Miyakogusa Predicted Gene
- Lj1g3v0874150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0874150.1 tr|G7LH81|G7LH81_MEDTR Cyclin A OS=Medicago
truncatula GN=MTR_8g095860 PE=3 SV=1,78.4,0,Cyclin_N,Cyclin,
N-terminal; Cyclin_C,Cyclin, C-terminal; CYCLIN-A,NULL; CYCLINE,NULL;
CYCLINS,Cycli,CUFF.26440.1
(340 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g088405.1 | carboxy-terminal domain cyclin | HC | chr3:401... 571 e-163
Medtr3g088415.1 | carboxy-terminal domain cyclin | HC | chr3:401... 436 e-122
Medtr3g088415.2 | carboxy-terminal domain cyclin | HC | chr3:401... 354 6e-98
Medtr3g107970.1 | carboxy-terminal domain cyclin | HC | chr3:498... 305 4e-83
Medtr3g088415.3 | carboxy-terminal domain cyclin | HC | chr3:401... 291 6e-79
Medtr1g011470.1 | carboxy-terminal domain cyclin | HC | chr1:203... 289 2e-78
Medtr2g102520.1 | carboxy-terminal domain cyclin | HC | chr2:441... 285 3e-77
Medtr2g102550.1 | carboxy-terminal domain cyclin | HC | chr2:441... 285 6e-77
Medtr1g018680.1 | carboxy-terminal domain cyclin | HC | chr1:543... 278 7e-75
Medtr3g102510.1 | carboxy-terminal domain cyclin | HC | chr3:472... 254 8e-68
Medtr3g102530.1 | carboxy-terminal domain cyclin | HC | chr3:472... 247 9e-66
Medtr3g102520.1 | carboxy-terminal domain cyclin | HC | chr3:472... 239 4e-63
Medtr3g102560.1 | carboxy-terminal domain cyclin | HC | chr3:472... 222 4e-58
Medtr3g102540.1 | carboxy-terminal domain cyclin | LC | chr3:472... 216 3e-56
Medtr5g023790.1 | carboxy-terminal domain cyclin | HC | chr5:947... 189 4e-48
Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731 185 7e-47
Medtr5g088980.1 | carboxy-terminal domain cyclin | HC | chr5:386... 183 2e-46
Medtr8g074000.1 | carboxy-terminal domain cyclin | HC | chr8:312... 182 3e-46
Medtr5g023790.3 | carboxy-terminal domain cyclin | HC | chr5:947... 175 6e-44
Medtr5g023790.2 | carboxy-terminal domain cyclin | HC | chr5:947... 140 1e-33
Medtr3g060410.1 | carboxy-terminal domain cyclin | LC | chr3:236... 113 3e-25
Medtr3g060770.1 | carboxy-terminal domain cyclin | LC | chr3:241... 106 3e-23
Medtr3g060820.1 | carboxy-terminal domain cyclin | LC | chr3:241... 105 7e-23
Medtr3g061680.1 | carboxy-terminal domain cyclin | LC | chr3:246... 104 1e-22
Medtr3g460990.1 | carboxy-terminal domain cyclin | LC | chr3:240... 102 4e-22
Medtr3g060400.1 | carboxy-terminal domain cyclin | LC | chr3:236... 102 4e-22
Medtr6g045270.1 | carboxy-terminal domain cyclin | LC | chr6:113... 84 3e-16
Medtr1g032850.1 | carboxy-terminal domain cyclin | HC | chr1:117... 76 4e-14
Medtr5g011900.1 | amine-terminal domain cyclin | LC | chr5:35020... 74 2e-13
Medtr8g063120.2 | carboxy-terminal domain cyclin | HC | chr8:264... 70 4e-12
Medtr8g063120.1 | carboxy-terminal domain cyclin | HC | chr8:264... 70 4e-12
Medtr5g044040.1 | amine-terminal domain cyclin | LC | chr5:19364... 69 5e-12
Medtr3g100710.1 | carboxy-terminal domain cyclin | HC | chr3:463... 69 5e-12
Medtr5g015670.1 | carboxy-terminal domain cyclin | HC | chr5:546... 64 2e-10
Medtr5g032550.1 | carboxy-terminal domain cyclin | HC | chr5:139... 63 5e-10
Medtr5g032550.2 | carboxy-terminal domain cyclin | HC | chr5:139... 62 7e-10
Medtr4g080990.1 | carboxy-terminal domain cyclin | HC | chr4:312... 60 2e-09
Medtr3g103080.1 | carboxy-terminal domain cyclin | HC | chr3:474... 60 3e-09
Medtr2g089490.2 | carboxy-terminal domain cyclin | HC | chr2:378... 60 4e-09
Medtr2g089490.1 | carboxy-terminal domain cyclin | HC | chr2:378... 59 5e-09
Medtr2g011500.1 | carboxy-terminal domain cyclin | HC | chr2:280... 59 5e-09
Medtr5g035360.1 | carboxy-terminal domain cyclin | HC | chr5:153... 59 7e-09
Medtr1g107535.1 | carboxy-terminal domain cyclin | HC | chr1:488... 56 4e-08
Medtr5g065830.1 | carboxy-terminal domain cyclin | LC | chr5:277... 55 8e-08
Medtr4g094942.1 | carboxy-terminal domain cyclin | HC | chr4:393... 51 2e-06
Medtr2g005960.1 | amine-terminal domain cyclin | LC | chr2:40294... 51 2e-06
Medtr8g068950.1 | carboxy-terminal domain cyclin | LC | chr8:288... 51 2e-06
Medtr3g102310.1 | carboxy-terminal domain cyclin | HC | chr3:471... 50 4e-06
>Medtr3g088405.1 | carboxy-terminal domain cyclin | HC |
chr3:40170176-40175369 | 20130731
Length = 510
Score = 571 bits (1471), Expect = e-163, Method: Compositional matrix adjust.
Identities = 272/343 (79%), Positives = 301/343 (87%), Gaps = 3/343 (0%)
Query: 1 MSTSDSLMSLEFEYADNGDVVSTKSIENRACGILSISDSSKIAGRIHGSDAIMKREANEV 60
MSTSDSLM+ EFEY N DVVS KSIEN+ C IL+ISDSSK+ GRIH D I+K ANE
Sbjct: 168 MSTSDSLMTPEFEYIRNDDVVSIKSIENKTCNILNISDSSKMGGRIHDIDTILKSRANEF 227
Query: 61 VDIDYNINDPQFCASFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILIDWLVEV 120
VDID N DPQFCASFAHEIYENLRV+E+ +RPSMD+MEKIQK++NA+MRA+LIDWLVEV
Sbjct: 228 VDIDRNTKDPQFCASFAHEIYENLRVSEKFKRPSMDYMEKIQKKINASMRAMLIDWLVEV 287
Query: 121 TEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCYV 180
+EYRLLPDTLFLAVNY+DRYLSGKA+ Q+LQLLGV CMMIAAKYEEICAPK E+FCYV
Sbjct: 288 ADEYRLLPDTLFLAVNYLDRYLSGKAMNTQQLQLLGVTCMMIAAKYEEICAPKVEEFCYV 347
Query: 181 TDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYLA 240
TDNTYSKEQ+LEMESSVL FLKFEMTAPT RCFLRRFI VAQQTCE+PLM+LEYLADY+A
Sbjct: 348 TDNTYSKEQVLEMESSVLNFLKFEMTAPTIRCFLRRFITVAQQTCEIPLMQLEYLADYVA 407
Query: 241 ELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELRECVKQLHW 300
+LSLLEY MLKY PS+IAASATFLAKYILL K PWNSMLRHYTGYQASELRECV+ LH
Sbjct: 408 DLSLLEYDMLKYTPSLIAASATFLAKYILLSTKNPWNSMLRHYTGYQASELRECVEGLHL 467
Query: 301 LFCNG---CLNLTAIRTKYSQHKFKFVAKKYCPPSIPVEIFHN 340
L+ NG ++TAIR KYSQHKFKF AKK CPPSIPVE+FHN
Sbjct: 468 LYRNGYHSSPSITAIREKYSQHKFKFAAKKCCPPSIPVEVFHN 510
>Medtr3g088415.1 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182656 | 20130731
Length = 505
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/342 (61%), Positives = 263/342 (76%), Gaps = 2/342 (0%)
Query: 1 MSTSDSLMSLEFEYADNGDVVSTKSIENRACGILSISDSSKIAGRIHGSDAIMKREANE- 59
MS+ DS S + EY DN DV + SIE + L+ISDS+ +G I D +++ E E
Sbjct: 164 MSSCDSFKSPDIEYVDNSDVPAVDSIERKTFCSLNISDSNYPSGNICSRDILVELEKGEK 223
Query: 60 VVDIDYNINDPQFCASFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILIDWLVE 119
+V+ID + DPQ CA+FA +IY++LR +E +RPS DFMEKIQK++N +MRAILIDWLVE
