGVIPPAGTYSYWADSYTLFVLEMALMGFAEHRR 173
+G + PEIL K G + W+ AG+ Y+AD TLF++++ALMG+ E RR
Sbjct: 115 VSGILIPEILEKIGYV---KNFSWYN------AGSVEYFADPTTLFIVQLALMGWVEGRR 165
Query: 174 FQDWAKPGSMGKQYFLGLEKGLGGSGDP----AYXXXXXXXXXXXXK-DEKSMKELKLKE 228
+ D PGS + +E L +P Y + + + L+ KE
Sbjct: 166 WADIVNPGS------VDIEPKLPNRPNPKPDVGYPGGLWFDPMQWGRGSPEPVMVLRTKE 219
Query: 229 VKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 273
+KNGRLAMLA LG+ Q + G P NL+ HLADP + N+ ++
Sbjct: 220 IKNGRLAMLAFLGFCFQAVYVGGSPIDNLMAHLADPGHVNIFSAF 264
>Medtr3g435460.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:11610138-11613272 |
20130731
Length = 253
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 130/253 (51%), Gaps = 51/253 (20%)
Query: 31 PIGSSRKGSFIVKAASTPPVKQGANRPLWFASKQSLSYLDGSLPGDFGFDPLGLS-DPEG 89
P+G S SF V+A K+G W S YL GSLPGD GFDPLGL+ DPE
Sbjct: 38 PMGCSPSASFKVEA------KKGE----WLPGLASPGYLTGSLPGDNGFDPLGLAEDPEN 87
Query: 90 TGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWFQTGVIPPAGTY 149
KW E++NGR+AMLG AG + PE+ G+I W+ AG
Sbjct: 88 L------KWFVQAELVNGRWAMLGVAGMLLPEVFTNIGII---NVPKWYD------AGKE 132
Query: 150 SYWADSYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGL----GGSGD 200
Y+A S TLFV+E L + E RR+QD PGS+ KQY L KG GG +
Sbjct: 133 EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQY--SLPKGEVGYPGGIFN 190
Query: 201 PAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDH 260
P + E K KE+ NGRLAMLA LG+ IQ VTG GP+ NLL H
Sbjct: 191 PL--------------NFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQH 236
Query: 261 LADPVNNNVLTSL 273
L+DP +N ++ +L
Sbjct: 237 LSDPWHNTIVQTL 249
>Medtr5g098770.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43247918-43247634 |
20130731
Length = 94
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/94 (76%), Positives = 78/94 (82%)
Query: 183 MGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGY 242
MGKQYFLGLEKGLGGSG+PAY KDEKS+K+LKLKEVKNGRLAMLAILGY
Sbjct: 1 MGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGY 60
Query: 243 FIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 276
F+Q LVT VGPYQN L+HLADP NNN+LTSLKFH
Sbjct: 61 FVQALVTRVGPYQNFLNHLADPSNNNILTSLKFH 94
>Medtr3g435460.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:11611493-11613272 |
20130731
Length = 192
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 113/212 (53%), Gaps = 41/212 (19%)
Query: 72 SLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIP 130
SLPGD GFDPLGL+ DPE KW E++NGR+AMLG AG + PE+ G+I
Sbjct: 8 SLPGDNGFDPLGLAEDPENL------KWFVQAELVNGRWAMLGVAGMLLPEVFTNIGII- 60
Query: 131 EETALPWFQTGVIPPAGTYSYWADSYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----K 185
W+ AG Y+A S TLFV+E L + E RR+QD PGS+ K
Sbjct: 61 --NVPKWYD------AGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK 112
Query: 186 QYFLGLEKGL----GGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILG 241
QY L KG GG +P + E K KE+ NGRLAMLA LG
Sbjct: 113 QY--SLPKGEVGYPGGIFNPL--------------NFAPTLEAKEKEIANGRLAMLAFLG 156
Query: 242 YFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 273
+ IQ VTG GP+ NLL HL+DP +N ++ +L
Sbjct: 157 FIIQHNVTGKGPFDNLLQHLSDPWHNTIVQTL 188
>Medtr5g097280.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:42601906-42603573 |
20130731
Length = 265
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 119/229 (51%), Gaps = 39/229 (17%)
Query: 53 GANRPLWFA--SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRF 109
G +RP + S+Q SYL G PGD+G+D GLS DPE F + L E+I+ R+
Sbjct: 51 GPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRW 104
Query: 110 AMLGAAGAIAPEILGKAGLIPEETALPWFQTGV-IPPAGTYSYWADS--------YTLFV 160
