Miyakogusa Predicted Gene

Lj1g3v0841420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0841420.1 tr|C6L811|C6L811_CUCSA Delta-aminolevulinic acid
dehydratase (Fragment) OS=Cucumis sativus
GN=CsALAD,89.66,0.0000002,Aldolase,NULL; no description,Aldolase-type
TIM barrel; ALAD,Porphobilinogen synthase,CUFF.26429.1
         (62 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088610.2 | delta-aminolevulinic acid dehydratase | HC | c...    74   3e-14
Medtr3g088610.1 | delta-aminolevulinic acid dehydratase | HC | c...    59   1e-09

>Medtr3g088610.2 | delta-aminolevulinic acid dehydratase | HC |
           chr3:40042661-40047812 | 20130731
          Length = 375

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/41 (82%), Positives = 36/41 (87%)

Query: 22  LQVKPALPYLDVIRLLRDNSPLPIAAYQVFLWPILAIGKNF 62
           L VKP LPYLD+IRLLRDNSPLPIAAYQV LWPILA+ K F
Sbjct: 331 LLVKPGLPYLDIIRLLRDNSPLPIAAYQVLLWPILAVVKIF 371


>Medtr3g088610.1 | delta-aminolevulinic acid dehydratase | HC |
           chr3:40042661-40047812 | 20130731
          Length = 413

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/29 (89%), Positives = 27/29 (93%)

Query: 22  LQVKPALPYLDVIRLLRDNSPLPIAAYQV 50
           L VKP LPYLD+IRLLRDNSPLPIAAYQV
Sbjct: 331 LLVKPGLPYLDIIRLLRDNSPLPIAAYQV 359