Sbjct: 224 IVNIDNDYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVE 283
Query: 120 VTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCY 179
V EEYRL+PDTL+L VNYIDRYLSG + +Q+LQLLGVA MMIA+KYEEICAP+ E+FCY
Sbjct: 284 VAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCY 343
Query: 180 VTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYL 239
+TDNTY K+++L+MES+VL FLKFEMTAPT +CFLRRF+R AQ EVP ++LE L +++
Sbjct: 344 ITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNFI 403
Query: 240 AELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELRECVKQLH 299
AELSLLEY ML Y PS+IAAS+ FLAKY+L P KPWN L+HYT YQ S+L CVK LH
Sbjct: 404 AELSLLEYSMLCYAPSLIAASSIFLAKYMLFPAMKPWNPTLQHYTQYQPSDLCACVKDLH 463
Query: 300 WLFCNGC-LNLTAIRTKYSQHKFKFVAKKYCPPSIPVEIFHN 340
L CN NL AI+ KY+QHK+K+VA KYCPPSIP E F N
Sbjct: 464 RLCCNSPNSNLPAIKEKYNQHKYKYVANKYCPPSIPQEFFQN 505
>Medtr3g088415.2 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182268 | 20130731
Length = 443
Score = 354 bits (909), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 171/277 (61%), Positives = 217/277 (78%), Gaps = 1/277 (0%)
Query: 1 MSTSDSLMSLEFEYADNGDVVSTKSIENRACGILSISDSSKIAGRIHGSDAIMKREANE- 59
MS+ DS S + EY DN DV + SIE + L+ISDS+ +G I D +++ E E
Sbjct: 164 MSSCDSFKSPDIEYVDNSDVPAVDSIERKTFCSLNISDSNYPSGNICSRDILVELEKGEK 223
Query: 60 VVDIDYNINDPQFCASFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILIDWLVE 119
+V+ID + DPQ CA+FA +IY++LR +E +RPS DFMEKIQK++N +MRAILIDWLVE
Sbjct: 224 IVNIDNDYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVE 283
Query: 120 VTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCY 179
V EEYRL+PDTL+L VNYIDRYLSG + +Q+LQLLGVA MMIA+KYEEICAP+ E+FCY
Sbjct: 284 VAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCY 343
Query: 180 VTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYL 239
+TDNTY K+++L+MES+VL FLKFEMTAPT +CFLRRF+R AQ EVP ++LE L +++
Sbjct: 344 ITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNFI 403
Query: 240 AELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKPW 276
AELSLLEY ML Y PS+IAAS+ FLAKY+L P KPW
Sbjct: 404 AELSLLEYSMLCYAPSLIAASSIFLAKYMLFPAMKPW 440
>Medtr3g107970.1 | carboxy-terminal domain cyclin | HC |
chr3:49887211-49892757 | 20130731
Length = 478
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/291 (50%), Positives = 208/291 (71%), Gaps = 9/291 (3%)
Query: 38 DSSKIAGRIHGSDAIMKREANEVVDIDYNINDPQFCASFAHEIYENLRVTEETRRPSMDF 97
D + I +I SD + VDID + D Q +++A +IY +RV+E +RPS ++
Sbjct: 181 DINMICEKIGASDCLT------FVDIDKKLMDSQIWSAYAPDIYTKVRVSELEKRPSTNY 234
Query: 98 MEKIQKELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGV 157
MEK+Q++++ +MR ILIDWLVEV+EEY+L+PDTL+L VN IDR+LS I + RLQLLGV
Sbjct: 235 MEKLQQDISPSMRGILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSTSLIQKHRLQLLGV 294
Query: 158 ACMMIAAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRF 217
CM IA+KYEE+CAP+ E+FC++TDNTY+KE++++ME VL L+F+++ PT + F+RRF
Sbjct: 295 TCMFIASKYEEMCAPRVEEFCFITDNTYTKEEVVKMEKEVLNLLRFQLSVPTTKTFIRRF 354
Query: 218 IRVAQQTCEVPLMRLEYLADYLAELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKPWN 277
I+ AQ + +VPL LE+LA+YLAEL+L+EY L++ PS +AASA FLA++ L + PW
Sbjct: 355 IQAAQSSYKVPLAELEFLANYLAELTLVEYSFLQFLPSRVAASAVFLARWTLNHSEHPWT 414
Query: 278 SMLRHYTGYQASELRECVKQLHWLFCN--GCLNLTAIRTKYSQHKFKFVAK 326
+ L H+T Y+ASEL+ V L L N GC +L AIR KY KF VAK
Sbjct: 415 TTLEHFTNYKASELKPVVLALEDLQLNTKGC-SLHAIREKYKHEKFNGVAK 464
>Medtr3g088415.3 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40181795 | 20130731
Length = 397
Score = 291 bits (745), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 178/228 (78%), Gaps = 1/228 (0%)
Query: 1 MSTSDSLMSLEFEYADNGDVVSTKSIENRACGILSISDSSKIAGRIHGSDAIMKREANE- 59
MS+ DS S + EY DN DV + SIE + L+ISDS+ +G I D +++ E E
Sbjct: 164 MSSCDSFKSPDIEYVDNSDVPAVDSIERKTFCSLNISDSNYPSGNICSRDILVELEKGEK 223
Query: 60 VVDIDYNINDPQFCASFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILIDWLVE 119
+V+ID + DPQ CA+FA +IY++LR +E +RPS DFMEKIQK++N +MRAILIDWLVE
Sbjct: 224 IVNIDNDYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVE 283
Query: 120 VTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCY 179
V EEYRL+PDTL+L VNYIDRYLSG + +Q+LQLLGVA MMIA+KYEEICAP+ E+FCY
Sbjct: 284 VAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCY 343
Query: 180 VTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEV 227
+TDNTY K+++L+MES+VL FLKFEMTAPT +CFLRRF+R AQ EV
Sbjct: 344 ITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEV 391
>Medtr1g011470.1 | carboxy-terminal domain cyclin | HC |
chr1:2038488-2033308 | 20130731
Length = 422
Score = 289 bits (740), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/274 (50%), Positives = 191/274 (69%), Gaps = 3/274 (1%)
Query: 60 VVDIDYNINDPQFCASFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILIDWLVE 119
+VDID + D S+A +IY N+ V E RRP ++ME +Q+++ MR IL+DWLVE
Sbjct: 145 IVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVE 204
Query: 120 VTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCY 179
V +E++L+PDTL+LAVN IDR+LS + I ++RLQLLG+ CM+I++KYEEICAP EDFC
Sbjct: 205 VADEFKLVPDTLYLAVNLIDRFLSQRLITKRRLQLLGITCMLISSKYEEICAPGVEDFCV 264
Query: 180 VTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYL 239
+TDNTYS++++L+ME VL L F++ PT + FLRRFI+VAQ + +V LE+LA+YL
Sbjct: 265 ITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYL 324
Query: 240 AELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELRECVKQLH 299
AEL+L+EY L+++PS IAAS+ LA++ L + PWN L HYT Y+ASEL+ V +L
Sbjct: 325 AELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLELI 384
Query: 300 WLFCNG--CLNLTAIRTKYSQHKFKFVAKKYCPP 331
L N C L A+R KY KF VA P
Sbjct: 385 DLQLNTKRC-RLNAVREKYQHQKFNSVANLSPKP 417
>Medtr2g102520.1 | carboxy-terminal domain cyclin | HC |
chr2:44171841-44168809 | 20130731
Length = 479
Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/297 (48%), Positives = 201/297 (67%), Gaps = 3/297 (1%)
Query: 37 SDSSKIAGRIHGSDAIMKREANEVVDIDYNINDPQFCASFAHEIYENLRVTEETRRPSMD 96
S S K A + + S+ + + +V DID + DPQ C+ +A +IY++LRV E +RRP +
Sbjct: 176 SSSQKKAKKGNISELLDVSKHPDVADIDADFEDPQLCSHYAADIYDHLRVAELSRRPYPN 235
Query: 97 FMEKIQKELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLG 156
FME +Q+++ +MRAIL+DWLVEV+E Y+L +TL+L V ID +LS I ++RLQLLG
