Miyakogusa Predicted Gene

Lj1g3v0913290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0913290.1 Non Characterized Hit- tr|B9SJJ2|B9SJJ2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,62.69,1e-17,PC-Esterase,PC-Esterase,
gene.Ljchr1_pseudomol_20120830.path1.gene2348.1
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g090120.1 | Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family...   120   3e-28
Medtr8g093530.1 | Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family...    72   1e-13
Medtr4g016940.1 | Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family...    50   7e-07

>Medtr3g090120.1 | Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family
           protein | HC | chr3:40954110-40951713 | 20130731
          Length = 466

 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 55/66 (83%), Positives = 61/66 (92%)

Query: 10  SALLTWASWVENTINTNRTRVFFRTFESSHWSGQNRHACKVARRPWKRTNGRDKSPISDM 69
           +ALLTWASWV+NT+NTNRTRVFFRTFESSHWSG N +ACKV +RPWKRT G+DKSPISDM
Sbjct: 339 TALLTWASWVDNTVNTNRTRVFFRTFESSHWSGHNHNACKVTKRPWKRTIGKDKSPISDM 398

Query: 70  INRVVK 75
           I RVVK
Sbjct: 399 IKRVVK 404


>Medtr8g093530.1 | Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family
           protein | HC | chr8:39082862-39086343 | 20130731
          Length = 434

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 41/65 (63%)

Query: 11  ALLTWASWVENTINTNRTRVFFRTFESSHWSGQNRHACKVARRPWKRTNGRDKSPISDMI 70
           AL TW SW+E  I+ NRTRVFFRTFE SHWS   R  C V + P   TN  +++  SD +
Sbjct: 297 ALKTWTSWIERKIDKNRTRVFFRTFEPSHWSDDTRRTCNVTQFPTFETNATEQNSFSDTV 356

Query: 71  NRVVK 75
             VVK
Sbjct: 357 LEVVK 361


>Medtr4g016940.1 | Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family
           protein | HC | chr4:5229832-5233267 | 20130731
          Length = 427

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 10/75 (13%)

Query: 11  ALLTWASWVENTINTNRTRVFFRTFESSH-----WSGQNRHACKVARRPWKRTN----GR 61
            L TWA+WV++TIN N+TRVFF T   +H     W  +N   C    RP K+ N    G 
Sbjct: 288 GLRTWANWVDSTINPNKTRVFFTTMSPAHTKSADWGNKNGTKCFNETRPVKKKNHWGSGS 347

Query: 62  DKSPISDMINRVVKK 76
           +K  +S ++ +V+KK
Sbjct: 348 NKGMMS-VVAKVIKK 361