Miyakogusa Predicted Gene

Lj1g3v0682850.5
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0682850.5 Non Characterized Hit- tr|J3LBR2|J3LBR2_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=CPS1 P,49,5e-19,no
description,Terpenoid synthase; seg,NULL; Terpene_synth_C,Terpene
synthase, metal-binding domain;,CUFF.26241.5
         (225 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g011770.1 | copalyldiphosphate synthase | HC | chr7:322484...   276   2e-74
Medtr7g011663.1 | copalyldiphosphate synthase | HC | chr7:318638...   275   2e-74
Medtr7g094970.1 | copalyldiphosphate synthase | HC | chr7:379576...   157   6e-39
Medtr5g030050.1 | copalyldiphosphate synthase | HC | chr5:126359...   104   6e-23
Medtr0042s0040.1 | Ent-copalyl diphosphate synthase-like protein...    71   8e-13
Medtr3g034810.1 | Ent-copalyl diphosphate synthase-like protein ...    70   1e-12
Medtr0534s0030.1 | terpene synthase family, metal-binding domain...    59   5e-09
Medtr2g067110.1 | Ent-copalyl diphosphate synthase-like protein ...    57   1e-08
Medtr8g073530.1 | amine-terminal domain terpene synthase | LC | ...    53   2e-07
Medtr1g050430.1 | terpene synthase family, metal-binding domain ...    53   2e-07

>Medtr7g011770.1 | copalyldiphosphate synthase | HC |
           chr7:3224841-3236744 | 20130731
          Length = 717

 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 135/216 (62%), Positives = 159/216 (73%), Gaps = 4/216 (1%)

Query: 1   MAYVNNNNYLELAKLDYNSCQALHQTEWGEIQKWYXXXXXXXXXXXXXXXXXXXXXXXXX 60
           M  V+NNNYLELAKLDYN+CQ  H  EW  IQKWY                         
Sbjct: 424 MLNVSNNNYLELAKLDYNNCQTQHLKEWSMIQKWYSESRLGEFGLSKRELLLAYFLAAAN 483

Query: 61  IFEPERYHVRLAWAKTTSLLETIASYATDAEMRKDFMERFTDCINKRDYSIGRRLNRSKT 120
           IFEPER H RLAWAKTT+LLETI SY +DA+++KDF+++F+D IN++DYSIGRRLN++KT
Sbjct: 484 IFEPERSHERLAWAKTTALLETITSYVSDADLKKDFVKKFSDYINRQDYSIGRRLNKNKT 543

Query: 121 GHGLAETLVATIDQISWGILVSHGHEIGTDMHHSWKKWLSSWQSGG----GDAELLVQTI 176
           G  L ETLVATIDQIS  I VS+GHEIG DMH  WKKWLSSWQS G    G+AELLVQ I
Sbjct: 544 GDELVETLVATIDQISGDIFVSYGHEIGYDMHQCWKKWLSSWQSEGDKCEGEAELLVQII 603

Query: 177 NLSAGYWISEEQMLSPQYQRLLQLTNTLCHTLHCYQ 212
           NLSAG+ ISE+Q+ +PQY+ LLQLTN++CH LHCYQ
Sbjct: 604 NLSAGHLISEDQICNPQYKHLLQLTNSICHKLHCYQ 639


>Medtr7g011663.1 | copalyldiphosphate synthase | HC |
           chr7:3186380-3175131 | 20130731
          Length = 822

 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 135/216 (62%), Positives = 158/216 (73%), Gaps = 4/216 (1%)

Query: 1   MAYVNNNNYLELAKLDYNSCQALHQTEWGEIQKWYXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA VNNNNYLELAKLDYN+CQA H  EW  IQKWY                         
Sbjct: 528 MANVNNNNYLELAKLDYNNCQAQHLKEWSMIQKWYSECRLGEFGLSKRDLLMSYFLAAAS 587

Query: 61  IFEPERYHVRLAWAKTTSLLETIASYATDAEMRKDFMERFTDCINKRDYSIGRRLNRSKT 120
           IF+PER   RLAWAKTT+LL+T  SY  D +++KDF+ ++ D IN+RD+SIG RLNR+KT
Sbjct: 588 IFQPERSQERLAWAKTTALLQTFTSYIRDEDLKKDFVNKYNDYINRRDHSIGWRLNRNKT 647

Query: 121 GHGLAETLVATIDQISWGILVSHGHEIGTDMHHSWKKWLSSWQSGG----GDAELLVQTI 176
           GH LAETLVATIDQISW ILVS+GHEIG DMH  WKKWLSSWQ+ G    G+AELLVQ I
Sbjct: 648 GHDLAETLVATIDQISWDILVSYGHEIGYDMHQCWKKWLSSWQNEGDKCEGEAELLVQII 707

Query: 177 NLSAGYWISEEQMLSPQYQRLLQLTNTLCHTLHCYQ 212
           NLSAG+ ISE+Q+ +PQY+ LLQLTN++CH LHCYQ
Sbjct: 708 NLSAGHLISEDQIFNPQYKHLLQLTNSICHKLHCYQ 743


>Medtr7g094970.1 | copalyldiphosphate synthase | HC |
           chr7:37957667-37961895 | 20130731
          Length = 674

 Score =  157 bits (398), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 89/216 (41%), Positives = 126/216 (58%), Gaps = 6/216 (2%)

Query: 1   MAYVNNNNYLELAKLDYNSCQALHQTEWGEIQKWYXXXXXXXXXXXXXXXXXXXXXXXXX 60
           M YVNN+ YLELA+LDYN+CQA+H  EW EI +WY                         
Sbjct: 390 MPYVNNDVYLELARLDYNNCQAMHYDEWKEIHRWYMESEQEGFGLSKKSLLIAYYVAAAN 449

