Miyakogusa Predicted Gene

Lj1g3v0948490.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0948490.2 Non Characterized Hit- tr|K4CPJ6|K4CPJ6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.44,3e-18,seg,NULL,CUFF.26552.2
         (393 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g028880.1 | hypothetical protein | LC | chr1:9829942-98271...   263   3e-70
Medtr1g028620.1 | hypothetical protein | HC | chr1:9709082-97059...   223   3e-58
Medtr1g028850.1 | hypothetical protein | LC | chr1:9814660-98126...   123   3e-28

>Medtr1g028880.1 | hypothetical protein | LC | chr1:9829942-9827101
           | 20130731
          Length = 574

 Score =  263 bits (671), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 171/361 (47%), Positives = 220/361 (60%), Gaps = 33/361 (9%)

Query: 54  VPDRQASGNIFISTSFAAEKGKNSHGSCAQNNEENLDFSEEPLFVANTKRKRTCNVVTSE 113
           V D Q S    +ST  AAEKGKN + +  Q+NEE+ DF E+ L     KRKRT NV  SE
Sbjct: 226 VSDMQGSQCNSLSTCSAAEKGKNLYSNYDQSNEEDSDFVEDLLCAVIPKRKRTRNVFISE 285

Query: 114 SESDDDNLPISQLKRTHIQKASADRVA--------MSEDSSLPAAISEDDKVTDNVKIRR 165
            E+DDD+ PIS+L R  +Q+ SAD +           +D      IS+   V    + RR
Sbjct: 286 YENDDDDKPISKLIRNRVQERSADELVNVVDDDGDDGDDDDDDMLISQ--LVRRKEESRR 343

Query: 166 RRLQPLRECLSKIHNDKMSSRRRHRAKHQQSVPANND-QSVEDLSDGEEESTGXXXXXXX 224
           RR +PLR+C++K H+DK++        +QQS+P N+D +S+EDLS  EE ++        
Sbjct: 344 RRRRPLRKCVTKSHDDKVN--------YQQSIPTNDDAESIEDLSQSEEGNS--KGFIVD 393

Query: 225 XXXXXXCEVTCSKSSRDEFNSDVDSASSNLQDVSDGE------------MNFGKILSKIQ 272
                 CEVT SKS     N DVDS  +NLQD+ D              +N  KI SKIQ
Sbjct: 394 DFDVSSCEVTSSKSQDGGHNGDVDSDLNNLQDLQDHSKDSDSSDASDEGINLSKIYSKIQ 453

Query: 273 RRKKNAMKWEYQADMLAEFGKDSELCMKAVCSLYKQQTSEEQMSKESMCHNNRGFSKCDA 332
           R+KK+ +KWE + DM A+FGKD  LCMKAVC L++QQT EEQ +  ++  N RGFS  DA
Sbjct: 454 RKKKHKIKWESEVDMCADFGKDQVLCMKAVCVLFRQQTPEEQTNFVTLNRNGRGFSSFDA 513

Query: 333 PRGSDLGEYLTEGDPSGGLKKSVEELQEYDPEAVEECRTLATRYSKQLYEIYKNNEDPFF 392
            RGS L  +LT G+P GGLKK+VEELQ++D E VE C TLA  YSKQL+EI+KN EDPFF
Sbjct: 514 DRGSTLAYFLTGGNPYGGLKKTVEELQKFDSEGVETCETLAFNYSKQLHEIFKNKEDPFF 573

Query: 393 P 393
           P
Sbjct: 574 P 574



 Score =  125 bits (315), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/231 (43%), Positives = 121/231 (52%), Gaps = 33/231 (14%)

Query: 33  KSTPGSVIDISDSDDEPTQDPVPDRQASGNIFISTSFAAEKGKNSHGSCAQNNEENLDFS 92
           KS+P +VI I+DSDDEP          S NI +ST F   KGKN   + +QNNEENLDF 
Sbjct: 27  KSSPVNVIVITDSDDEPA--------LSHNISLSTCFGEVKGKNLDNNHSQNNEENLDFG 78

