Miyakogusa Predicted Gene

Lj1g3v0726960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0726960.1 Non Characterized Hit- tr|G7JI19|G7JI19_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,75.61,0.0000000005, ,CUFF.26228.1
         (99 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g131890.1 | hypothetical protein | LC | chr4:55048363-5505...    69   1e-12

>Medtr4g131890.1 | hypothetical protein | LC |
          chr4:55048363-55052561 | 20130731
          Length = 108

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/41 (75%), Positives = 33/41 (80%)

Query: 21 KGKKIEPDVNRTRNLLIWSQTRYHCATDPVEVKGAITYIYS 61
          K   IEPDVNRTRNLLIWSQTRYHCATDPV +    TYIY+
Sbjct: 10 KKDGIEPDVNRTRNLLIWSQTRYHCATDPVVIHFGHTYIYN 50