Sbjct: 236 FMETVQQDITPSMRAILVDWLVEVSEGYKLQANTLYLTVYLIDWFLSKNCIERERLQLLG 295
Query: 157 VACMMIAAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRR 216
+ CM+IA+KYEE+ AP+ EDFC++TDNTY+KE+++++ES VL +++ APT + FLRR
Sbjct: 296 ITCMLIASKYEEVNAPRIEDFCFITDNTYTKEEVVKLESLVLKSSSYQLFAPTTKTFLRR 355
Query: 217 FIRVAQQTCEVPLMRLEYLADYLAELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKPW 276
F+R AQ + + P + LEYLA+YLAEL+L+ YG L + PS+IAASA FLA++ L PW
Sbjct: 356 FLRAAQASYKRPSIELEYLANYLAELTLMNYGFLNFLPSMIAASAVFLARWTLDQSSHPW 415
Query: 277 NSMLRHYTGYQASELRECVKQLHWLFCNG---CLNLTAIRTKYSQHKFKFVAKKYCP 330
N L HY Y+AS+L+ V L L N C AIR KY Q K VA P
Sbjct: 416 NPTLEHYASYKASDLKATVLALQDLQLNSNDDCPLPAAIRKKYIQDKLNCVATLSSP 472
>Medtr2g102550.1 | carboxy-terminal domain cyclin | HC |
chr2:44178430-44174949 | 20130731
Length = 429
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 220/343 (64%), Gaps = 7/343 (2%)
Query: 1 MSTSDSLMSLEFEYADNGDVVSTKSIENRACGILS---ISDSSKIAGRIHGSDAIMKREA 57
++ S + S+ FE +++ ++ E A ++S + + A + S + +
Sbjct: 89 LNVSTEVPSVSFEDNAPSNLIGGQTSEPSAQPLISQAKAASQTDAAKKDSDSKLLNAPKD 148
Query: 58 NEVVDIDYNINDPQFCASFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILIDWL 117
++ +ID +I DPQ C+ +A +IY+NLRV E +RRP +FME +Q+++ MRAILIDWL
Sbjct: 149 PDIPNIDADIEDPQLCSFYAADIYDNLRVAELSRRPHPNFMETVQRDITPGMRAILIDWL 208
Query: 118 VEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDF 177
VEV+E++ L +TL+L V ID +LS +I +RLQLLG+ CM+IA+KYEEI A EDF
Sbjct: 209 VEVSEQFNLQANTLYLTVYLIDWFLSKNSIEIKRLQLLGITCMLIASKYEEINANHIEDF 268
Query: 178 CYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLAD 237
C +TDNTY++E++L ME VL ++++APT + FLRRF+R AQ + + P + LEYLA+
Sbjct: 269 CVMTDNTYTREEVLNMEIQVLKSSAYQLSAPTTKHFLRRFLRAAQASYQRPSVELEYLAN 328
Query: 238 YLAELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELRECVKQ 297
YLAEL+L+ YG L + PS+IAASA FLA++ L + PWN L HY Y+AS+L+ V
Sbjct: 329 YLAELTLMNYGFLNFFPSMIAASAVFLARWTLDQSRHPWNPTLEHYASYKASDLKATVLA 388
Query: 298 LHWLFCNG--CLNLTAIRTKYSQHKFKFVAKKYCPPSIPVEIF 338
L L N C AIRTKY Q KF VA P++P +F
Sbjct: 389 LQNLQLNSDDC-PYPAIRTKYRQSKFHGVA-VLSSPTLPETMF 429
>Medtr1g018680.1 | carboxy-terminal domain cyclin | HC |
chr1:5434143-5436837 | 20130731
Length = 363
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 131/274 (47%), Positives = 192/274 (70%), Gaps = 3/274 (1%)
Query: 69 DPQFCASFAHEIYENLRVTE--ETRRPSMDFMEKIQKELNATMRAILIDWLVEVTEEYRL 126
DPQ C ++ +IY+ LR E ++RP D+++K+Q+++NA+MR +L+DWLVEV EEY+L
Sbjct: 84 DPQLCETYVSDIYDYLRNMEVDSSKRPLCDYIQKVQRDVNASMRGVLVDWLVEVAEEYKL 143
Query: 127 LPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCYVTDNTYS 186
+ DTL+ +V+YIDR+LS + +Q+LQLLGVA M++A+KYEEI P+ EDFCY+TDNTYS
Sbjct: 144 VSDTLYFSVSYIDRFLSLNDLTRQKLQLLGVASMLVASKYEEIKPPEVEDFCYITDNTYS 203
Query: 187 KEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYLAELSLLE 246
KE++L ME+ +L LKFE+ PT + FLR + + ++ E+L YLAELSLL+
Sbjct: 204 KEEVLTMEADILKSLKFELGGPTIKTFLRHVCFIDYVSLYASELQFEFLCSYLAELSLLD 263
Query: 247 YGMLKYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELRECVKQLHWLFCN-G 305
Y +K+ PS++AAS FLA+++L P+ PWNS + +T Y+ ++L+ECV +H L+
Sbjct: 264 YNCVKFLPSMVAASVVFLARFMLSPKTHPWNSAIYEFTRYKPADLKECVLNIHDLYLGRK 323
Query: 306 CLNLTAIRTKYSQHKFKFVAKKYCPPSIPVEIFH 339
+L A+R KY QHKFK VA PP I + F
Sbjct: 324 GGSLQAVRDKYKQHKFKCVATTPSPPEISLSFFE 357
>Medtr3g102510.1 | carboxy-terminal domain cyclin | HC |
chr3:47243553-47241418 | 20130731
Length = 340
Score = 254 bits (649), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 123/273 (45%), Positives = 183/273 (67%), Gaps = 6/273 (2%)
Query: 63 IDYNINDPQFCASFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILIDWLVEVTE 122
++ N++ P + +I++ L+ E+ RRP +ME +Q+ + + MR L+DWLVEV +
Sbjct: 66 LNSNLDKP-----YVSDIFDYLQTMEKKRRPMFGYMENVQRGITSNMRGTLVDWLVEVAD 120
Query: 123 EYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCYVTD 182
EY LLP+TL L+V+YIDR+LS + II+ +LQLLGV+ M+IA+KYEEI PKA DFC +TD
Sbjct: 121 EYTLLPETLHLSVSYIDRFLSNQPIIRSKLQLLGVSSMLIASKYEEITPPKAIDFCQITD 180
Query: 183 NTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYLAEL 242
NTY +++L+ME+ +L L FEM P FL+ F+ +A + + ++ EYL +YLA++
Sbjct: 181 NTYDLDEVLKMEADILKTLNFEMGNPNVITFLKSFVGIASENQKTSNLQFEYLCNYLADI 240
Query: 243 SLLEYGMLKYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELRECVKQLHWLF 302
SLL+Y +++ PS++AAS FLA++IL P PW S L GY+++EL ECV LH L+
Sbjct: 241 SLLDYECIRFMPSIVAASVIFLARFILRPGVHPWTSSLCECLGYKSAELEECVMILHDLY 300
Query: 303 CN-GCLNLTAIRTKYSQHKFKFVAKKYCPPSIP 334
+ + A+R KY Q KFK+VA P IP
Sbjct: 301 LSRRAASFKAVREKYKQQKFKYVANLPSSPEIP 333
>Medtr3g102530.1 | carboxy-terminal domain cyclin | HC |
chr3:47254814-47252673 | 20130731
Length = 352
Score = 247 bits (631), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 179/267 (67%), Gaps = 3/267 (1%)
Query: 75 SFAHEIYENLRVTE--ETRRPSMDFMEKIQKELNATMRAILIDWLVEVTEEYRLLPDTLF 132
S+A +I LR E + RRP + ++EK+Q+ + A MR IL+DWLVEV EEY+LLP TL
Sbjct: 83 SYASDISNYLRTMEVQKKRRPMIGYIEKVQRGVTANMRGILVDWLVEVAEEYKLLPQTLH 142
Query: 133 LAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCYVTDNTYSKEQILE 192
LAV+YIDR+LS +++ + +LQLLGV+ M+IA+KYEEI PKA DFC +TDNTY +Q+++
Sbjct: 143 LAVSYIDRFLSNESVNRSKLQLLGVSSMLIASKYEEISPPKAVDFCQITDNTYELKQVIK 202
Query: 193 MESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYLAELSLLEYGMLKY 252
ME+ +L L FEM P FL+ +I A + + +++E+L +YLAELSL++Y +++
Sbjct: 203 MEADILKSLNFEMGNPHVNTFLKEYIGPATEDLKTSKLQMEFLCNYLAELSLIDYECIRF 262
Query: 253 KPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELRECVKQLHWLF-CNGCLNLTA 311
PS++AAS FLA++I+ P P S L Y+++EL ECV LH L+ +L A
Sbjct: 263 LPSMVAASVIFLARFIICPGVHPLTSSLSECLFYKSAELEECVLILHDLYLVRRAASLKA 322
Query: 312 IRTKYSQHKFKFVAKKYCPPSIPVEIF 338
+R KY QHKFK VA P IP F
Sbjct: 323 VREKYKQHKFKNVANLPSSPEIPNHYF 349
>Medtr3g102520.1 | carboxy-terminal domain cyclin | HC |
chr3:47250517-47247642 | 20130731
Length = 372
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 184/301 (61%), Gaps = 15/301 (4%)
Query: 53 MKREANEVVDIDYNINDP------------QFCASFAHEIYENLRVTE--ETRRPSMDFM 98
+K A + +D N+N P + +I + LR E + RRP + ++
Sbjct: 56 LKNSATTIPSLDSNLNKPVHTKINAKRDNQHIIQPYVSDISDYLRTMEMQKKRRPMVGYL 115
Query: 99 EKIQKELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVA 158
