Miyakogusa Predicted Gene

Lj1g3v0901970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0901970.1 Non Characterized Hit- tr|B9S2P7|B9S2P7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,45.32,8e-18,seg,NULL,CUFF.26531.1
         (257 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088815.1 | hypothetical protein | HC | chr3:40636926-4063...   112   5e-25
Medtr1g029550.1 | hypothetical protein | HC | chr1:10168072-1017...    80   2e-15
Medtr3g096450.1 | hypothetical protein | HC | chr3:44088490-4408...    53   4e-07

>Medtr3g088815.1 | hypothetical protein | HC |
           chr3:40636926-40636040 | 20130731
          Length = 250

 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/147 (50%), Positives = 84/147 (57%), Gaps = 14/147 (9%)

Query: 2   NSFQLYDETRHRTQNKWDAIATNSILWPSKPAQFVRDPL---DMDVNEYGRALSPSSRTE 58
           NSF LYDETRH T   W+A  +N+ LWPS     + D      M+   Y R+LSP SRTE
Sbjct: 13  NSFDLYDETRHET---WEATNSNN-LWPSTQQPQLDDEQPRWSMNSPHY-RSLSPVSRTE 67

Query: 59  AIVRGQRELMEMVRNMPESNYELSLKDLVEHQHWHDAPQENSXXXXXXXXXXXXXXQGSA 118
           AIVRGQ+ELMEMVRNMPE NYELSLKDLVEH H     +                     
Sbjct: 68  AIVRGQKELMEMVRNMPEYNYELSLKDLVEHHH-----RTREENTEEEEEDKVKKNSSVK 122

Query: 119 RKVDKMAHVKRTGSNIDRG-GFYLKVG 144
           +  DK  HVK+    IDR  GFYLKVG
Sbjct: 123 KIDDKKVHVKKNDGKIDRDRGFYLKVG 149


>Medtr1g029550.1 | hypothetical protein | HC |
           chr1:10168072-10171905 | 20130731
          Length = 263

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 60/101 (59%), Gaps = 14/101 (13%)

Query: 45  NEYGRALSPSSRTEAIVRGQRELMEMVRNMPESNYELSLKDLVEHQHWHDAPQENSXXXX 104
           N Y R+LSP S+T+AI RGQRELMEMV+NMPES+YEL+LKDLVE  H     + N     
Sbjct: 62  NNY-RSLSPESKTQAIERGQRELMEMVKNMPESSYELTLKDLVEEHH---VEENNKVKER 117

Query: 105 XXXXXXXXXXQG--SARKVDKMAHVKRTGSNIDRGGFYLKV 143
                     +G  ++R +DK         NID GG YLK+
Sbjct: 118 NLSNKNTRKREGIRASRNMDK--------KNIDSGGLYLKM 150


>Medtr3g096450.1 | hypothetical protein | HC |
           chr3:44088490-44089646 | 20130731
          Length = 245

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 34/41 (82%)

Query: 51  LSPSSRTEAIVRGQRELMEMVRNMPESNYELSLKDLVEHQH 91
           +S  SR++ I+ G++ELMEM+++MPES+YELS +D+V  QH
Sbjct: 61  VSEPSRSKDILEGKKELMEMIQDMPESSYELSFQDMVVEQH 101