Miyakogusa Predicted Gene

Lj1g3v0749130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0749130.1 Non Characterized Hit- tr|C5WNT3|C5WNT3_SORBI
Putative uncharacterized protein Sb01g010880 OS=Sorghu,29.87,0.021,
,CUFF.26256.1
         (217 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g073330.1 | hypothetical protein | HC | chr3:33068016-3306...   193   9e-50
Medtr5g060450.1 | hypothetical protein | HC | chr5:25036457-2503...   115   5e-26

>Medtr3g073330.1 | hypothetical protein | HC |
           chr3:33068016-33066850 | 20130731
          Length = 214

 Score =  193 bits (491), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 127/232 (54%), Positives = 156/232 (67%), Gaps = 33/232 (14%)

Query: 1   MGN---ENHHHNPHLQFYH--QKTMFLPILCSRPSIKDVNLPRCRGLQNSSFDDPLSPRI 55
           MGN   ENHH     QFY+   K  FLP+LCSRPSIKDVNLPRCR   +SS +DPLSP+I
Sbjct: 1   MGNQKFENHH-----QFYNNRHKNTFLPMLCSRPSIKDVNLPRCRINPSSSCNDPLSPKI 55

Query: 56  GCMGQVKRNNKIAGVPTSSHSHRLTLTATKSTT-----PVVKYSKLKKLFSGKNLIISTP 110
           GCMGQVKRNNKIAG PTS   ++L     KS T     PVVKYSKLKKLFS KNLI +  
Sbjct: 56  GCMGQVKRNNKIAGFPTS--QYKLLSFNNKSNTPSIISPVVKYSKLKKLFSSKNLISTPS 113

Query: 111 KTTTAVPNSNINRCRTRQQQLAAGNNSAGVPKH-KRCDQNQNQNLVGISIEEMDPPLPVI 169
            T+T          +T+Q+ +    N   VPK+ +RC +N+N  +VGI I+EMDPPLPVI
Sbjct: 114 TTSTTT--------KTKQRVVGNSTNIVKVPKNIERCIRNENV-VVGIKIDEMDPPLPVI 164

Query: 170 KKVPNLEEGSKVENSLWKRRNNG--PAIKGLQLQQI--HHPRICLQLDPTTV 217
           K+V  LEEG+K ENSLWKRR+      ++ LQ+QQI    P++C  ++PTTV
Sbjct: 165 KRVNKLEEGNKSENSLWKRRSGSSLAPLRSLQVQQIQVQTPKLC--IEPTTV 214


>Medtr5g060450.1 | hypothetical protein | HC |
           chr5:25036457-25035296 | 20130731
          Length = 176

 Score =  115 bits (287), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 118/209 (56%), Gaps = 42/209 (20%)

Query: 1   MGNEN--HHHNPHLQFYHQKTMFLPILCSRPSIKDVNLPRCRGLQNSSFDDPLSPRIGCM 58
           MG EN  + HN +L   +Q+  FLP+LCSR SIKDV LP+C+    S  +DPLSPRIGCM
Sbjct: 1   MGRENLDYFHNQNLHI-NQRNTFLPMLCSR-SIKDVCLPQCKDNLRSFSNDPLSPRIGCM 58

Query: 59  GQVKRNNKIAGVPTSSHSHRLTLTATKSTTPVVKYSKLKKLFSGKNLIISTPKTTTAVPN 118
           GQVK+NNKI+G P+   SHR++     + T                   + P T  + P 
Sbjct: 59  GQVKKNNKISGFPS---SHRISFITKTTVTATA----------------AAPSTCGSRPR 99

Query: 119 SNINRCRTRQQQLAAGNNSAGVPKHKRCDQ--NQNQNLVGISIEEMDPPLPVIKKVPNLE 176
            ++N               +G    K C+Q  ++N+N+V ISIE MDPPLPVIK+V  LE
Sbjct: 100 VSVN---------------SGEVSRKYCNQKGHRNENIVPISIENMDPPLPVIKRVMKLE 144

Query: 177 EGSKVENSLWKRRNNGPAIKGLQLQQIHH 205
           + ++V+ SLWKRR +G    G+ ++   H
Sbjct: 145 DENQVD-SLWKRR-SGEICFGICVESDVH 171