Miyakogusa Predicted Gene

Lj1g3v0948530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0948530.1 Non Characterized Hit- tr|K4CPJ6|K4CPJ6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.15,1e-17,coiled-coil,NULL; seg,NULL,CUFF.26558.1
         (626 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g028880.1 | hypothetical protein | LC | chr1:9829942-98271...   255   9e-68
Medtr1g028620.1 | hypothetical protein | HC | chr1:9709082-97059...   239   8e-63
Medtr1g028850.1 | hypothetical protein | LC | chr1:9814660-98126...   118   2e-26
Medtr1g028700.1 | hypothetical protein | HC | chr1:9756192-97554...    53   8e-07

>Medtr1g028880.1 | hypothetical protein | LC | chr1:9829942-9827101
           | 20130731
          Length = 574

 Score =  255 bits (652), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 174/361 (48%), Positives = 221/361 (61%), Gaps = 32/361 (8%)

Query: 286 VPHRQGSGNILISTSFAAGNGKNSHSSCAQNNEENLDFSEEPLFVANTKRKRTCNVVTSE 345
           V   QGS    +ST  AA  GKN +S+  Q+NEE+ DF E+ L     KRKRT NV  SE
Sbjct: 226 VSDMQGSQCNSLSTCSAAEKGKNLYSNYDQSNEEDSDFVEDLLCAVIPKRKRTRNVFISE 285

Query: 346 SESDDEDNMPISKLKRIHIQEASADQVRHGSNSSLTATISEDDKF-------TDNVKRRR 398
            E+DD+D  PISKL R  +QE SAD++ +  +        +DD              RRR
Sbjct: 286 YENDDDDK-PISKLIRNRVQERSADELVNVVDDDGDDGDDDDDDMLISQLVRRKEESRRR 344

Query: 399 RLQPLSKCLSKHQEEKSSSRPHRAKHQRRVPRNDDADDDQSIEDLSYSEGESMSNFIVND 458
           R +PL KC++K  ++K         +Q+ +P NDDA   +SIEDLS SE  +   FIV+D
Sbjct: 345 RRRPLRKCVTKSHDDK-------VNYQQSIPTNDDA---ESIEDLSQSEEGNSKGFIVDD 394

Query: 459 SDVSDSGDTFSKSEDGS-NGDVDTASSNLQDVSDGE------------MNFGEILSKIRR 505
            DVS    T SKS+DG  NGDVD+  +NLQD+ D              +N  +I SKI+R
Sbjct: 395 FDVSSCEVTSSKSQDGGHNGDVDSDLNNLQDLQDHSKDSDSSDASDEGINLSKIYSKIQR 454

Query: 506 SKNNNEMKWEYEGDMLAAFGKDPELCMKAVCSLYRQQTSEEQMSKEAIYQNNRGFSKFDA 565
            K + ++KWE E DM A FGKD  LCMKAVC L+RQQT EEQ +   + +N RGFS FDA
Sbjct: 455 KKKH-KIKWESEVDMCADFGKDQVLCMKAVCVLFRQQTPEEQTNFVTLNRNGRGFSSFDA 513

Query: 566 HRGSALAEFLTDGDPSSGLKKSVEDLQEYDPKAVELCRTLAIRYSKQLYEIYKNNEDPFF 625
            RGS LA FLT G+P  GLKK+VE+LQ++D + VE C TLA  YSKQL+EI+KN EDPFF
Sbjct: 514 DRGSTLAYFLTGGNPYGGLKKTVEELQKFDSEGVETCETLAFNYSKQLHEIFKNKEDPFF 573

Query: 626 P 626
           P
Sbjct: 574 P 574



 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/205 (44%), Positives = 112/205 (54%), Gaps = 27/205 (13%)