AMLGA G PEIL K G+ E WF+ G I G Y + ++
Sbjct: 105 AMLGALGCTFPEILEKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 162
Query: 161 LEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL-GGSGDPAYXXXXXXXXXXXXKDEK 219
++ LMGF E R G +G+ GL+ GG+ DP D
Sbjct: 163 TQVVLMGFVEGYR----VGGGPLGE----GLDPLYPGGAFDP----------LGLADDPD 204
Query: 220 SMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 268
+ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP QNL DH+ADPV NN
Sbjct: 205 AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVQNLYDHVADPVANN 253
>Medtr6g033320.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:10652924-10650230 |
20130731
Length = 242
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 105/215 (48%), Gaps = 33/215 (15%)
Query: 59 WFASKQSLSYLDGSLPGDFGFDPLGLSD-PEGTGGFIEPKWLAYGEIINGRFAMLGAAGA 117
W + SYLDGS PGDFGFDPL L + PE F E E+I+ R+AML G
Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDPLRLGEVPENLERFKE------SELIHCRWAMLAVPGI 102
Query: 118 IAPEILGKAGLIP--EETALPWFQTGVIPPAGTYSYWADSYTLFVLEMALMGFAEHRRFQ 175
+ PE LG + E ALP Q + G W T+ V+E + F EH+R
Sbjct: 103 LVPEALGLGNWVKAQEWAALPGGQATYL---GNPVPWGTLPTILVIEFLSIAFVEHQR-- 157
Query: 176 DWAKPGSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLA 235
SM K +K GG+ DP KD K E K+KEVKNGRLA
Sbjct: 158 ------SMEKDP--EKKKYPGGAFDP----------LGYSKDPKKFHEYKIKEVKNGRLA 199
Query: 236 MLAILGYFIQGLV-TGVGPYQNLLDHLADPVNNNV 269
+LA +G +Q G GP +NL HLADP +NN+
Sbjct: 200 LLAFVGIVVQQTAYPGTGPLENLATHLADPWHNNI 234
>Medtr4g094605.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr4:38356454-38357760 |
20130731
Length = 266
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 131/262 (50%), Gaps = 46/262 (17%)
Query: 21 QSLGARSLQSPIGSSRKGSFIVKAASTPPVKQGANRPLWFA--SKQSLSYLDGSLPGDFG 78
Q LGA + RK + K AS+ G +R + S + SYL G PGD+G
Sbjct: 25 QELGAARF-----TMRKAATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYG 79
Query: 79 FDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPW 137
+D GLS DPE F + + L E+I+ R+AMLGA G + PE+L + G+ E W
Sbjct: 80 WDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--W 131
Query: 138 FQTGV-IPPAGTYSYWADS--------YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYF 188
F+ G I G Y + ++ ++ LMG E R G +G+
Sbjct: 132 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG----GPLGE--- 184
Query: 189 LGLEKGL--GGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGYFIQG 246
+ L GGS DP D ++ ELK+KE+KNGRLAM ++ G+F+Q
Sbjct: 185 --VVDPLYPGGSFDP----------LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQA 232
Query: 247 LVTGVGPYQNLLDHLADPVNNN 268
+VTG GP +NL DHLADPVNNN
Sbjct: 233 IVTGKGPLENLADHLADPVNNN 254
>Medtr6g011870.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3563596-3564681 |
20130731
Length = 265
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 114/217 (52%), Gaps = 35/217 (16%)
Query: 62 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAP 120
S ++ SYL G PGD+G+D GLS DPE F + + L E+I+ R+AMLGA G + P
Sbjct: 62 SGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 115
Query: 121 EILGKAGLIPEETALPWFQTGV-IPPAGTYSYWADS--------YTLFVLEMALMGFAEH 171
E+L + G+ E WF+ G I G Y + ++ +++ LMG E
Sbjct: 116 ELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEG 173
Query: 172 RRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKN 231
R + Y GGS DP +D ++ ELK+KE+KN
Sbjct: 174 YRIAGGPLGEVVDPLY-------PGGSFDP----------LGLAEDPEAFAELKVKELKN 216
Query: 232 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 268
GRLAM ++ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 253
>Medtr6g011880.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3569245-3570411 |
20130731
