Miyakogusa Predicted Gene

Lj1g3v0934400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0934400.1 Non Characterized Hit- tr|D3BJ45|D3BJ45_POLPA
Putative uncharacterized protein OS=Polysphondylium
pa,38.98,4e-17,Myosin_TH1,Myosin tail 2; seg,NULL,CUFF.26541.1
         (195 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g090670.1 | myosin heavy chain-like protein | HC | chr3:41...   265   2e-71
Medtr3g090670.2 | myosin heavy chain-like protein | HC | chr3:41...   248   3e-66

>Medtr3g090670.1 | myosin heavy chain-like protein | HC |
           chr3:41165675-41161055 | 20130731
          Length = 170

 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/169 (77%), Positives = 150/169 (88%), Gaps = 1/169 (0%)

Query: 28  SQPDDVQDK-LPCKGDHLNVPSHPYLTKILHKQGDQQVLFADKVLKFTGSGKMKTRILLI 86
           +  D + D+ +  K D++N+ SHP L KIL KQGDQ+VLFADKVLKFT SGKMK+RILLI
Sbjct: 2   AMKDQINDEPILSKRDYINIHSHPNLIKILRKQGDQEVLFADKVLKFTSSGKMKSRILLI 61

Query: 87  TDFAMYIVDPETDSLKRRIALAAVEKICLSKLSDNFLAVIIPTEYDLLIASARKSEIVAA 146
           TDFA+YIVDPE DSLKRRIALAAV+K+CLSKL+DNFLAVI+P+EYDLL+ASARK EIV A
Sbjct: 62  TDFAIYIVDPELDSLKRRIALAAVDKLCLSKLNDNFLAVIVPSEYDLLLASARKMEIVIA 121

Query: 147 FVEATRKASDYELEVVCSNRFEYNAASDLVKEIEFEEVEGGVKTRIIRQ 195
           F EAT K+SDYELEVV SNRFEYNAASDLVKEIEFEEVEGGVKTRI+R+
Sbjct: 122 FNEATMKSSDYELEVVSSNRFEYNAASDLVKEIEFEEVEGGVKTRILRK 170


>Medtr3g090670.2 | myosin heavy chain-like protein | HC |
           chr3:41165585-41160771 | 20130731
          Length = 209

 Score =  248 bits (632), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 124/160 (77%), Positives = 141/160 (88%), Gaps = 1/160 (0%)

Query: 28  SQPDDVQDK-LPCKGDHLNVPSHPYLTKILHKQGDQQVLFADKVLKFTGSGKMKTRILLI 86
           +  D + D+ +  K D++N+ SHP L KIL KQGDQ+VLFADKVLKFT SGKMK+RILLI
Sbjct: 2   AMKDQINDEPILSKRDYINIHSHPNLIKILRKQGDQEVLFADKVLKFTSSGKMKSRILLI 61

Query: 87  TDFAMYIVDPETDSLKRRIALAAVEKICLSKLSDNFLAVIIPTEYDLLIASARKSEIVAA 146
           TDFA+YIVDPE DSLKRRIALAAV+K+CLSKL+DNFLAVI+P+EYDLL+ASARK EIV A
Sbjct: 62  TDFAIYIVDPELDSLKRRIALAAVDKLCLSKLNDNFLAVIVPSEYDLLLASARKMEIVIA 121

Query: 147 FVEATRKASDYELEVVCSNRFEYNAASDLVKEIEFEEVEG 186
           F EAT K+SDYELEVV SNRFEYNAASDLVKEIEFEEVEG
Sbjct: 122 FNEATMKSSDYELEVVSSNRFEYNAASDLVKEIEFEEVEG 161