Miyakogusa Predicted Gene

Lj1g3v0786310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0786310.1 Non Characterized Hit- tr|I3S6J5|I3S6J5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,95.12,0.00000000000006,no description,YbaK/aminoacyl-tRNA
synthetase-associated domain; YbaK/ProRS associated
domain,YbaK/a,NODE_92560_length_75_cov_124.626663.path2.1
         (41 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g072620.1 | YbaK/proline-tRNA ligase associated domain pro...    82   1e-16

>Medtr3g072620.1 | YbaK/proline-tRNA ligase associated domain
           protein | HC | chr3:32674759-32678924 | 20130731
          Length = 329

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/41 (95%), Positives = 40/41 (97%)

Query: 1   MAPEEALGEILQVPLGSVTPFAVVNESARDVSLLLDQGFKT 41
           MAPEEALGE+LQVPLG VTPFAVVNESARDVSLLLDQGFKT
Sbjct: 84  MAPEEALGELLQVPLGCVTPFAVVNESARDVSLLLDQGFKT 124