Miyakogusa Predicted Gene
- Lj1g3v0913120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0913120.1 Non Characterized Hit- tr|A2ZR97|A2ZR97_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,68.25,6e-19,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.26520.1
(128 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g076070.1 | pathogenesis-like protein | HC | chr2:31855194... 118 1e-27
Medtr2g076010.1 | pathogenesis-like protein | HC | chr2:31817621... 112 7e-26
Medtr8g058350.1 | pathogenesis-like protein | HC | chr8:20093581... 108 2e-24
>Medtr2g076070.1 | pathogenesis-like protein | HC |
chr2:31855194-31858191 | 20130731
Length = 227
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Query: 6 VEKDKYRTYLHGDQEKNTKWRFGAPPNYEAVNKLFEEGRTKEWPPGSLEEQVQTLVKNWE 65
V KDKYR+ LH D+ +N +WR G PP Y VN+LFEEGRTKEWP GSLEE VQ +K+WE
Sbjct: 5 VAKDKYRSILH-DEAENIQWRHGGPPTYGLVNQLFEEGRTKEWPEGSLEETVQNAIKSWE 63
Query: 66 MEFFHKVDINDFRSIDPKKFTFSLNGRKPMSXXXXXXXXXXYIPMLQTFLPQ 117
ME HK+ + DF++I P+KF F +NGR+ ++ Y +L++ LP+
Sbjct: 64 MELTHKIRLQDFKTIVPEKFKFFVNGREGLT-AEETLSIGSYNALLKSSLPE 114
>Medtr2g076010.1 | pathogenesis-like protein | HC |
chr2:31817621-31815294 | 20130731
Length = 227
Score = 112 bits (281), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
Query: 3 SPSVEKDKYRTYLHGDQEKNTKWRFGAPPNYEAVNKLFEEGRTKEWPPGSLEEQVQTLVK 62
S V KDKYR+ LH D+ +N WR G PP Y VN+LFEEGRTK WP GSLEE VQ +K
Sbjct: 2 SNMVAKDKYRSILH-DEAENIHWRHGGPPTYGLVNQLFEEGRTKVWPEGSLEETVQNAIK 60
Query: 63 NWEMEFFHKVDINDFRSIDPKKFTFSLNGRKPMSXXXXXXXXXXYIPMLQTFLPQKL 119
+WEME HK+ + DF++I P+KF +NGR ++ Y +L++ LP+
Sbjct: 61 SWEMELSHKIRLQDFKTIVPEKFKLFVNGRDGLT-AEETLSLGSYNALLKSSLPENF 116
>Medtr8g058350.1 | pathogenesis-like protein | HC |
chr8:20093581-20097032 | 20130731
Length = 237
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 6 VEKDKYRTYLHGDQEKNTKWRFGAPPNYEAVNKLFEEGRTKEWPPGSLEEQVQTLVKNWE 65
VE DKYR++L D+ T+WR G PP Y+ VNKLFE+GRTK WP GSLEE VQ +K+WE
Sbjct: 10 VEGDKYRSFLD-DEAHTTQWRHGGPPIYDVVNKLFEQGRTKVWPEGSLEETVQNAIKSWE 68
Query: 66 MEFFHKVDINDFRSIDPKKFTFSLNGRKPMS 96
ME HK + DF++I+P+KF +NG + ++
Sbjct: 69 MELSHKTRVQDFKTINPEKFKLFVNGTEGLT 99