Length = 265
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 114/217 (52%), Gaps = 35/217 (16%)
Query: 62 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAP 120
S ++ SYL G PGD+G+D GLS DPE F + + L E+I+ R+AMLGA G + P
Sbjct: 62 SGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 115
Query: 121 EILGKAGLIPEETALPWFQTGV-IPPAGTYSYWADS--------YTLFVLEMALMGFAEH 171
E+L + G+ E WF+ G I G Y + ++ +++ LMG E
Sbjct: 116 ELLSRNGVQFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEG 173
Query: 172 RRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKN 231
R + Y GGS DP +D ++ ELK+KE+KN
Sbjct: 174 YRIAGGPLGEVVDPLY-------PGGSFDP----------LGLAEDPEAFAELKVKELKN 216
Query: 232 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 268
GRLAM ++ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 253
>Medtr6g012110.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3585659-3584433 |
20130731
Length = 265
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 118/219 (53%), Gaps = 39/219 (17%)
Query: 62 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAP 120
S ++ SYL G PGD+G+D GLS DPE F + + L E+I+ R+AMLGA G + P
Sbjct: 62 SGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 115
Query: 121 EILGKAGLIPEETALPWFQTGV-IPPAGTYSYWADS--------YTLFVLEMALMGFAEH 171
E+L + G+ E WF+ G I G Y + ++ +++ LMG E
Sbjct: 116 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEG 173
Query: 172 RRFQDWAKPGSMGKQYFLGLEKGL--GGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEV 229
R G +G+ + L GGS DP +D ++ ELK+KE+
Sbjct: 174 YRIAG----GPLGE-----VVDPLYPGGSFDP----------LGLAEDPEAFAELKVKEL 214
Query: 230 KNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 268
KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPVNNN
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLKNLADHIADPVNNN 253
>Medtr6g011890.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3572293-3573452 |
20130731
Length = 265
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 113/217 (52%), Gaps = 35/217 (16%)
Query: 62 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAP 120
S ++ SYL G PGD+G+D GLS DPE F + + L E+I+ R+AMLGA G + P
Sbjct: 62 SGEAPSYLTGEFPGDYGWDTAGLSADPET---FSKNREL---EVIHSRWAMLGALGCVFP 115
Query: 121 EILGKAGLIPEETALPWFQTGV-IPPAGTYSYWADS--------YTLFVLEMALMGFAEH 171
E+L + G+ E WF+ G I G Y + ++ +++ LMG E
Sbjct: 116 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEG 173
Query: 172 RRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKN 231
R + Y GGS DP D ++ ELK+KE+KN
Sbjct: 174 YRIAGGPLGEVVDPLY-------PGGSFDP----------LGLADDPEAFAELKVKELKN 216
Query: 232 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 268
GRLAM ++ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 253
>Medtr2g081090.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:33993824-33992362 |
20130731
Length = 237
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 111/217 (51%), Gaps = 33/217 (15%)
Query: 62 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAP 120
S Q+ SYL G PGD+G+D GLS DPE F + + L E+I+GR+AMLGA G I P
Sbjct: 32 SAQTPSYLTGEFPGDYGWDTAGLSADPEA---FAKNRAL---EVIHGRWAMLGALGCITP 85
Query: 121 EILGKAGLIPEETALPWFQTGV-IPPAGTYSYWAD------SYTLFVL--EMALMGFAEH 171
E+L K + + + WF+ G I G Y + L VL ++ LMG E
Sbjct: 86 EVLEKWVRVDFKEPV-WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEG 144
Query: 172 RRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKN 231
R PG G G+ Y D + ELK+KE+KN
Sbjct: 145 FRIN--GLPGV--------------GEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKN 188
Query: 232 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 268
GRLAM ++ G+F+Q +VTG GP +NLLDH+ +PV NN
