Miyakogusa Predicted Gene

Lj1g3v0886550.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0886550.1 Non Characterized Hit- tr|I1M384|I1M384_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26314 PE,81.25,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
Thymidylate_kin,NULL; no description,NULL,CUFF.26587.1
         (259 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0274s0020.1 | P-loop nucleoside triphosphate hydrolase supe...   258   4e-69
Medtr1g092440.1 | P-loop nucleoside triphosphate hydrolase super...   257   8e-69
Medtr0271s0010.1 | P-loop nucleoside triphosphate hydrolase supe...   190   1e-48
Medtr0271s0030.1 | thymidylate kinase | HC | scaffold0271:7578-6...    72   4e-13

>Medtr0274s0020.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | scaffold0274:8441-12377 |
           20130731
          Length = 263

 Score =  258 bits (659), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 127/161 (78%), Positives = 139/161 (86%), Gaps = 14/161 (8%)

Query: 113 TLSFRALVLQNSLNSRVKFSSKCI--------------MEGNRKESRGALVVLEGLDRSG 158
           +LSFRALVL NSLN +VK SSKC               +EGN+KESRGAL+VLEGLDRSG
Sbjct: 12  SLSFRALVLPNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGALIVLEGLDRSG 71

Query: 159 KSSQCSRLVSYLEGQGINAELWRFPDRTTSVGQMISAYLTNTSQLDDHTIHLLFSANRWE 218
           KSSQCSRLVSYLEG+G++AELWRFPDRTT+VGQMISAYLTN SQLDDHTIHLLFSANRWE
Sbjct: 72  KSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHTIHLLFSANRWE 131

Query: 219 KRLLMETKLKTGTTLIVDRYSYSGVAFSSAKGLHFEWCKAP 259
           KR LMETKLK+GTTLIVDRYSYSGVAFSSAKGL  +WCK+P
Sbjct: 132 KRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKSP 172


>Medtr1g092440.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | LC | chr1:41419966-41427313 |
           20130731
          Length = 626

 Score =  257 bits (656), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 127/161 (78%), Positives = 138/161 (85%), Gaps = 14/161 (8%)

Query: 113 TLSFRALVLQNSLNSRVKFSSKCI--------------MEGNRKESRGALVVLEGLDRSG 158
           +LSFRALV  NSLN +VK SSKC               +EGN+KESRGAL+VLEGLDRSG
Sbjct: 12  SLSFRALVFPNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGALIVLEGLDRSG 71

Query: 159 KSSQCSRLVSYLEGQGINAELWRFPDRTTSVGQMISAYLTNTSQLDDHTIHLLFSANRWE 218
           KSSQCSRLVSYLEG+G++AELWRFPDRTT+VGQMISAYLTN SQLDDHTIHLLFSANRWE
Sbjct: 72  KSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHTIHLLFSANRWE 131

Query: 219 KRLLMETKLKTGTTLIVDRYSYSGVAFSSAKGLHFEWCKAP 259
           KR LMETKLK+GTTLIVDRYSYSGVAFSSAKGL  +WCKAP
Sbjct: 132 KRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKAP 172


>Medtr0271s0010.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | scaffold0271:1879-482 |
           20130731
          Length = 141

 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 94/125 (75%), Positives = 105/125 (84%), Gaps = 14/125 (11%)

Query: 113 TLSFRALVLQNSLNSRVKFSSKCI--------------MEGNRKESRGALVVLEGLDRSG 158
           +LSFRALVL NSLN +VK SSKC               +EGN+KESRGAL+VLEGLDRSG
Sbjct: 12  SLSFRALVLPNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGALIVLEGLDRSG 71

Query: 159 KSSQCSRLVSYLEGQGINAELWRFPDRTTSVGQMISAYLTNTSQLDDHTIHLLFSANRWE 218
           KSSQCSRLVSYLEG+G++AELWRFPDRTT+VGQMISAYLTN SQLDDHTIHLLFSANRWE
Sbjct: 72  KSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHTIHLLFSANRWE 131

Query: 219 KRLLM 223
           KR ++
Sbjct: 132 KRFVL 136


>Medtr0271s0030.1 | thymidylate kinase | HC | scaffold0271:7578-6383
           | 20130731
          Length = 150

 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/37 (86%), Positives = 35/37 (94%)

Query: 223 METKLKTGTTLIVDRYSYSGVAFSSAKGLHFEWCKAP 259
           METKLK+GTTLIVDRYSYSGVAFSSAKGL  +WCK+P
Sbjct: 1   METKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKSP 37