E +Q+ +++ MR L+DWLVEV +EY+LLP+TL L+V+YIDR+LS + + + +LQLLGV+
Sbjct: 116 ENVQRGISSNMRGTLVDWLVEVADEYKLLPETLHLSVSYIDRFLSIEPVSRSKLQLLGVS 175
Query: 159 CMMIAAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFI 218
M+IA+KYEEI PKA DFC +TDNTY E++L+ME+ +L L FEM P FL+RFI
Sbjct: 176 SMLIASKYEEITPPKAVDFCQITDNTYDLEEVLKMEADILKSLNFEMGNPNVITFLKRFI 235
Query: 219 RVAQQTCEVPLMRLEYLADYLAELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKPWNS 278
+A + + ++ E+L YLA+LSLL+Y ++ PSV+AAS FLA++I+ P PW
Sbjct: 236 GIACENRKNSNLQFEFLCSYLADLSLLDYECTRFLPSVVAASVIFLARFIIRPGAHPWTP 295
Query: 279 MLRHYTGYQASELRECVKQLHWLFCN-GCLNLTAIRTKYSQHKFKFVAKKYCPPSIPVEI 337
L GY ++ L +CV LH L+ + + A+R KY Q+K K VA P IP
Sbjct: 296 SLCECLGYTSANLEDCVIILHDLYMSRKAGSFKAVRDKYKQNKLKCVANLPSSPEIPNHY 355
Query: 338 F 338
F
Sbjct: 356 F 356
>Medtr3g102560.1 | carboxy-terminal domain cyclin | HC |
chr3:47265371-47267354 | 20130731
Length = 324
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/273 (45%), Positives = 182/273 (66%), Gaps = 12/273 (4%)
Query: 71 QFCASFAHEIYENLRVTE-ET-RRPSMDFMEKIQKELNATMRAILIDWLVEVTEEYRLLP 128
+F A Y LR E ET RRP D+M+ +Q++++ MR ILIDWLVEV EEY+L
Sbjct: 59 KFDAPVVSSAYNYLRSIEMETKRRPMKDYMDIVQRDIDPKMRGILIDWLVEVVEEYKLQN 118
Query: 129 DTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCYVTDNTYSKE 188
DTL AV+YIDR+LS I + +LQLLGV+ M IA+KYE+I P E+ C++TDNTY+++
Sbjct: 119 DTLHRAVSYIDRFLSYYPICRVKLQLLGVSSMYIASKYEDINPPHVEELCFITDNTYNRD 178
Query: 189 QILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYLAELSLLEYG 248
++LEME+ +L L ++ +PT + FLR+ I + ++ E+L++YLAELSLL+Y
Sbjct: 179 EVLEMETDILKTLDNDLGSPTVKTFLRQEIAKSASN-----LQFEFLSNYLAELSLLDYA 233
Query: 249 MLKYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELRECVKQLHWLFCN---G 305
+++ PS++AAS T LA++I+ P+ PW S L+ Y+GY+ EL+ECV LH L+ + G
Sbjct: 234 CVRFLPSLVAASITLLARFIVWPKTYPWPSALQEYSGYKPVELKECVLILHDLYMSRREG 293
Query: 306 CLNLTAIRTKYSQHKFKFVAKKYCPPSIPVEIF 338
A R KY Q+K+K+VA PP +P +F
Sbjct: 294 SFE--ATREKYKQYKYKYVANLPSPPHLPSYLF 324
>Medtr3g102540.1 | carboxy-terminal domain cyclin | LC |
chr3:47258291-47259784 | 20130731
Length = 277
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 166/262 (63%), Gaps = 9/262 (3%)
Query: 80 IYENLRVTE--ETRRPSMDFMEKIQKELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNY 137
IY LR E E RRP D+ME +Q+ + +R L+DWLVEV EEY+L DTL LAV+Y
Sbjct: 13 IYTYLRSMELEEKRRPMKDYMEILQRYITPELRGKLVDWLVEVAEEYKLHNDTLHLAVSY 72
Query: 138 IDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSV 197
ID +LS I + L+LLGV+ IA+KYE+I P+ +D C+ T + ++KE++ EME+ +
Sbjct: 73 IDIFLSSHPIRRINLELLGVSSFYIASKYEDITPPQVQDLCFTTRDKFNKEEVQEMENKI 132
Query: 198 LYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYLAELSLLEYGMLKYKPSVI 257
L L F+++ PT FLR+ + ++ E+L +YLAELSLL+Y L + PS++
Sbjct: 133 LKTLDFDLSNPTVMTFLRQ-----ESAKSDSYLQFEFLTNYLAELSLLDYDCLSFLPSLV 187
Query: 258 AASATFLAKYILLPRKKPWNSMLRHYTGYQASELRECVKQLHWLFCN-GCLNLTAIRTKY 316
AAS FLA+ I P+ PW + L+ Y+ Y+ ELRECV LH L + + AIRTKY
Sbjct: 188 AASVVFLARIIFWPKSLPW-ATLQEYSEYKPVELRECVLVLHDLHTSEKGASFKAIRTKY 246
Query: 317 SQHKFKFVAKKYCPPSIPVEIF 338
QH+F++VA PP +P +F
Sbjct: 247 KQHEFEYVADLSSPPRLPSFLF 268
>Medtr5g023790.1 | carboxy-terminal domain cyclin | HC |
chr5:9472333-9468437 | 20130731
Length = 428
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 166/275 (60%), Gaps = 11/275 (4%)
Query: 60 VVDIDY-NINDPQFCASFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILIDWLV 118
V+DID + NDP A + ++Y R E T S ++M + Q ++N MRAIL+DWL+
Sbjct: 155 VMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPNYMAQ-QFDINERMRAILVDWLI 213
Query: 119 EVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFC 178
EV +++ L+ +TLFL VN IDR+L +++++++LQL+G+ M++A KYEE+ P D
Sbjct: 214 EVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLI 273
Query: 179 YVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADY 238
++D Y+++++LEME ++ LKF ++ PTA F+RRF++ AQ +LE LA +
Sbjct: 274 LISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQAD-----RKLELLAFF 328
Query: 239 LAELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELRECVK-Q 297
L ELSL+EY MLK+ PS +AA+A + A+ + K+ W+ +T Y +L EC
Sbjct: 329 LIELSLVEYAMLKFPPSQLAAAAVYTAQCTMYGVKQ-WSKTCEWHTNYSEDQLLECSSLM 387
Query: 298 LHWLFCNGCLNLTAIRTKYSQHKFKFVAKKYCPPS 332
+ + G LT KY KF + AK C P+
Sbjct: 388 VDFHKKAGTGKLTGAHRKYGTSKFSYTAK--CEPA 420
>Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731
Length = 1318
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 165/283 (58%), Gaps = 20/283 (7%)
Query: 53 MKREANEVVDIDYNINDPQFCA-SFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRA 111
+ + E+VDID + + A + +IY+ ++ E RP D+M+ Q E+N MR
Sbjct: 175 LTNKPKEIVDIDAGDTNNELAAVEYLEDIYKFYKIVENESRPH-DYMDS-QPEINERMRG 232
Query: 112 ILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICA 171
ILIDWLV+V ++ L P+TL+L +N +DR+L+ + ++ LQL+G++ M++A+KYEEI
Sbjct: 233 ILIDWLVDVHSKFELSPETLYLTINIVDRFLAVNLVSRRELQLVGISAMLMASKYEEIWP 292
Query: 172 PKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMR 231
P+ DF ++D YS EQIL ME ++L L++ +T PT FL RFI+ A + VP +
Sbjct: 293 PEVNDFVCLSDRAYSHEQILIMEKTILGKLEWTLTVPTPFVFLVRFIKAASVSA-VPSDQ 351
Query: 232 --LEYLADYLAELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKP-WNSMLRHYTGYQA 288
LE +A +L+EL ++ Y L+Y PS++AASA + A+ L K P WN L+ +TGY
Sbjct: 352 GDLEMMAHFLSELGMMHYATLRYCPSMLAASAVYAARSTL--SKTPVWNETLKMHTGYSE 409
Query: 289 SELRECVKQLHWLFCNGCLNLTAIRTKYSQHKFKFVAKKYCPP 331
+L +C + L + + K K V KKY P
Sbjct: 410 EQLMDCARL-----------LVSFHSGAENGKLKVVYKKYSDP 441
>Medtr5g088980.1 | carboxy-terminal domain cyclin | HC |
chr5:38636983-38633820 | 20130731
Length = 421
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 186/321 (57%), Gaps = 22/321 (6%)
Query: 11 EFEYADNGDVVSTKSIENRACGILSISDSSKIAGRIHGSDAIMKREANEVVDIDYNINDP 70
E E V + I R+ + + SS ++ R + ++ ++ V +ID + +
Sbjct: 101 ESEEVKEKQAVRERKIRERSTKKIVKTFSSVLSARSKAACRVVPKDF--VENIDASDKEN 158
Query: 71 QFCAS-FAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILIDWLVEVTEEYRLLPD 129
+ A+ + +IY+ +++E+ R D+M Q ++N MRAILIDWL+EV ++ L+P+
Sbjct: 159 ELAATEYIDDIYKYYKLSEDDVR-VHDYMAS-QPDINVKMRAILIDWLIEVHRKFELMPE 216
Query: 130 TLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCYVTDNTYSKEQ 189
T +L +N +DR+LS KA+ ++ LQL+G++ M+IA+KYEEI AP+ DF ++DN Y +EQ