Sbjct: 189 GRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANN 225
>Medtr2g081090.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:33993832-33992362 |
20130731
Length = 264
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 111/217 (51%), Gaps = 33/217 (15%)
Query: 62 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAP 120
S Q+ SYL G PGD+G+D GLS DPE F + + L E+I+GR+AMLGA G I P
Sbjct: 59 SAQTPSYLTGEFPGDYGWDTAGLSADPEA---FAKNRAL---EVIHGRWAMLGALGCITP 112
Query: 121 EILGKAGLIPEETALPWFQTGV-IPPAGTYSYWAD------SYTLFVL--EMALMGFAEH 171
E+L K + + + WF+ G I G Y + L VL ++ LMG E
Sbjct: 113 EVLEKWVRVDFKEPV-WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEG 171
Query: 172 RRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKN 231
R PG G G+ Y D + ELK+KE+KN
Sbjct: 172 FRIN--GLPGV--------------GEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKN 215
Query: 232 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 268
GRLAM ++ G+F+Q +VTG GP +NLLDH+ +PV NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANN 252
>Medtr6g012080.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3575571-3576676 |
20130731
Length = 265
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 112/217 (51%), Gaps = 35/217 (16%)
Query: 62 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAP 120
S ++ SYL G PGD+G+D GLS DPE F + + L E+I+ R+AMLGA G + P
Sbjct: 62 SGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 115
Query: 121 EILGKAGLIPEETALPWFQTGV-IPPAGTYSYWADS--------YTLFVLEMALMGFAEH 171
E+L + G+ E WF+ G I G Y + ++ +++ LMG E
Sbjct: 116 ELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEG 173
Query: 172 RRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKN 231
R + Y GGS DP D ++ ELK+KE+KN
Sbjct: 174 YRIAGGPLGEVVDPLY-------PGGSFDP----------LGLADDPEAFAELKVKELKN 216
Query: 232 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 268
GRLAM ++ G+F+Q +VTG GP +NL DH+ DPVNNN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHITDPVNNN 253
>Medtr6g060175.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:20668553-20672457 |
20130731
Length = 289
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 110/216 (50%), Gaps = 37/216 (17%)
Query: 67 SYLDGSLPGDFGFDPLGLSD-PEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGK 125
YL G +PGD+G+DP GLS PE K+ Y E+I+ R+AMLGAAG I PE K
Sbjct: 92 EYLTGEVPGDYGYDPFGLSKKPEDFA-----KYQGY-ELIHARWAMLGAAGFIIPEAFNK 145
Query: 126 AGLIPEETALPWFQTG-VIPPAGTYSYWADSYTLFVLEMALM-----GFAEHRRFQDWAK 179
G A+ WF+TG ++ GT +Y+ + ++ + G AE+ R +
Sbjct: 146 YGANCGPEAV-WFKTGALLLDGGTLNYFGKPIPINLIVAVVAEVVLLGGAEYYRITNG-- 202
Query: 180 PGSMGKQYFLGLEKGL--GGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAML 237
L LE GG DP D LK+KE+KNGRLAM
Sbjct: 203 ---------LELEDKFHPGGPFDP----------LGLANDPDQAAILKVKEIKNGRLAMF 243
Query: 238 AILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 273
A+LG+FIQ VTG GP +NL HL+DP NN+LT +
Sbjct: 244 AMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVI 279
>Medtr1g026550.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr1:8659686-8663216 |
20130731
Length = 333
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 130/272 (47%), Gaps = 44/272 (16%)
Query: 26 RSLQSPIGSSRKGSFIVKAASTPPVKQ----GANRPLWF---ASKQSLSYLDGSLPGDFG 78
R ++ + K S KA + KQ G RP W + SYL G LPGD+G
Sbjct: 78 RKMEETKQLAVKNSSKFKAQAAKARKQSFWYGQGRPRWLGPISYDGYPSYLHGELPGDYG 137
Query: 79 FDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPW 137
FD GL+ DP +E + EI++ R+AML + GA+ PE+L G+ + W
Sbjct: 138 FDIAGLAKDP------VELQKYFNFEILHARWAMLASVGALIPELLDLLGVFHFVEPV-W 190
Query: 138 FQTGVIPPAG-TYSYW-------ADSYTLFVLEMA---LMGFAEHRRFQDWAKPGSMGKQ 186