Query: 292 SGNILISTSFAAGNGKNSHSSCAQNNEENLDFSEEPLFVANTKRKRTCNVVTSESESDDE 351
           S NI +ST F    GKN  ++ +QNNEENLDF E+ LF ANTKRKR  NVV SESES   
Sbjct: 46  SHNISLSTCFGEVKGKNLDNNHSQNNEENLDFGEDILFSANTKRKRNSNVVMSESES--- 102

Query: 352 DNMPISKLKRIHIQEASADQVRHGSNSSLTATISEDDKFTDNVKRRRRLQPLSKCLSKHQ 411
                             D      N+SLT    E DK  D  + RRRLQ L K  SK Q
Sbjct: 103 ----------------DHDDDDDDMNNSLTTANLEVDKVVDTQRPRRRLQTLRKLESKSQ 146

Query: 412 -EEKSSSRPHRAKHQRRVPRNDDADDDQSIEDLSYSEGESMSNFIVNDSDVSDSGDTFSK 470
            +E SS R H+ KH + +P N   DDD+  ED +YSE  +  +FI +D D SD  D  + 
Sbjct: 147 NDEISSGRHHKGKHLQSIPTN---DDDELEEDSTYSEEGNNIDFIGDDFDASDCEDMSNN 203

Query: 471 SEDGSNGDVDTAS----SNLQDVSD 491
           S DGSN D ++ +    SN QDVSD
Sbjct: 204 SLDGSNSDAESNTSNKNSNFQDVSD 228


>Medtr1g028620.1 | hypothetical protein | HC | chr1:9709082-9705975
           | 20130731
          Length = 582

 Score =  239 bits (609), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 160/365 (43%), Positives = 223/365 (61%), Gaps = 40/365 (10%)

Query: 289 RQGSGNILISTSFAAGNGKNSHSSCAQNNEENLDFSEEPLFVANTKRKRTCNVV-TSESE 347
           RQGSGNI +ST   A  G++S S+ AQ +EEN D  E+       KRK+  NVV +    
Sbjct: 229 RQGSGNISLSTCTVAERGEDSKSNYAQKSEENSDLGEDYSCTVVPKRKQARNVVLSESEN 288

Query: 348 SDDEDNMPISKLKRIHIQEASADQVRHGSNSSLTATISEDDK-----FTDNVKR----RR 398
            D++D++PISKL R H++E S D + +  + +      +DD       +  +++    RR
Sbjct: 289 DDEDDDLPISKLIRKHVEEVSVDDLVNAVDDAAADIDDDDDDDDDMPISQVIRKKKASRR 348

Query: 399 RLQPLSKCLSKHQEEKSSSRPHRAKHQRRVPRNDDA-----DDDQSIEDLSYSEGESMSN 453
           RL+ L+KC+SK  ++K+S            P N+DA     DD++  ED+S SEGE++S 
Sbjct: 349 RLKRLTKCVSKSNDDKTS---------LCFPTNNDAHDDDDDDEELEEDISNSEGENLSG 399

Query: 454 FIVNDSDVSDSGDTFSKSEDGSNGDVDTASSNL-------------QDVSDGEMNFGEIL 500
           FIV+DSDVS+     +KS+D  NGD D+  SN+             QDVSDGE++  +IL
Sbjct: 400 FIVDDSDVSEINS--NKSQDECNGDADSDDSNISQDLPDHSKDSDSQDVSDGEIDLVKIL 457

Query: 501 SKIRRSKNNNEMKWEYEGDMLAAFGKDPELCMKAVCSLYRQQTSEEQMSKEAIYQNNRGF 560
           SKI+R K   ++KWE E DML  FG D  LCMKAVC LYRQ+   +Q  +E   ++ RGF
Sbjct: 458 SKIKREKGQ-KIKWEDEHDMLKEFGNDAVLCMKAVCVLYRQEVLGDQRYEETFGRDGRGF 516