Sbjct: 217 TFYLTLNIVDRFLSTKAVPRKELQLVGISSMLIASKYEEIWAPEVNDFVCISDNAYVREQ 276
Query: 190 ILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYLAELSLLEYGM 249
+L ME ++L L++ +T PT FL R+I+ + + + +E + ++LAELS++ Y
Sbjct: 277 VLVMEKTILRNLEWYLTVPTPYVFLVRYIKASTPSDK----EMESMVNFLAELSMMHYAT 332
Query: 250 L-KYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELRECVKQLHWLFCNGCLN 308
+ Y PS+IAASA + A+ L R W L+HYTGY +LR+C K
Sbjct: 333 VSSYCPSMIAASAVYAARST-LERSPFWTDTLKHYTGYSEEQLRDCAKL----------- 380
Query: 309 LTAIRTKYSQHKFKFVAKKYC 329
+ + + + + + + KK+C
Sbjct: 381 MASFHSAAPESRLRAIYKKFC 401
>Medtr8g074000.1 | carboxy-terminal domain cyclin | HC |
chr8:31292669-31296642 | 20130731
Length = 434
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 164/279 (58%), Gaps = 11/279 (3%)
Query: 56 EANEVVDIDY-NINDPQFCASFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILI 114
E ++DID + N+ + +++ R E S +M++ Q +LN MRAIL+
Sbjct: 155 EGEMILDIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSPAYMDE-QLDLNERMRAILV 213
Query: 115 DWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKA 174
DWL+EV +++ L+ +TLFL VN IDR+L+ + +++++LQL+G+ M++A KYEE+ P
Sbjct: 214 DWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVV 273
Query: 175 EDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEY 234
D ++ D Y+++ ILEME S+L L++ M+ PTA F+RRF++ AQ +LE
Sbjct: 274 SDLIHIADRAYTRKDILEMEKSMLNTLQYNMSLPTAYVFMRRFLKAAQAD-----KKLEL 328
Query: 235 LADYLAELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELREC 294
+A +L ELSL+EY MLK+ PS++AA+A + A+ + K WN +T Y +L EC
Sbjct: 329 VAFFLVELSLVEYEMLKFPPSLVAAAAVYTAQ-CTVSGFKHWNKTCEWHTNYSEDQLLEC 387
Query: 295 VKQLHWLFCN-GCLNLTAIRTKYSQHKFKFVAKKYCPPS 332
+ G LT + KY KF F AK C P+
Sbjct: 388 SMLMVGFHQKAGAGKLTGVHRKYGSAKFSFTAK--CEPA 424
>Medtr5g023790.3 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468202 | 20130731
Length = 381
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 149/233 (63%), Gaps = 8/233 (3%)
Query: 60 VVDIDY-NINDPQFCASFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILIDWLV 118
V+DID + NDP A + ++Y R E T S ++M + Q ++N MRAIL+DWL+
Sbjct: 155 VMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPNYMAQ-QFDINERMRAILVDWLI 213
Query: 119 EVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFC 178
EV +++ L+ +TLFL VN IDR+L +++++++LQL+G+ M++A KYEE+ P D
Sbjct: 214 EVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLI 273
Query: 179 YVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADY 238
++D Y+++++LEME ++ LKF ++ PTA F+RRF++ AQ +LE LA +
Sbjct: 274 LISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQAD-----RKLELLAFF 328
Query: 239 LAELSLLEYGMLKYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASEL 291
L ELSL+EY MLK+ PS +AA+A + A+ + K+ W+ +T Y +L
Sbjct: 329 LIELSLVEYAMLKFPPSQLAAAAVYTAQCTMYGVKQ-WSKTCEWHTNYSEDQL 380
>Medtr5g023790.2 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468437 | 20130731
Length = 357
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 111/164 (67%), Gaps = 2/164 (1%)
Query: 60 VVDIDY-NINDPQFCASFAHEIYENLRVTEETRRPSMDFMEKIQKELNATMRAILIDWLV 118
V+DID + NDP A + ++Y R E T S ++M + Q ++N MRAIL+DWL+
Sbjct: 155 VMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPNYMAQ-QFDINERMRAILVDWLI 213
Query: 119 EVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFC 178
EV +++ L+ +TLFL VN IDR+L +++++++LQL+G+ M++A KYEE+ P D
Sbjct: 214 EVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLI 273
Query: 179 YVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQ 222
++D Y+++++LEME ++ LKF ++ PTA F+RRF++ AQ
Sbjct: 274 LISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQ 317
>Medtr3g060410.1 | carboxy-terminal domain cyclin | LC |
chr3:23691060-23693543 | 20130731
Length = 362
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 118/195 (60%), Gaps = 7/195 (3%)
Query: 104 ELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSG---KAIIQQRLQLLGVACM 160
++++ +R ++DWL++ + +L+P+TL+L VN +DR LS + ++L+L+G++ +
Sbjct: 130 KVDSQLRKNVVDWLIQTHYQQKLMPETLYLCVNILDRVLSKINFEVKTMEKLKLIGLSSL 189
Query: 161 MIAAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRV 220
++A+KYE+ A D Y+ D Y E+I +ME +L L + +T PT FL R IR
Sbjct: 190 LLASKYEQRRAVGVYDVEYLADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVRNIRA 249
Query: 221 AQQTCEVPLMRLEYLADYLAELSLLEYGML-KYKPSVIAASATFLAKYILLPRKKPWNSM 279
+ E +M E++ + +ELSL + ++ YKPS+IAA A +LA++I + R W++
Sbjct: 250 CNLSDEDKIM--EHMVFFFSELSLTNHSIVCDYKPSMIAACAVYLARFI-VGRYPFWSND 306
Query: 280 LRHYTGYQASELREC 294
L+ TGY +L C
Sbjct: 307 LKMCTGYSEDKLLSC 321
>Medtr3g060770.1 | carboxy-terminal domain cyclin | LC |
chr3:24109546-24108680 | 20130731
Length = 288
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 130/233 (55%), Gaps = 14/233 (6%)
Query: 67 INDPQFCASFAHEIYENLRVTE-ETRRPSMDFMEKIQKELNATMRAILIDWLVEVTEEYR 125
I++ Q + + ++Y+ + E + R S F +++ MR I++DWL++ + +
Sbjct: 23 ISNKQKFSDYDDDLYKFYHIEESQIRANSKGF------KVDFLMRKIVVDWLIQTHYKQK 76
Query: 126 LLPDTLFLAVNYIDRYLSG---KAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCYVTD 182
L+P+TL+L VN +DR+LS + +L+L+G++ +++A+KYE+ D + D
Sbjct: 77 LMPETLYLCVNILDRFLSKIEFEVTTMDKLKLMGLSSLLLASKYEQRSVVGVYDIEGMAD 136
Query: 183 NTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYLAEL 242
Y ++I +ME +L L + +T PT FL R IR + E +M E + + +EL
Sbjct: 137 YIYMPKEICQMEKLILQELGWILTVPTPYVFLIRNIRTCLLSDEDKIM--EKMVFFFSEL 194
Query: 243 SLLEYGML-KYKPSVIAASATFLAKYILLPRKKPWNSMLRHYTGYQASELREC 294
SL + ++ YKPS+IAA + + A+++ + R W++ L+ TGY +L C
Sbjct: 195 SLTNHSIVCDYKPSMIAACSVYCARFV-VERYPFWSNDLKMCTGYSEDKLLSC 246
>Medtr3g060820.1 | carboxy-terminal domain cyclin | LC |
chr3:24117223-24116390 | 20130731
Length = 277
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 112/195 (57%), Gaps = 7/195 (3%)
Query: 104 ELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSG---KAIIQQRLQLLGVACM 160
+++ MR ++DWL++ E +L+P+TL+L VN +DR LS + +L+L+G++ +
Sbjct: 45 KVDFQMRKNVVDWLIQTHYEQKLMPETLYLCVNVLDRVLSKIKFEVTTVDKLKLIGLSSL 104
Query: 161 MIAAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRV 220
++A+KYE+ D Y+ D Y E+I +ME +L L + +T PT FL R IR
Sbjct: 105 LLASKYEQRSVVGVYDVEYMADYIYMPEEICQMEKLILQKLGWILTVPTPYVFLVRNIRA 164
Query: 221 AQQTCEVPLMRLEYLADYLAELSLLEYGML-KYKPSVIAASATFLAKYILLPRKKPWNSM 279
