Miyakogusa Predicted Gene

Lj1g3v0948590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0948590.1 Non Characterized Hit- tr|H9VTY4|H9VTY4_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,69.49,1e-17,Bac_globin,Globin, truncated bacterial-like; no
description,Globin, structural domain,CUFF.26551.1
         (168 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g008700.1 | 2-on-2 hemoglobin | HC | chr1:1027028-1030563 ...   311   3e-85
Medtr3g109420.1 | 2-on-2 hemoglobin | HC | chr3:50607646-5060926...   270   4e-73

>Medtr1g008700.1 | 2-on-2 hemoglobin | HC | chr1:1027028-1030563 |
           20130731
          Length = 169

 Score =  311 bits (796), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 146/169 (86%), Positives = 159/169 (94%), Gaps = 1/169 (0%)

Query: 1   MQSLQHKASEWSGVPSDEAFAIDDTNLFLKLGLQTFINLSTNFYNRVYDDDEE-WFRSIF 59
           MQSLQ KASEWSGV +DEAF+ID+TNLF KLGLQTFINLSTNFYNRVYDD+EE WFRSIF
Sbjct: 1   MQSLQQKASEWSGVSTDEAFSIDETNLFQKLGLQTFINLSTNFYNRVYDDEEEEWFRSIF 60

Query: 60  ADSEKQNAIQNQYEFFVQRMGGPPLFSQRRGHPALIGRHRPFPVTHEAAERWLHHMQQAL 119
           A+S+K+ AIQNQYEFFVQRMGGPPLFSQRRGHPALIGRH+PFPVTH+AAERWLHHMQ AL
Sbjct: 61  ANSKKEEAIQNQYEFFVQRMGGPPLFSQRRGHPALIGRHQPFPVTHQAAERWLHHMQLAL 120

Query: 120 DSTPDIDDDSKIKMQNFFRHTAYFLVAGNELKKQNEQMPCKHAAGSDNS 168
           D+TPDIDDDSKIKM NFFRHTAYFLVAG+ELK  N+Q+PCKHAAG DNS
Sbjct: 121 DTTPDIDDDSKIKMMNFFRHTAYFLVAGDELKNPNQQIPCKHAAGKDNS 169


>Medtr3g109420.1 | 2-on-2 hemoglobin | HC | chr3:50607646-50609269 |
           20130731
          Length = 170

 Score =  270 bits (690), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 132/164 (80%), Positives = 140/164 (85%), Gaps = 1/164 (0%)

Query: 1   MQSLQHKASEWSGVPSDEAFAIDDTNLFLKLGLQTFINLSTNFYNRVYDDDEEWFRSIFA 60
           MQ+LQ KASEWSGV ++ AFAIDDTNLF KLGLQTFINLSTNFYNRVY DDEEWFRSIFA
Sbjct: 1   MQNLQEKASEWSGVETNHAFAIDDTNLFQKLGLQTFINLSTNFYNRVYVDDEEWFRSIFA 60

Query: 61  DSEKQNAIQNQYEFFVQRMGGPPLFSQRRGHPALIGRHRPFPVTHEAAERWLHHMQQALD 120
            S+K  AIQNQYEF VQRMGGPPL+SQRRGHPALI RHRPFPVTHEAAERWL HMQQALD
Sbjct: 61  KSDKDKAIQNQYEFLVQRMGGPPLYSQRRGHPALIARHRPFPVTHEAAERWLLHMQQALD 120

Query: 121 STPDIDDDSKIKMQNFFRHTAYFLVAGNELKKQNEQMPCKHAAG 164
           +  DID DSKI + NFFRHTAYFLVAG E K Q+   PCK A G
Sbjct: 121 NISDIDHDSKIMLMNFFRHTAYFLVAGVEQKNQSLH-PCKDADG 163