Query: 93  EEPLFVANTKRKRTCNVVTSESESDDDNLPISQLKRTHIQKASADRVAMSEDSSLPAAIS 152
           E+ LF ANTKRKR  NVV SESES                    D      ++SL  A  
Sbjct: 79  EDILFSANTKRKRNSNVVMSESES------------------DHDDDDDDMNNSLTTANL 120

Query: 153 EDDKVTDNVKIRRRRLQPLRECLSKIHNDKMSSRRRHRAKHQQSVPANNDQSVEDLSDGE 212
           E DKV D  +  RRRLQ LR+  SK  ND++SS R H+ KH QS+P N+D  +E+ S   
Sbjct: 121 EVDKVVDTQR-PRRRLQTLRKLESKSQNDEISSGRHHKGKHLQSIPTNDDDELEEDSTYS 179

Query: 213 EESTGXXXXXXXXXXXXXCEVTCSKSSRDEFNSDVDSAS----SNLQDVSD 259
           EE                CE   S +S D  NSD +S +    SN QDVSD
Sbjct: 180 EEGNN-IDFIGDDFDASDCE-DMSNNSLDGSNSDAESNTSNKNSNFQDVSD 228


>Medtr1g028620.1 | hypothetical protein | HC | chr1:9709082-9705975
           | 20130731
          Length = 582

 Score =  223 bits (567), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 155/385 (40%), Positives = 214/385 (55%), Gaps = 49/385 (12%)

Query: 41  DISDSDDEPTQDPVPDRQASGNIFISTSFAAEKGKNSHGSCAQNNEENLDFSEEPLFVAN 100
           D+ D++ +       DRQ SGNI +ST   AE+G++S  + AQ +EEN D  E+      
Sbjct: 213 DLQDNNKDTYVQDASDRQGSGNISLSTCTVAERGEDSKSNYAQKSEENSDLGEDYSCTVV 272

Query: 101 TKRKRTCNVV--TSESESDDDNLPISQLKRTHIQKASADRVAMS-------------EDS 145
            KRK+  NVV   SE++ +DD+LPIS+L R H+++ S D +  +             +D 
Sbjct: 273 PKRKQARNVVLSESENDDEDDDLPISKLIRKHVEEVSVDDLVNAVDDAAADIDDDDDDDD 332

Query: 146 SLPAAISEDDKVTDNVKIRRRRLQPLRECLSKIHNDKMSSRRRHRAKHQQSVPANNDQSV 205
            +P +     +V    K  RRRL+ L +C+SK ++DK S             P NND   
Sbjct: 333 DMPIS-----QVIRKKKASRRRLKRLTKCVSKSNDDKTS----------LCFPTNNDAHD 377

Query: 206 EDLSDGEEE-----STGXXXXXXXXXXXXXCEVTCSKSSRDEFNSDVDSASSNL------ 254
           +D  D E E     S G              E+  +KS +DE N D DS  SN+      
Sbjct: 378 DDDDDEELEEDISNSEGENLSGFIVDDSDVSEINSNKS-QDECNGDADSDDSNISQDLPD 436

Query: 255 -------QDVSDGEMNFGKILSKIQRRKKNAMKWEYQADMLAEFGKDSELCMKAVCSLYK 307
                  QDVSDGE++  KILSKI+R K   +KWE + DML EFG D+ LCMKAVC LY+
Sbjct: 437 HSKDSDSQDVSDGEIDLVKILSKIKREKGQKIKWEDEHDMLKEFGNDAVLCMKAVCVLYR 496

Query: 308 QQTSEEQMSKESMCHNNRGFSKCDAPRGSDLGEYLTEGDPSGGLKKSVEELQEYDPEAVE 367
           Q+   +Q  +E+   + RGFS+ D  RG  LG +LT+  P  GLKK+VEEL+EY+PE V+
Sbjct: 497 QEVLGDQRYEETFGRDGRGFSRHDTARGCALGRFLTDDSPYDGLKKTVEELEEYNPEGVK 556

Query: 368 ECRTLATRYSKQLYEIYKNNEDPFF 392
            C TLA +YSKQ++EI+KN EDP F
Sbjct: 557 TCGTLAFKYSKQIFEIFKNKEDPNF 581



 Score =  145 bits (365), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/236 (44%), Positives = 140/236 (59%), Gaps = 27/236 (11%)