+ E +M E + + +E+SL + ++ YKPS+IAA + + A+++ + R W++
Sbjct: 165 CLLSDEDKIM--ENMVFFFSEVSLTNHSIVCDYKPSLIAACSVYCARFV-VERYPFWSND 221
Query: 280 LRHYTGYQASELREC 294
L+ TGY L C
Sbjct: 222 LKICTGYSEENLWSC 236
>Medtr3g061680.1 | carboxy-terminal domain cyclin | LC |
chr3:24614151-24614996 | 20130731
Length = 281
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 113/195 (57%), Gaps = 7/195 (3%)
Query: 104 ELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSG---KAIIQQRLQLLGVACM 160
+++ MR ++DWL++ E +L+P+TL+L VN +DR LS + +L+L+G++ +
Sbjct: 45 KVDFQMRMNVVDWLIQTHYEQKLMPETLYLCVNILDRVLSKIKFEVTTMDKLKLIGLSSL 104
Query: 161 MIAAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRV 220
++A+KYE+ A D Y+ D Y E+I +ME +L L + +T PT FL R +R
Sbjct: 105 LLASKYEQRSAVGVYDVEYMADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVRNMRA 164
Query: 221 AQQTCEVPLMRLEYLADYLAELSLLEYGML-KYKPSVIAASATFLAKYILLPRKKPWNSM 279
+ + +M E + + +ELSL ++ YKPS+IAA + + A+++ + R W++
Sbjct: 165 CLLSDQDKIM--ENMVFFFSELSLTNQSIVCDYKPSMIAACSVYCARFV-VGRYPFWSND 221
Query: 280 LRHYTGYQASELREC 294
L+ TGY +L C
Sbjct: 222 LKMCTGYSEEKLLSC 236
>Medtr3g460990.1 | carboxy-terminal domain cyclin | LC |
chr3:24061471-24062322 | 20130731
Length = 283
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 113/195 (57%), Gaps = 7/195 (3%)
Query: 104 ELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSG---KAIIQQRLQLLGVACM 160
++++ +R ++DWL++ E +L+P+T +L VN +DR LS + ++L+L+G++ +
Sbjct: 51 KVDSQIRKNVVDWLIQTHYEQKLMPETFYLCVNILDRVLSKINFEVKTMEKLKLIGLSSL 110
Query: 161 MIAAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRV 220
++A+KYE+ A Y+ D Y E+I +ME +L L + +T PT FL R ++
Sbjct: 111 LLASKYEQRKAVGVYHVEYMADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVRNVKA 170
Query: 221 AQQTCEVPLMRLEYLADYLAELSLLEYGML-KYKPSVIAASATFLAKYILLPRKKPWNSM 279
+ E +M E + + +ELSL + ++ YKPS+IAA + + A+++ + R W++
Sbjct: 171 CVSSDEDKIM--ENMVFFFSELSLTNHSIVCDYKPSLIAACSVYCARFV-VERYPFWSND 227
Query: 280 LRHYTGYQASELREC 294
L+ TGY L C
Sbjct: 228 LKMCTGYSEENLLSC 242
>Medtr3g060400.1 | carboxy-terminal domain cyclin | LC |
chr3:23689234-23690085 | 20130731
Length = 283
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 113/195 (57%), Gaps = 7/195 (3%)
Query: 104 ELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSG---KAIIQQRLQLLGVACM 160
++++ +R ++DWL++ E +L+P+T +L VN +DR LS + ++L+L+G++ +
Sbjct: 51 KVDSQIRKNVVDWLIQTHYEQKLMPETFYLCVNILDRVLSKINFEVKTMEKLKLIGLSSL 110
Query: 161 MIAAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRV 220
++A+KYE+ A Y+ D Y E+I +ME +L L + +T PT FL R ++
Sbjct: 111 LLASKYEQRKAVGVYHVEYMADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVRNVKA 170
Query: 221 AQQTCEVPLMRLEYLADYLAELSLLEYGML-KYKPSVIAASATFLAKYILLPRKKPWNSM 279
+ E +M E + + +ELSL + ++ YKPS+IAA + + A+++ + R W++
Sbjct: 171 CVSSDEDKIM--ENMVFFFSELSLTNHSIVCDYKPSLIAACSVYCARFV-VERYPFWSND 227
Query: 280 LRHYTGYQASELREC 294
L+ TGY L C
Sbjct: 228 LKMCTGYSEENLLSC 242
>Medtr6g045270.1 | carboxy-terminal domain cyclin | LC |
chr6:11390216-11391181 | 20130731
Length = 321
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 27/232 (11%)
Query: 105 LNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSG---KAIIQQRLQLLGVACMM 161
+N R +LID +++ L P+TL+L VN IDR+LS + ++++ + ++
Sbjct: 70 INCDERKLLIDSIIDAHYALNLAPETLYLCVNIIDRFLSKLNPPSTPMEKIKFVPHISLL 129
Query: 162 IAAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVA 221
+A+KYE+ D ++ E + E E +L L + +T T FL R I+
Sbjct: 130 LASKYEQRHKLHVRDLVHI-----PPEVVCETEKLILQKLDWNLTVTTPYVFLVRNIKDE 184
Query: 222 QQTCEVPLMRLEYLADYLAELSLLEYGML-KYKPSVIAASATFLAKYILLPRKKPWNSML 280
+ +E + + +ELSL Y ++ YKPS+IAASA + A+ I++ R WN+ L
Sbjct: 185 DKM-------MENMVFFFSELSLTHYSIVCDYKPSMIAASAVYCAR-IVIGRYPLWNNDL 236
Query: 281 R--HYTGYQASELRECVKQLHWLFCNGCLNLTAIRTKYSQHKF-KFVAKKYC 329
+ TGY ELR C + L CN I + H F KF ++ YC
Sbjct: 237 KICTGTGYSEKELRSCAMVMIEL-CN------EICRDGTMHVFRKFSSRDYC 281
>Medtr1g032850.1 | carboxy-terminal domain cyclin | HC |
chr1:11757673-11761366 | 20130731
Length = 555
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 18/207 (8%)
Query: 94 SMDFMEKIQKELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLS-GKAIIQQRL 152
+ DF E Q+ R+ ++ W+VE + +L P+T+FLA+N +DR+LS G ++ L
Sbjct: 362 ATDFAEVFQQ------RSRMVHWIVEHSYRKQLRPETMFLAINLLDRFLSKGYFKAERNL 415
Query: 153 QLLGVACMMIAAKYEE---ICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPT 209
Q++G+AC+ +A + EE ++F Y+ + YS+ +++ ME V L+FE PT
Sbjct: 416 QIVGIACLTLATRIEENQQYNRVNQKNF-YIEKSVYSRCEVVAMEWMVQEVLEFECFHPT 474
Query: 210 ARCFLRRFIRVAQQTCEVPLMRLEYLADYLAELSLLEYGMLKYKPSVIAASATFLAKYIL 269
FL +++ A V E LA L+L L Y PS IAA+ LA L
Sbjct: 475 IYNFLCFYLKAANADAVV-----EKRVTCLALLALSGPDQLCYWPSTIAAAIVILASLEL 529
Query: 270 LPRKKPWNSMLRHYTGYQASELRECVK 296
+K + ++ + + L EC++
Sbjct: 530 --NQKASHKVIGIHIRSKEENLHECME 554
>Medtr5g011900.1 | amine-terminal domain cyclin | LC |
chr5:3502095-3501016 | 20130731
Length = 241
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
Query: 102 QKELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMM 161
Q + + R L+D ++ + +Y + ++LFLA+N +DR+L +++ +++L+L+G+ +
Sbjct: 95 QSNIYISRRPKLLDRVIGIHTKYAISQESLFLAMNIVDRFLVARSVREEKLRLVGMGAWL 154
Query: 162 IAAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVA 221
IA KY I K + F + DN Y++ QIL +E L ++T T FL F +
Sbjct: 155 IAYKYGGIWHLKVDTFVTLPDNPYTRAQILWIEEETSGALNRKLTVSTPFHFLSLFFKAP 214
Query: 222 QQTCEVPLMRLEYLADYLAELSLLEYGMLKYKP 254
+ LE + +L+EL GM+ + P
Sbjct: 215 PDDTYNNFL-LENMTYFLSEL-----GMINFTP 241
>Medtr8g063120.2 | carboxy-terminal domain cyclin | HC |
chr8:26438234-26434719 | 20130731
Length = 283
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 93 PSMDFMEKIQ-KELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQR 151
P D++ + Q + L ++ R I W+++V E Y P T +L+VNY+DR+L + + +
Sbjct: 76 PGFDYVSRFQSRSLESSTREEAIAWILKVHEYYGFQPLTAYLSVNYMDRFLDSRPLPESN 135
Query: 152 ---LQLLGVACMMIAAKYEEICAPKAEDF-CYVTDNTYSKEQILEMESSVLYFLKFEMTA 207
LQLL VAC+ +AAK EE P DF + IL ME VL L + + +
Sbjct: 136 GWPLQLLSVACLSLAAKMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWRLRS 195
Query: 208 PTARCFLRRF 217
T FL F
Sbjct: 196 ITPLSFLSFF 205
>Medtr8g063120.1 | carboxy-terminal domain cyclin | HC |
