Miyakogusa Predicted Gene

Lj1g3v0898880.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0898880.2 Non Characterized Hit- tr|I1LKM2|I1LKM2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45889 PE,41.67,0.000001,
,CUFF.26500.2
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g051565.1 | bHLH transcription factor-like protein | HC | ...    61   3e-10
Medtr4g051565.2 | bHLH transcription factor-like protein | HC | ...    61   3e-10

>Medtr4g051565.1 | bHLH transcription factor-like protein | HC |
           chr4:18510285-18517807 | 20130731
          Length = 921

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 35/90 (38%)

Query: 4   DASFRNQEEDRVCSLINKTVENNSVNITGEGLVLSFLLFFLIHQVLISSAFFVILISLSY 63
           D+  R QE+DRVCSLINK + NNSVN+ G+G+                            
Sbjct: 71  DSQLRIQEDDRVCSLINKMMVNNSVNVAGQGI---------------------------- 102

Query: 64  VIQETWTVGRAAFLGNHQWILFNKSTRCMY 93
                  +GRAAF GNHQWIL N   + +Y
Sbjct: 103 -------LGRAAFTGNHQWILLNNFIKDVY 125


>Medtr4g051565.2 | bHLH transcription factor-like protein | HC |
           chr4:18510285-18518000 | 20130731
          Length = 921

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 35/90 (38%)

Query: 4   DASFRNQEEDRVCSLINKTVENNSVNITGEGLVLSFLLFFLIHQVLISSAFFVILISLSY 63
           D+  R QE+DRVCSLINK + NNSVN+ G+G+                            
Sbjct: 71  DSQLRIQEDDRVCSLINKMMVNNSVNVAGQGI---------------------------- 102

Query: 64  VIQETWTVGRAAFLGNHQWILFNKSTRCMY 93
                  +GRAAF GNHQWIL N   + +Y
Sbjct: 103 -------LGRAAFTGNHQWILLNNFIKDVY 125