Query: 27  SLPINTKSTPGSVIDISDSDDEP--TQDPVPDRQASGNIFISTSFAAEKGKNSHGSCAQN 84
           + P   KS+  +VI I DSDDEP  + +   DRQ SG I ++T FA E+GKN   + AQN
Sbjct: 5   TTPTGAKSSSVNVIHIIDSDDEPDISHNISLDRQGSGKISLATCFAKEEGKNLDNNHAQN 64

Query: 85  NEENLDFSEEPLFVANTKRKRTCNVVTSESESDDDNLPISQLKRTHIQKASADRVAMSED 144
           N+E LDF E+ LF ANTKRKR CNVV SESESD D+  +S                    
Sbjct: 65  NKEKLDFGEDILFTANTKRKRPCNVVMSESESDQDDDGMS-------------------- 104

Query: 145 SSLPAAISEDDKVTDNVKIRRRRLQPLRECLSKIHNDKMSSRRRHRAKHQQSVPANNDQS 204
           +S+ +A  E DKVTD+ ++ RRRLQ LR+ +SK  ++KMSS R H+ K+QQS+P N+D  
Sbjct: 105 NSVTSANLEVDKVTDS-QMPRRRLQTLRKLVSKNRDNKMSSVRPHKVKYQQSIPKNDDDD 163

Query: 205 VE-DLSDGEEESTGXXXXXXXXXXXXXCEVTCSKSSRDEFNSDVDSASSNLQDVSD 259
           +  DLS  EE++               CE   S  S++E NSD+D+ SS+ QD+ D
Sbjct: 164 LGVDLSYSEEDNLS--DFIVDDVDASDCE-DISDKSQEESNSDLDANSSSSQDLQD 216


>Medtr1g028850.1 | hypothetical protein | LC | chr1:9814660-9812639
           | 20130731
          Length = 281

 Score =  123 bits (308), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 59/110 (53%), Positives = 79/110 (71%), Gaps = 6/110 (5%)

Query: 265 GKILSKIQR-RKKNAMKWEYQADMLAEFGKDSELCMKAVCSLYKQQTSEEQMSKESMCHN 323
           GK +SKI + +KK+ +KWE + +M A+FGKD  LCMKAVC L++ QTSEEQM+  ++   
Sbjct: 169 GKCVSKILKPQKKHKIKWESEVEMRADFGKDPVLCMKAVCVLFRHQTSEEQMNFVTLSPE 228

Query: 324 NRGFSKCDAPRGSDLGEYLTEGDPSGGLKKSVEELQEYDPEAVEECRTLA 373
            RG S CDA R      +L +G+P GGLKK+VEELQ++D + VE CRTLA
Sbjct: 229 GRGLSSCDASRN-----FLIDGNPYGGLKKTVEELQKFDSDGVETCRTLA 273



 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 39/201 (19%)

Query: 29  PINTKSTPGSVIDISDSDDEPTQDPVPDRQASGNIFISTSFAAEKGKNSHGSCAQNNEEN 88
           P++ K    +VIDI DSDDEP          S N+  ST+  + K  + +     ++++ 
Sbjct: 7   PVDEKYCFANVIDIIDSDDEPNN--------SQNVGASTTSVSAKSSSVNVIHIIDSDDE 58

Query: 89  LDFSEEPLF--VANTKRKRTCNVVTSESES--DDDN----LPISQLKRTHIQKASADRVA 140
            D S   L    ANTKRKRT NV+  ESES  DDDN    L  + L+   +         
Sbjct: 59  SDVSHNVLLDREANTKRKRTGNVIMIESESYHDDDNMRNSLTTATLEDDKVVDIPITNRC 118

Query: 141 MSEDSSLPA------------AISEDDKVTD-------NVKIRRRRLQPLRECLSKIHND 181
           MS +S   +            +  +DD++ D         K+ R RL+P  +C+SKI   
Sbjct: 119 MSNNSRDESSSDAESSSCSKDSYLQDDQINDEKSDFIRRKKVSRLRLKPQGKCVSKI--- 175

Query: 182 KMSSRRRHRAKHQQSVPANND 202
            +  +++H+ K +  V    D
Sbjct: 176 -LKPQKKHKIKWESEVEMRAD 195