++ G G T Y A S + V+ + LM E+ R+
Sbjct: 191 WRVGYSKLQGDTLDYLGIPGLHLAGSQGVVVIAICQALLMVGPEYARY------------ 238
Query: 187 YFLGLEK----GLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGY 242
G+E G+ GD Y KD ++ +ELK+KE+KNGRLAM+A LG+
Sbjct: 239 --CGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMMAWLGF 296
Query: 243 FIQGLVTGVGPYQNLLDHLADPVNNNVLTSLK 274
F Q +TG GP QN++DH+ DP +NN+L SL
Sbjct: 297 FTQAALTGKGPVQNIVDHIYDPFHNNLLGSLN 328
>Medtr6g060175.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:20668922-20672420 |
20130731
Length = 279
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 105/215 (48%), Gaps = 45/215 (20%)
Query: 67 SYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKA 126
YL G +PGD+G+DP GLS +P+ A ++AMLGAAG I PE K
Sbjct: 92 EYLTGEVPGDYGYDPFGLSK--------KPEDFA-------KWAMLGAAGFIIPEAFNKY 136
Query: 127 GLIPEETALPWFQTG-VIPPAGTYSYWADSYTLFVLEMALM-----GFAEHRRFQDWAKP 180
G A+ WF+TG ++ GT +Y+ + ++ + G AE+ R +
Sbjct: 137 GANCGPEAV-WFKTGALLLDGGTLNYFGKPIPINLIVAVVAEVVLLGGAEYYRITNG--- 192
Query: 181 GSMGKQYFLGLEKGL--GGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLA 238
L LE GG DP D LK+KE+KNGRLAM A
Sbjct: 193 --------LELEDKFHPGGPFDP----------LGLANDPDQAAILKVKEIKNGRLAMFA 234
Query: 239 ILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 273
+LG+FIQ VTG GP +NL HL+DP NN+LT +
Sbjct: 235 MLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVI 269
>Medtr6g043600.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:13275588-13276379 |
20130731
Length = 229
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 100/206 (48%), Gaps = 37/206 (17%)
Query: 64 QSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEI 122
++ SYL G PGD+G++ GLS DPE F + + L E+I+ R+AM +I
Sbjct: 48 EAPSYLTGEFPGDYGWNTAGLSADPET---FAKNREL---EVIHSRWAMFDRWFKARSQI 101
Query: 123 LGKAGLIPEETALPWFQTGVIPPAGTYSYWADSYTLFVLEMALMGFAEHRRFQDWAKPGS 182
+ GL + P ++ + WA ++ LMG E R
Sbjct: 102 FSEGGL--DYLGNP----SLVHAQSILAIWA-------CQVILMGAVEGYRIAGGPLGEV 148
Query: 183 MGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGY 242
+ Y GGS DP D ++ ELK+KE+KNGRLAM ++ G+
Sbjct: 149 IDPLY-------PGGSFDP----------LGLADDPEAFVELKVKEIKNGRLAMFSMFGF 191
Query: 243 FIQGLVTGVGPYQNLLDHLADPVNNN 268
F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 192 FVQAIVTGKGPLENLADHLADPVNNN 217
>Medtr4g015570.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr4:4673903-4671256 |
20130731
Length = 289
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 108/265 (40%), Gaps = 75/265 (28%)
Query: 54 ANRPLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGF-------------------- 93
+RPLWF +S +LDGSL GD+GFDP GL P F
Sbjct: 52 TDRPLWFPGAKSPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGT 111
Query: 94 -----------IEPKWLAYG-------EIINGRFAMLGAAGAIAPEILGKAGLIPEETAL 135
+P +G E+I+GR+AML GA+ E L T +
Sbjct: 112 RTEFADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWL---------TGV 162
Query: 136 PWFQTGVIPPAGTYSYWADSY-----TLFVLEMALMGFAEHRRFQDWAKPGSM--GKQYF 188
W G + +Y TL +E+ ++G+ E +R + + G ++F
Sbjct: 163 TWQDAGKVELVEGSTYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFF 222
Query: 189 LGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLV 248
LG + DP + L+L E+K+ RLAM+A LG+ +Q
Sbjct: 223 ----DPLGLASDP-----------------EKKATLQLAEIKHARLAMVAFLGFAVQAAA 261
Query: 249 TGVGPYQNLLDHLADPVNNNVLTSL 273
TG GP N HL+DP++ ++ +
Sbjct: 262 TGKGPLNNWATHLSDPLHTTIIDTF 286
>Medtr2g008610.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:1552950-1554469 |
20130731
Length = 261
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 34/193 (17%)
Query: 68 YLDGSLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKA 126
