Miyakogusa Predicted Gene

Lj1g3v0913110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0913110.1 tr|Q4A185|Q4A185_MEDTR Beclin 1 protein
OS=Medicago truncatula GN=atg6 PE=2 SV=1,81.63,9e-19,
,gene.Ljchr1_pseudomol_20120830.path1.gene2331.1
         (134 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g018770.1 | autophagy protein beclin 1 | HC | chr3:5165817...    97   5e-21

>Medtr3g018770.1 | autophagy protein beclin 1 | HC |
           chr3:5165817-5174556 | 20130731
          Length = 509

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/49 (81%), Positives = 44/49 (89%)

Query: 63  KKGRSRTLPVDLNMPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSTSSG 111
           KKGR+R+LPVD N+PRWVCQNCRN LCIVGVDSYADK+FNDPSRS   G
Sbjct: 6   KKGRNRSLPVDPNVPRWVCQNCRNPLCIVGVDSYADKYFNDPSRSGMQG 54