Miyakogusa Predicted Gene

Lj1g3v0796420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0796420.1 Non Characterized Hit- tr|B1XM46|B1XM46_SYNP2
Putative uncharacterized protein OS=Synechococcus sp.
,45.65,2e-16,DUF836,Glutaredoxin-like; seg,NULL; no
description,Thioredoxin-like fold;
Thioredoxin-like,Thioredox,CUFF.26350.1
         (139 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g072590.3 | glutaredoxin 2 | HC | chr3:32662344-32660166 |...   166   6e-42
Medtr3g072590.2 | glutaredoxin 2 | HC | chr3:32662344-32654073 |...   166   6e-42
Medtr3g072590.1 | glutaredoxin 2 | HC | chr3:32662344-32660930 |...   166   6e-42

>Medtr3g072590.3 | glutaredoxin 2 | HC | chr3:32662344-32660166 |
           20130731
          Length = 140

 Score =  166 bits (420), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 82/95 (86%), Positives = 85/95 (89%)

Query: 45  RKLILYSKPGCCLCDGLKEKLHAAFLLSGPDSLTDVHLQVRDITSNPEWESAYQYEIPVL 104
           RKLILYSKPGCCLCDGLKEKL  AF LSGP SL DV LQ+RDITSNPEWE AYQYEIPVL
Sbjct: 46  RKLILYSKPGCCLCDGLKEKLQDAFSLSGPHSLNDVDLQIRDITSNPEWEKAYQYEIPVL 105

Query: 105 AKVLSDGTEKTLPRLSPRLGVLHVQKKIAAALREQ 139
           AKVLSDGTE+TLPRLSPRLGV  +QKKIAAAL EQ
Sbjct: 106 AKVLSDGTEETLPRLSPRLGVELLQKKIAAALGEQ 140


>Medtr3g072590.2 | glutaredoxin 2 | HC | chr3:32662344-32654073 |
           20130731
          Length = 140

 Score =  166 bits (420), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 82/95 (86%), Positives = 85/95 (89%)

Query: 45  RKLILYSKPGCCLCDGLKEKLHAAFLLSGPDSLTDVHLQVRDITSNPEWESAYQYEIPVL 104
           RKLILYSKPGCCLCDGLKEKL  AF LSGP SL DV LQ+RDITSNPEWE AYQYEIPVL
Sbjct: 46  RKLILYSKPGCCLCDGLKEKLQDAFSLSGPHSLNDVDLQIRDITSNPEWEKAYQYEIPVL 105

Query: 105 AKVLSDGTEKTLPRLSPRLGVLHVQKKIAAALREQ 139
           AKVLSDGTE+TLPRLSPRLGV  +QKKIAAAL EQ
Sbjct: 106 AKVLSDGTEETLPRLSPRLGVELLQKKIAAALGEQ 140


>Medtr3g072590.1 | glutaredoxin 2 | HC | chr3:32662344-32660930 |
           20130731
          Length = 140

 Score =  166 bits (420), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 82/95 (86%), Positives = 85/95 (89%)

Query: 45  RKLILYSKPGCCLCDGLKEKLHAAFLLSGPDSLTDVHLQVRDITSNPEWESAYQYEIPVL 104
           RKLILYSKPGCCLCDGLKEKL  AF LSGP SL DV LQ+RDITSNPEWE AYQYEIPVL
Sbjct: 46  RKLILYSKPGCCLCDGLKEKLQDAFSLSGPHSLNDVDLQIRDITSNPEWEKAYQYEIPVL 105

Query: 105 AKVLSDGTEKTLPRLSPRLGVLHVQKKIAAALREQ 139
           AKVLSDGTE+TLPRLSPRLGV  +QKKIAAAL EQ
Sbjct: 106 AKVLSDGTEETLPRLSPRLGVELLQKKIAAALGEQ 140