+LDGSLPGDFGFDPLGL DP F+ KW E+I+GR+AM G +G+A
Sbjct: 75 WLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVLGI----FVGQA 124
Query: 127 GLIPEETALPWFQTGVIPPA-GTYSYWADSYTLFVLEMALMGFAEHRRFQD--------- 176
+ +PWF+ G P A +S+ TL ++ LMG+ E +R+ D
Sbjct: 125 -----WSGVPWFEAGADPNAIAPFSF----GTLLGTQLILMGWVESKRWVDFFNPDSQSI 175
Query: 177 -WAKPGSMGKQYFLGL--EKGL-GGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNG 232
WA P S + F E+G GG D + ++ LKL E+K+
Sbjct: 176 EWATPWSKTAENFANATGEQGYPGGKFFDPLSLAGTIENGVYIPDTEKLERLKLAEIKHA 235
Query: 233 RLAMLAILGYFIQ 245
RLAMLA+L ++ +
Sbjct: 236 RLAMLAMLIFYFE 248
>Medtr5g098750.1 | type III chlorophyll A/B-binding protein,
putative | LC | chr5:43234745-43233903 | 20130731
Length = 120
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 36/50 (72%)
Query: 222 KELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLT 271
KE+ E+K ++ ILG F+Q LVTGVGPYQNLLDHLADP NNN+
Sbjct: 53 KEVSFFELKCKFECLMEILGDFVQSLVTGVGPYQNLLDHLADPFNNNIFV 102
>Medtr3g070340.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:31536436-31533674 |
20130731
Length = 278
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 103/247 (41%), Gaps = 75/247 (30%)
Query: 52 QGANRPLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGF------------------ 93
Q ++ +WF Q +LDG++ GD GFDPLGL+ P F
Sbjct: 53 QESDGLVWFPGAQPPEWLDGTMIGDRGFDPLGLAKPVEYLQFDLDSLDQNLAKNLAGDII 112
Query: 94 -------------IEPKWLAYG-------EIINGRFAMLGAAGAIAPEILGKAGLIPEET 133
+P +G E+I+GR+AMLGA GA+A E T
Sbjct: 113 GTRVESTDVNPTPFQPYTEVFGIQRFRECEVIHGRWAMLGALGALAVEAF---------T 163
Query: 134 ALPWFQTGVIPPAGTYSYWADSY-----TLFVLEMALMGFAEHRRFQDWAKPGSM--GKQ 186
+ W G + SY+ S TL +E+ ++G+ E +R + + G +
Sbjct: 164 GVAWQDAGKVELVEGSSYFGFSLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK 223
Query: 187 YFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGYFIQG 246
+F LG + DP +EK + L+L E+K+ RLAM+ L + IQ
Sbjct: 224 FF----DPLGLASDP---------------EEK--ERLQLAEIKHSRLAMVVFLIFAIQA 262
Query: 247 LVTGVGP 253
VTG GP
Sbjct: 263 AVTGKGP 269
>Medtr2g436960.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:14456001-14454918 |
20130731
Length = 102
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 223 ELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 273
E K KE+ NGRLAMLA LG+ Q VTG G + NLL+HL+DP +N ++ +L
Sbjct: 48 EAKEKEISNGRLAMLAFLGFISQHNVTGKGRFDNLLEHLSDPWHNTIVQTL 98
>Medtr0003s0060.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | scaffold0003:35090-34151 |
20130731
Length = 95
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 223 ELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 273
E K KE+ NGRLA+LA LG+ Q V G G + NLL HL+DP +N ++ +L
Sbjct: 41 EAKEKEISNGRLALLAFLGFISQHKVAGKGRFDNLLQHLSDPWHNIIVQTL 91
>Medtr6g074140.1 | chlorophyll A/B-binding protein, putative | LC |
chr6:27445694-27446574 | 20130731
Length = 104
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 223 ELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 273
E K KE+ N AMLA LG+ Q VTG G + NLL HL+DP +N ++ +L
Sbjct: 50 EAKEKEISNVIFAMLAFLGFISQHSVTGKGRFDNLLQHLSDPWHNTIVQTL 100
>Medtr1g026550.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr1:8659686-8662520 |
20130731
Length = 241
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 26 RSLQSPIGSSRKGSFIVKAASTPPVKQ----GANRPLWF---ASKQSLSYLDGSLPGDFG 78
R ++ + K S KA + KQ G RP W + SYL G LPGD+G
Sbjct: 78 RKMEETKQLAVKNSSKFKAQAAKARKQSFWYGQGRPRWLGPISYDGYPSYLHGELPGDYG 137
Query: 79 FDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGL 128
FD GL+ DP + EI++ R+AML + GA+ PE+L G+
Sbjct: 138 FDIAGLAKDPVELQKYFN------FEILHARWAMLASVGALIPELLDLLGV 182