chr8:26438234-26434719 | 20130731
Length = 355
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 93 PSMDFMEKIQ-KELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQR 151
P D++ + Q + L ++ R I W+++V E Y P T +L+VNY+DR+L + + +
Sbjct: 76 PGFDYVSRFQSRSLESSTREEAIAWILKVHEYYGFQPLTAYLSVNYMDRFLDSRPLPESN 135
Query: 152 ---LQLLGVACMMIAAKYEEICAPKAEDF-CYVTDNTYSKEQILEMESSVLYFLKFEMTA 207
LQLL VAC+ +AAK EE P DF + IL ME VL L + + +
Sbjct: 136 GWPLQLLSVACLSLAAKMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWRLRS 195
Query: 208 PTARCFLRRF 217
T FL F
Sbjct: 196 ITPLSFLSFF 205
>Medtr5g044040.1 | amine-terminal domain cyclin | LC |
chr5:19364442-19364868 | 20130731
Length = 128
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 131 LFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPKAEDFCYVTDNTYSKEQI 190
L L +N +DR+L+ + ++ LQL+G++ M++ +KYEEI P+ DF ++D YS EQI
Sbjct: 7 LCLTINIVDRFLAINLVSRRELQLVGISAMLMTSKYEEIWPPEVNDFVCLSDRAYSHEQI 66
Query: 191 LEMESSVLYFLKFEMTA 207
L ME +++ L++ +T
Sbjct: 67 LIMEKTIMGMLEWTLTV 83
>Medtr3g100710.1 | carboxy-terminal domain cyclin | HC |
chr3:46343463-46340451 | 20130731
Length = 362
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Query: 93 PSMDFMEKIQ-KELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQR 151
P D++ K++ +L+ R +IDW+ +V + P +L++NY+DR+LS + R
Sbjct: 79 PGADYLNKLRFGDLDFEARNEVIDWIQKVRAHFGFGPLCAYLSINYMDRFLSVYEFPKGR 138
Query: 152 ---LQLLGVACMMIAAKYEEICAPKAEDFCYVTDN-TYSKEQILEMESSVLYFLKFEMTA 207
+QLL VAC+ +AAK EE P+ D + + I ME VL LK+ M A
Sbjct: 139 AWTMQLLAVACLSLAAKVEETAVPQPLDLQIGESKFVFEAKTIQRMELLVLSTLKWRMQA 198
Query: 208 PTARCFLRRFIRVAQQTCEVPLMRLEYLADYLAELSLLEYGMLKYKPSVIAAS 260
T F+ F+ + + L + L ++ L++KPS IAA+
Sbjct: 199 ITPFSFIECFLSKIKDDDKSSLSSSISRSTQLISSTIKGLDFLEFKPSEIAAA 251
>Medtr5g015670.1 | carboxy-terminal domain cyclin | HC |
chr5:5464504-5462357 | 20130731
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 16/168 (9%)
Query: 106 NATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQR---LQLLGVACMMI 162
NA + AI DW+ ++ T +L++NY DR+LS ++I + + +QLL VAC+ I
Sbjct: 101 NARLHAI--DWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSI 158
Query: 163 AAKYEEICAPKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRV-- 220
AAK EE P + Y + + + I ME +L L+++M PT +L F
Sbjct: 159 AAKMEEQSVPPLSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFC 216
Query: 221 -AQQTCEVPLMRLEYLADYLAELSLLEYGMLKYKPSVIAASATFLAKY 267
++ + +++ + ++ ++ +PS I ASA+ LA +
Sbjct: 217 NGSRSETIITKATQHIVTMVK-----DFNLMNQRPSTI-ASASILAAF 258
>Medtr5g032550.1 | carboxy-terminal domain cyclin | HC |
chr5:13982616-13985265 | 20130731
Length = 346
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 8/172 (4%)
Query: 61 VDIDYNINDPQFC-ASFAHEIYENLRVTEETRRPSMDFMEKIQK-ELNATMRAILIDWLV 118
V++D +D C + + EI + + E+ P D++ +++ +L+ ++R +DW+
Sbjct: 41 VNLDNVGSDSFLCFVAQSEEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIW 100
Query: 119 EVTEEYRLLPDTLFLAVNYIDRYLSGKAI---IQQRLQLLGVACMMIAAKYEEICAPKAE 175
+ Y P +L L+VNY+DR+LS + +QLL VAC +AAK EE+ P++
Sbjct: 101 KAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSV 160
Query: 176 DFCYVTDN-TYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCE 226
D + + I ME +L L ++M A T F+ F+ A+ +CE
Sbjct: 161 DLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFL--AKISCE 210
>Medtr5g032550.2 | carboxy-terminal domain cyclin | HC |
chr5:13982619-13985265 | 20130731
Length = 272
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 8/172 (4%)
Query: 61 VDIDYNINDPQFC-ASFAHEIYENLRVTEETRRPSMDFMEKIQK-ELNATMRAILIDWLV 118
V++D +D C + + EI + + E+ P D++ +++ +L+ ++R +DW+
Sbjct: 41 VNLDNVGSDSFLCFVAQSEEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIW 100
Query: 119 EVTEEYRLLPDTLFLAVNYIDRYLSGKAI---IQQRLQLLGVACMMIAAKYEEICAPKAE 175
+ Y P +L L+VNY+DR+LS + +QLL VAC +AAK EE+ P++
Sbjct: 101 KAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSV 160
Query: 176 DFCYVTDN-TYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCE 226
D + + I ME +L L ++M A T F+ F+ A+ +CE
Sbjct: 161 DLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFL--AKISCE 210
>Medtr4g080990.1 | carboxy-terminal domain cyclin | HC |
chr4:31294716-31295744 | 20130731
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 96 DFMEKIQ-KELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQR--- 151
D++ +++ +L+ R IDW+ +V + P ++L++NY+DR+LS ++R
Sbjct: 77 DYLNRLKFGDLDFGARNEAIDWIQKVQSHFGFGPLCVYLSINYMDRFLSAYQFPERRDWS 136
Query: 152 LQLLGVACMMIAAKYEEICAPKAEDFCYVTDN-TYSKEQILEMESSVLYFLKFEMTAPTA 210
+QLL VAC+ +AAK +E P+ + + + I ++E VL LK+ M A T
Sbjct: 137 MQLLAVACLSLAAKVDETDVPRILELQIGESKFVFEAKTIQKIELLVLTTLKWRMQAITP 196
Query: 211 RCFLRRFIRVAQQTCEVPLMRLEYLADYLAELSLLEYGMLKYKPSVIAAS-ATFLAK 266
F+ F+ + L ++ L++KPS IAA+ AT++ +
Sbjct: 197 FSFIEYFLSKINDDKSSLNNSIILQCTQLISSTIKSPDFLEFKPSEIAAAVATYVVE 253
>Medtr3g103080.1 | carboxy-terminal domain cyclin | HC |
chr3:47495355-47493059 | 20130731
Length = 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
Query: 114 IDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQR---LQLLGVACMMIAAKYEEIC 170
I+W+++ E +T +L+V Y+DR+LS I ++ ++LL +AC+ +AAK EE
Sbjct: 71 INWILKKREALDFHFETAYLSVTYLDRFLSKHFIDGEKDWAMRLLSIACLSLAAKMEECN 130
Query: 171 APKAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLM 230
P+ F D + + I +ME VL L + M T FL FI+ P+
Sbjct: 131 VPELSQFQLEDDYVFEGKVIQKMELFVLSSLDWNMGIITPFSFLSYFIKKFSNESPSPI- 189
Query: 231 RLEYLADYLAELSLLEYGMLKYKPS 255
+ + + + E+ ++ +KPS
Sbjct: 190 -ISNTMHPIFTVVMEEFNLMDHKPS 213
>Medtr2g089490.2 | carboxy-terminal domain cyclin | HC |
chr2:37834166-37831680 | 20130731
Length = 299
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 83 NLRVTEETRRPSMDFMEKIQ-KELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRY 141
+L + E P +++ + ++ E +A++R I + +++ + P +LA+NY+DR+
Sbjct: 23 SLFLIESDHIPPLNYFQNLKSNEFDASVRTDFISLISQLSCNFD--PFVTYLAINYLDRF 80
Query: 142 LSGKAIIQQRL---QLLGVACMMIAAKY--EEICAPKAEDFCYVTDN--TYSKEQILEME 194
L+ + I+Q + +LL V C +A K E A + D + + I ME
Sbjct: 81 LANQGILQPKPWANKLLAVTCFSLAVKMLKTEYSATDVQALMNHGDGGFIFETQTIKRME 140
Query: 195 SSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYLAEL---SLLEYGMLK 251
+ VL L++ M + T F+ F + + + L+ L D +E+ S + +++
