Miyakogusa Predicted Gene

Lj1g3v0841410.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0841410.1 tr|B7FJZ6|B7FJZ6_MEDTR Delta-aminolevulinic acid
dehydratase OS=Medicago truncatula PE=2
SV=1,88.06,0,ALAD,Porphobilinogen synthase; no
description,Aldolase-type TIM barrel;
D_ALA_DEHYDRATASE,Porphobili,CUFF.26428.1
         (399 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088610.1 | delta-aminolevulinic acid dehydratase | HC | c...   644   0.0  
Medtr3g088610.2 | delta-aminolevulinic acid dehydratase | HC | c...   551   e-157

>Medtr3g088610.1 | delta-aminolevulinic acid dehydratase | HC |
           chr3:40042661-40047812 | 20130731
          Length = 413

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/403 (79%), Positives = 335/403 (83%), Gaps = 5/403 (1%)

Query: 2   ASTISNAPCTLNTQTYVALRPPHGTPNFAS-----PRPPRLFAVRASDSDCEXXXXXXXX 56
           +STI N P TLN+ TYV L+P     N+ S      RPP LF VRASD+D E        
Sbjct: 4   SSTIPNTPLTLNSHTYVDLKPALPLKNYLSFSSSKRRPPCLFTVRASDADFEAAVVAGNV 63

Query: 57  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRSAFQETTISPGHFVYPLFIHEG 116
                                                RSAFQETT+SP +FVYPLFIHEG
Sbjct: 64  PDAPPVPPTPAAPAGTPVVTSLPIQRRPRRNRRSATHRSAFQETTLSPANFVYPLFIHEG 123

Query: 117 EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKIPDALKTPTGDEAYSENGL 176
           EEDTPIGAMPGCYRLGWRHGL++EVAKARDVGVNSVVLFPKIPDALKTPTGDEAY+ENGL
Sbjct: 124 EEDTPIGAMPGCYRLGWRHGLIEEVAKARDVGVNSVVLFPKIPDALKTPTGDEAYNENGL 183

Query: 177 VPRAIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARA 236
           VPR IRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARA
Sbjct: 184 VPRTIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARA 243

Query: 237 GADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDK 296
           GADVVSPSDMMDGRVGA+RAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDK
Sbjct: 244 GADVVSPSDMMDGRVGAMRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDK 303

Query: 297 KTYQMNPANYREALTEMREDESEGADILLVKPALPYLDVIRLLRDNSPLPIAAYQVSGEY 356
           KTYQMNPANYREALTEMREDE+EGADILLVKP LPYLD+IRLLRDNSPLPIAAYQVSGEY
Sbjct: 304 KTYQMNPANYREALTEMREDETEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEY 363

Query: 357 SMIKAGGALKMIDEEKVMMESLLCLRRAGADVILTYFALQAAR 399
           SMIKAGGALKMIDEEKVMMESLLCLRRAGAD+ILTYFALQAAR
Sbjct: 364 SMIKAGGALKMIDEEKVMMESLLCLRRAGADIILTYFALQAAR 406


>Medtr3g088610.2 | delta-aminolevulinic acid dehydratase | HC |
           chr3:40042661-40047812 | 20130731
          Length = 375

 Score =  551 bits (1419), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 275/356 (77%), Positives = 288/356 (80%), Gaps = 5/356 (1%)

Query: 2   ASTISNAPCTLNTQTYVALRPPHGTPNFAS-----PRPPRLFAVRASDSDCEXXXXXXXX 56
           +STI N P TLN+ TYV L+P     N+ S      RPP LF VRASD+D E        
Sbjct: 4   SSTIPNTPLTLNSHTYVDLKPALPLKNYLSFSSSKRRPPCLFTVRASDADFEAAVVAGNV 63

Query: 57  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRSAFQETTISPGHFVYPLFIHEG 116
                                                RSAFQETT+SP +FVYPLFIHEG
Sbjct: 64  PDAPPVPPTPAAPAGTPVVTSLPIQRRPRRNRRSATHRSAFQETTLSPANFVYPLFIHEG 123

Query: 117 EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKIPDALKTPTGDEAYSENGL 176
           EEDTPIGAMPGCYRLGWRHGL++EVAKARDVGVNSVVLFPKIPDALKTPTGDEAY+ENGL
Sbjct: 124 EEDTPIGAMPGCYRLGWRHGLIEEVAKARDVGVNSVVLFPKIPDALKTPTGDEAYNENGL 183

Query: 177 VPRAIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARA 236
           VPR IRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARA
Sbjct: 184 VPRTIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARA 243

Query: 237 GADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDK 296
           GADVVSPSDMMDGRVGA+RAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDK
Sbjct: 244 GADVVSPSDMMDGRVGAMRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDK 303

Query: 297 KTYQMNPANYREALTEMREDESEGADILLVKPALPYLDVIRLLRDNSPLPIAAYQV 352
           KTYQMNPANYREALTEMREDE+EGADILLVKP LPYLD+IRLLRDNSPLPIAAYQV
Sbjct: 304 KTYQMNPANYREALTEMREDETEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQV 359