Query: 561 SKFDAHRGSALAEFLTDGDPSSGLKKSVEDLQEYDPKAVELCRTLAIRYSKQLYEIYKNN 620
           S+ D  RG AL  FLTD  P  GLKK+VE+L+EY+P+ V+ C TLA +YSKQ++EI+KN 
Sbjct: 517 SRHDTARGCALGRFLTDDSPYDGLKKTVEELEEYNPEGVKTCGTLAFKYSKQIFEIFKNK 576

Query: 621 EDPFF 625
           EDP F
Sbjct: 577 EDPNF 581



 Score =  157 bits (397), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/211 (47%), Positives = 134/211 (63%), Gaps = 25/211 (11%)

Query: 282 SHDPVPHRQGSGNILISTSFAAGNGKNSHSSCAQNNEENLDFSEEPLFVANTKRKRTCNV 341
           SH+    RQGSG I ++T FA   GKN  ++ AQNN+E LDF E+ LF ANTKRKR CNV
Sbjct: 30  SHNISLDRQGSGKISLATCFAKEEGKNLDNNHAQNNKEKLDFGEDILFTANTKRKRPCNV 89

Query: 342 VTSESESDDEDNMPISKLKRIHIQEASADQVRHGSNSSLTATISEDDKFTDNVKRRRRLQ 401
           V SESESD +D+                     G ++S+T+   E DK TD+   RRRLQ
Sbjct: 90  VMSESESDQDDD---------------------GMSNSVTSANLEVDKVTDSQMPRRRLQ 128

Query: 402 PLSKCLSKHQEEK-SSSRPHRAKHQRRVPRNDDADDDQSIEDLSYSEGESMSNFIVNDSD 460
            L K +SK+++ K SS RPH+ K+Q+ +P+ND  DDD  + DLSYSE +++S+FIV+D D
Sbjct: 129 TLRKLVSKNRDNKMSSVRPHKVKYQQSIPKND--DDDLGV-DLSYSEEDNLSDFIVDDVD 185

Query: 461 VSDSGDTFSKSEDGSNGDVDTASSNLQDVSD 491
            SD  D   KS++ SN D+D  SS+ QD+ D
Sbjct: 186 ASDCEDISDKSQEESNSDLDANSSSSQDLQD 216


>Medtr1g028850.1 | hypothetical protein | LC | chr1:9814660-9812639
           | 20130731
          Length = 281

 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 74/111 (66%), Gaps = 5/111 (4%)

Query: 497 GEILSKIRRSKNNNEMKWEYEGDMLAAFGKDPELCMKAVCSLYRQQTSEEQMSKEAIYQN 556
           G+ +SKI + +  +++KWE E +M A FGKDP LCMKAVC L+R QTSEEQM+   +   
Sbjct: 169 GKCVSKILKPQKKHKIKWESEVEMRADFGKDPVLCMKAVCVLFRHQTSEEQMNFVTLSPE 228

Query: 557 NRGFSKFDAHRGSALAEFLTDGDPSSGLKKSVEDLQEYDPKAVELCRTLAI 607
            RG S  DA R      FL DG+P  GLKK+VE+LQ++D   VE CRTLA 
Sbjct: 229 GRGLSSCDASRN-----FLIDGNPYGGLKKTVEELQKFDSDGVETCRTLAF 274


>Medtr1g028700.1 | hypothetical protein | HC | chr1:9756192-9755477
           | 20130731
          Length = 184

 Score = 53.1 bits (126), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 412 EEKSSSRPHRAKHQRRVPRNDDADDDQSIEDLSYSEGESMSNFIVNDSDVSDSGDTFSKS 471
           +E SS R H+ KH R    NDD   D+  EDL+YSE  +M++FIV+D D SD     + S
Sbjct: 25  DEISSGRRHKGKHWRSFSTNDD---DELEEDLTYSEEGNMNDFIVDDFDASDCEGMSNTS 81

Query: 472 EDGSNGDVDTASSNL 486
           +D SN D +    NL
Sbjct: 82  QDESNSDAELLGKNL 96