Miyakogusa Predicted Gene

Lj1g3v0683890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0683890.1 CUFF.26168.1
         (276 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g105100.1 | alpha/beta fold hydrolase | HC | chr7:42617300...   402   e-112

>Medtr7g105100.1 | alpha/beta fold hydrolase | HC |
           chr7:42617300-42613546 | 20130731
          Length = 340

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/293 (68%), Positives = 221/293 (75%), Gaps = 19/293 (6%)

Query: 1   MAAALRNRSNSHLHHLTRFLNSP---SRRWLQTVAYEELRAHPDKPYTSTAFIIHGFLGS 57
           MAA LRNR+NS L  LTRFLNSP     RW++T+AYEE RA PDKPYTSTA IIHGFLGS
Sbjct: 1   MAAYLRNRNNSLL--LTRFLNSPIHLRSRWIETIAYEESRAQPDKPYTSTAVIIHGFLGS 58

Query: 58  ARNWRSFX--------------XXXXXXXXXXXXXXXWRMVMLDMRNHGQSAERKLNPPH 103
           +RNWRSF                              WR V +DMRNHG+S E+KL+PPH
Sbjct: 59  SRNWRSFSRNLLASLSNSSPSSSYELSFLYVNSELKYWRTVCMDMRNHGKSTEQKLDPPH 118

Query: 104 XXXXXXXXXXXXVKTEGWSWPEVVIGHSMGGKVALQFAQSCSRGDYGDSAVLPKQLWVLD 163
                       VK EGWSWPEVVIGHSMGGKVALQFA SC   DYGDS   PKQLWVLD
Sbjct: 119 DLVNAAKDLANLVKAEGWSWPEVVIGHSMGGKVALQFAHSCKNSDYGDSVQCPKQLWVLD 178

Query: 164 SVPGEVNSENSNEEIRDILATLQSLPSQIPSRKWLVSHLMGLGYSKALSDWIGTNLKKVG 223
           SVPGEVN  N ++E+RD+L TL+SLPSQIPSRKWLVSHLMGLGYSK L+DWIGTNLKKVG
Sbjct: 179 SVPGEVNIGNKSDEVRDVLMTLESLPSQIPSRKWLVSHLMGLGYSKTLADWIGTNLKKVG 238

Query: 224 DHETWIFDLQNAKEMFDSFCKKSYWNLLENPPKGMEIVIVRAEKSDRWDQEAI 276
           DHETWIFDLQ+AKEMF+S+  KSYWNLLENPP+GMEIVIVRAEKSDRWDQEAI
Sbjct: 239 DHETWIFDLQSAKEMFNSYWDKSYWNLLENPPQGMEIVIVRAEKSDRWDQEAI 291