Miyakogusa Predicted Gene

Lj1g3v0874370.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0874370.1 CUFF.26458.1
         (125 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088525.1 | keratinocytes-associated protein | HC | chr3:4...   154   2e-38

>Medtr3g088525.1 | keratinocytes-associated protein | HC |
           chr3:40241418-40237608 | 20130731
          Length = 125

 Score =  154 bits (389), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 85/125 (68%)

Query: 1   MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELYTXXXXXXXXXXXXXXXXXXXNFQET 60
           MAGSGSSM+YSFLLF VILSLQEMYRGKLASSEL+T                   NFQET
Sbjct: 1   MAGSGSSMMYSFLLFIVILSLQEMYRGKLASSELFTILGGFTSSLLFLVLLTFIGNFQET 60

Query: 61  TGTRTGWGXXXXXXXXXXXXXGTVHRVCITTCFLFSAVLLYEVNKLSSSALTPIDSRTKK 120
            G ++GWG              TVHRVCITTCFLFSAVLLYEVNKLS SA++  DSRTKK
Sbjct: 61  AGAKSGWGAVIIAEVVALIAASTVHRVCITTCFLFSAVLLYEVNKLSGSAVSTSDSRTKK 120

Query: 121 QGGRA 125
           Q GRA
Sbjct: 121 QSGRA 125