Sbjct: 141 ALVLGALQWRMRSITPFSFIPYFTNLFM----LDDITLKVLKDRASEIILKSQKDVKVME 196
Query: 252 YKPSVIAASATFLAKYILLPRKKP 275
+KPS++AAS+ + + L P + P
Sbjct: 197 FKPSIVAASSLLYSSHELFPFQYP 220
>Medtr2g089490.1 | carboxy-terminal domain cyclin | HC |
chr2:37834166-37831665 | 20130731
Length = 302
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 83 NLRVTEETRRPSMDFMEKIQ-KELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRY 141
+L + E P +++ + ++ E +A++R I + +++ + P +LA+NY+DR+
Sbjct: 23 SLFLIESDHIPPLNYFQNLKSNEFDASVRTDFISLISQLSCNFD--PFVTYLAINYLDRF 80
Query: 142 LSGKAIIQQRL---QLLGVACMMIAAKY--EEICAPKAEDFCYVTDN--TYSKEQILEME 194
L+ + I+Q + +LL V C +A K E A + D + + I ME
Sbjct: 81 LANQGILQPKPWANKLLAVTCFSLAVKMLKTEYSATDVQALMNHGDGGFIFETQTIKRME 140
Query: 195 SSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYLAEL---SLLEYGMLK 251
+ VL L++ M + T F+ F + + + L+ L D +E+ S + +++
Sbjct: 141 ALVLGALQWRMRSITPFSFIPYFTNLFM----LDDITLKVLKDRASEIILKSQKDVKVME 196
Query: 252 YKPSVIAASATFLAKYILLPRKKP 275
+KPS++AAS+ + + L P + P
Sbjct: 197 FKPSIVAASSLLYSSHELFPFQYP 220
>Medtr2g011500.1 | carboxy-terminal domain cyclin | HC |
chr2:2803180-2800861 | 20130731
Length = 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 38/225 (16%)
Query: 63 IDYNINDPQFCASFAHEIYENLRVTE----ETRR-PSMDFMEKIQKELNATMRAILIDWL 117
+D+++++P ASF + +N +TE ET PS + + I E I +
Sbjct: 44 MDFDLDNP--LASFKEQ--QNCTITELFASETDHMPSPNCLNSIHCEA--------ISLI 91
Query: 118 VEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQR---LQLLGVACMMIAAKYEEICAPKA 174
++V L P +LA+NY+ R++S + Q + ++L+ ++C+ +A+K + P +
Sbjct: 92 LQVQHSCNLDPFIAYLAINYLHRFMSKQEFPQGKPWLIRLIVISCLSLASKMKNTHLPFS 151
Query: 175 E---DFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIRVAQQTCEVPLMR 231
+ + C ++ E I +ME +L L + M + T FL FI +AQ ++
Sbjct: 152 KLQKEGC-----NFNGETIQKMELVILGALDWRMRSITPFPFLNFFISLAQ-------IK 199
Query: 232 LEYLADYLAELSLLEYG---MLKYKPSVIAASATFLAKYILLPRK 273
L D AE+ + L+YKPS +AA++ A Y L P++
Sbjct: 200 DRSLKDRAAEIIFNVHNDIKFLEYKPSTVAAASLIYASYELFPQQ 244
>Medtr5g035360.1 | carboxy-terminal domain cyclin | HC |
chr5:15376779-15381259 | 20130731
Length = 334
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 97 FMEKIQKELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQR---LQ 153
F++ ++ R I W+++V Y P T +LAVNY+DR+L+ + + Q LQ
Sbjct: 64 FVKMKSSSFDSDARDESIRWILKVQGYYGFQPVTAYLAVNYMDRFLNSRRLPQTNGWPLQ 123
Query: 154 LLGVACMMIAAKYEEICAPKAEDFCYVTDNTYSKEQIL--EMESSVLYFLKFEMTAPTAR 211
LL VAC+ +AAK EE P D V Y E I ME VL L + + + T
Sbjct: 124 LLSVACLSLAAKMEETLVPSLLDL-QVEGVKYMFEPITIRRMELLVLSVLDWRLRSVTPF 182
Query: 212 CFLRRF 217
FL F
Sbjct: 183 SFLSFF 188
>Medtr1g107535.1 | carboxy-terminal domain cyclin | HC |
chr1:48851792-48849419 | 20130731
Length = 384
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 114 IDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQR---LQLLGVACMMIAAKYEEIC 170
++W+++V Y T LAVNY+DR+L +++ +QL+ V C+ +AAK EE
Sbjct: 111 VEWMLKVNAHYGFSALTATLAVNYLDRFLLSFHFQKEKPWMIQLVAVTCISLAAKVEETQ 170
Query: 171 AP-----KAEDFCYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIR 219
P + +D YV + + I ME +L LK++M T FL IR
Sbjct: 171 VPLLLDLQVQDTKYV----FEAKTIQRMELLILSTLKWKMHPVTTHSFLDHIIR 220
>Medtr5g065830.1 | carboxy-terminal domain cyclin | LC |
chr5:27701765-27698581 | 20130731
Length = 352
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 82 ENLRVTEET---RRPSMDFMEKIQK-ELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNY 137
ENL+V E P+ D++ +++ EL+ R IDW+ + + P ++LA+ Y
Sbjct: 56 ENLKVLIEKECHHLPASDYVNRLKNGELDLQGRMESIDWMEKAGLYFGFGPLCIYLAIRY 115
Query: 138 IDRYLSGKAIIQQR---LQLLGVACMMIAAKYEEICAPKAEDFCYVTDN-TYSKEQILEM 193
+DR+LS ++++R +QLL C+ +AAK +E+ P++ D + K+ +
Sbjct: 116 MDRFLSVVDMLKERKWSIQLLAFCCLYLAAKIDEVVVPRSVDMQMDEKKYLFDKKTLRTT 175
Query: 194 ESSVLYFLKFEMTAPTARCFLRRFIR 219
E +L L + M A T ++ F+
Sbjct: 176 ELLILSTLNWRMQAITPFSYIDFFLN 201
>Medtr4g094942.1 | carboxy-terminal domain cyclin | HC |
chr4:39336584-39338672 | 20130731
Length = 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 7/178 (3%)
Query: 88 EETRRPSMDFMEKIQKELNATMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAI 147
+ET + DF+ I LN + R ++W+ V Y T LAVNY DR+++
Sbjct: 63 KETHLINDDFV--IDGSLNES-RVEGVNWVSRVCAHYGFSTLTTVLAVNYFDRFVTSLKF 119
Query: 148 IQQR---LQLLGVACMMIAAKYEEICAPKAEDFCYVTDN-TYSKEQILEMESSVLYFLKF 203
+ + QL VAC+ +AAK EE P DF + + I ME VL LK+
Sbjct: 120 QKDKPWMTQLTAVACLSLAAKMEETHVPLLLDFQVEESRFVFEAKTIQRMELLVLSTLKW 179
Query: 204 EMTAPTARCFLRRFIRVAQQTCEVPLMRLEYLADYLAELSLLEYGMLKYKPSVIAASA 261
M T F +R + + L + + M+ Y PS +AA+
Sbjct: 180 RMLPVTPISFFEHIVRRLGLKSRLHWEFMWRCEKVLLHVIVDSRVMMSYLPSTLAAAT 237
>Medtr2g005960.1 | amine-terminal domain cyclin | LC |
chr2:402942-401842 | 20130731
Length = 234
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 114 IDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRLQLLGVACMMIAAKYEEICAPK 173
+DWLV+V L + LFL +N IDRYLS +I ++ L L+ + M +A KY+EI K
Sbjct: 173 VDWLVKVHYRLELQTEALFLTINIIDRYLSLTSIPKRDLMLVAICSMSLADKYKEISYRK 232
Query: 174 A 174
Sbjct: 233 V 233
>Medtr8g068950.1 | carboxy-terminal domain cyclin | LC |
chr8:28849604-28851600 | 20130731
Length = 374
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 109 MRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQRL---QLLGVACMMIAAK 165
+R I+W+ + Y P LAVNY+DR+LS + L +LL +AC+ IAAK
Sbjct: 107 IRREAIEWMWKAAACYGFGPCIFSLAVNYVDRFLSVYKFERGHLWSEKLLALACLSIAAK 166
Query: 166 YEEICA-PKAEDF-----CYVTDNTYSKEQILEMESSVLYFLKFEMTAPTARCFLRRFIR 219
EE PK+ DF +V + + I ME +L L +EM + T F+ F+
Sbjct: 167 LEEGKKLPKSIDFKLGELVFV----FETKGITTMELLILDHLNWEMQSSTPCSFVDYFLS 222
Query: 220 VAQQTCEVPLMRLEYLADYLAELSLLEY-GMLKYKPSVIAASA 261
+ P L L + +Y L++KPS IAA+
Sbjct: 223 KITSEQQFPSGS-SMLNSIDLILKMPKYIDFLEFKPSEIAAAT 264
>Medtr3g102310.1 | carboxy-terminal domain cyclin | HC |
chr3:47150613-47152390 | 20130731
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 108 TMRAILIDWLVEVTEEYRLLPDTLFLAVNYIDRYLSGKAIIQQR---LQLLGVACMMIAA 164
T R I+W+++V Y T LAVNY+DR+L ++ QL VAC+ +AA
Sbjct: 83 TARRESIEWILKVNAHYSFSALTSVLAVNYLDRFLFSFRFQNEKPWMTQLAAVACLSLAA 142
Query: 165 KYEEICAPKAEDFCYVTDNTY--SKEQILEMESSVLYFLKFEMTAPTARCFLRRFIR 219
K EE P D V ++ Y + I +ME +L L ++M T F+ IR
Sbjct: 143 KMEETHVPLLLDL-QVEESRYLFEAKTIKKMEILILSTLGWKMNPATPLSFIDFIIR 198