Miyakogusa Predicted Gene

Lj1g3v0809690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0809690.1 tr|A9V3A3|A9V3A3_MONBE Predicted protein
OS=Monosiga brevicollis GN=33060 PE=4
SV=1,35.5,4e-18,Rhomboid-like,NULL; RHOMBOID-RELATED,Peptidase S54,
rhomboid; no description,NULL;
Rhomboid,Peptidas,NODE_57099_length_1056_cov_47.316288.path1.1
         (197 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g109700.1 | S54 family peptidase | HC | chr4:45616780-4561...   305   1e-83

>Medtr4g109700.1 | S54 family peptidase | HC |
           chr4:45616780-45611349 | 20130731
          Length = 325

 Score =  305 bits (782), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 147/197 (74%), Positives = 173/197 (87%)

Query: 1   MVFGLIIANTAIFLLWRIADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHIISNM 60
           +V GL++AN A+FL W+IA + FM+NNFTISLDNIK+GRLHTLITNAFSHVDAWH++SNM
Sbjct: 129 LVLGLVVANVAVFLFWKIATQDFMLNNFTISLDNIKNGRLHTLITNAFSHVDAWHLMSNM 188

Query: 61  LGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQSSKGWRFSNHSKELALG 120
           LGLYFFG+++ S FGP FLLKLYLAGA+GGSVFYL HQ+YK+ +SKG+     SK+LALG
Sbjct: 189 LGLYFFGSSIASKFGPEFLLKLYLAGAIGGSVFYLGHQSYKSLTSKGYGAIKASKDLALG 248

Query: 121 ASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEGDTSISGSAHLG 180
           ASGAVNAVMLL IFL P+ATIY D FIPVPA LLG+F+IGKDMLRI+EGD++ISGSAHLG
Sbjct: 249 ASGAVNAVMLLDIFLNPRATIYLDFFIPVPAALLGIFLIGKDMLRIIEGDSTISGSAHLG 308

Query: 181 GATVGAIAWALVRKGRF 197
           G  V AIAW+ VRKGRF
Sbjct: 309 GMAVAAIAWSRVRKGRF 325