Query: 61  IFEPERYHVRLAWAKTTSLLETIASYATDAEMRKDFMERFTDCINKRDYSIGRRLNRSKT 120
           IFEPER   RLAWAKTT+LL+ + S   D E R  F+++F  CIN+ +YS  + ++++K 
Sbjct: 450 IFEPERSLERLAWAKTTALLQILESNFEDEETRTAFVDQFNKCINEENYS-KKVIDKNKR 508

Query: 121 GHGLAETLVATIDQISWGILVSHGHEIGTDMHHSWKKWLSSWQSGGG----DAELLVQTI 176
              L   L+ T+D +   +  +   E    +   W++W SSW + G     +A+LLVQ I
Sbjct: 509 EEKLMGILLTTLDDLDLQMFRNQNQENSHYLKQMWQRWFSSWVNEGNKSKREAKLLVQII 568

Query: 177 NLSAGYWISEEQMLSPQYQRLLQLTNTLCHTLHCYQ 212
           NL+AGYW S+E  L+P+YQ+LL++TN +C  L  YQ
Sbjct: 569 NLTAGYW-SKEVQLNPEYQKLLEVTNGICTGLRNYQ 603


>Medtr5g030050.1 | copalyldiphosphate synthase | HC |
           chr5:12635971-12633856 | 20130731
          Length = 313

 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 76/134 (56%), Gaps = 2/134 (1%)

Query: 1   MAYVNNNNYLELAKLDYNSCQALHQTEWGE-IQKWYXXXXXXXXXXXXXXXXXXXXXXXX 59
           M Y+NN+ YLELAKLDYN+CQA+H  EW E IQ+WY                        
Sbjct: 170 MPYMNNDIYLELAKLDYNNCQAMHYNEWEEEIQRWYMESELEGFGLSKKSLLIAYYVAAA 229

Query: 60  XIFEPERYHVRLAWAKTTSLLETIASYATDAEMRKDFMERFTDCINKRDYSIGRRLNRSK 119
            IFEPER   RLAWAKTT+LL+ + S   D E +  F+++F  CIN   YSI + L+++K
Sbjct: 230 SIFEPERSLERLAWAKTTALLQILESNFKDDETKSAFVDQFNKCINGGVYSI-KGLDKNK 288

Query: 120 TGHGLAETLVATID 133
               L   L+ T+D
Sbjct: 289 REEKLMGILLTTLD 302


>Medtr0042s0040.1 | Ent-copalyl diphosphate synthase-like protein |
           HC | scaffold0042:13144-11175 | 20130731
          Length = 179

 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 48/94 (51%), Gaps = 26/94 (27%)

Query: 1   MAYVNNNNYLELAKLDYNSCQALHQTEWGEIQKWYXXXXXXXXXXXXXXXXXXXXXXXXX 60
           M Y+ N+ YLELAKLDYN+CQA+H  EW E                              
Sbjct: 110 MPYMTNDVYLELAKLDYNNCQAMHYDEWKE--------------------------EIQS 143

Query: 61  IFEPERYHVRLAWAKTTSLLETIASYATDAEMRK 94
           IFEPER   RLAWAKTT+LL+ + S   D E RK
Sbjct: 144 IFEPERSLERLAWAKTTALLQILESNFKDEETRK 177


>Medtr3g034810.1 | Ent-copalyl diphosphate synthase-like protein |
           HC | chr3:11911132-11911730 | 20130731
          Length = 105

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 48/94 (51%), Gaps = 12/94 (12%)

Query: 1   MAYVNNNNYLELAKLDYNSCQALHQTEWGEIQKWYXXXXXXXXXXXXXXXXXXXXXXXXX 60
           M Y+ N+ YLELAKLDYN+CQA+H  EW E                              
Sbjct: 22  MPYMANDVYLELAKLDYNNCQAMHYDEWKE------------EIQSKESMLLAYHVAATS 69

Query: 61  IFEPERYHVRLAWAKTTSLLETIASYATDAEMRK 94
           IFEPER   RLAWAKTT+LL+ + S   D E RK
Sbjct: 70  IFEPERSLERLAWAKTTTLLQILESNFKDKETRK 103


>Medtr0534s0030.1 | terpene synthase family, metal-binding domain
           protein | HC | scaffold0534:9004-9308 | 20130731
          Length = 101

 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 61  IFEPERYHVRLAWAKTTSLLETIASYATDAEMRKDFMERFTDCINKRDYS 110
           IFEPER   RLAWAKTT+LL+ + S   D E R  F+++F  CIN  +YS
Sbjct: 51  IFEPERSLERLAWAKTTALLQIMESIFKDEETRNAFVDQFNKCINGGNYS 100


>Medtr2g067110.1 | Ent-copalyl diphosphate synthase-like protein |
           HC | chr2:28049866-28050057 | 20130731
          Length = 63

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 61  IFEPERYHVRLAWAKTTSLLETIASYATDAEMRKDFMERFTDCINKRDYS 110
           IFEPER   RLAWAKTT+LL+ + S   D E R  F+++F  CIN  +YS
Sbjct: 12  IFEPERSLERLAWAKTTALLQILESNFKDEETRNAFVDQFNKCINGGNYS 61


>Medtr8g073530.1 | amine-terminal domain terpene synthase | LC |
           chr8:31153406-31150992 | 20130731
          Length = 281

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 26/32 (81%)

Query: 1   MAYVNNNNYLELAKLDYNSCQALHQTEWGEIQ 32
           M YVNN+ YLELAKLDYN CQA+H  EW EIQ
Sbjct: 149 MPYVNNDVYLELAKLDYNYCQAMHYDEWEEIQ 180


>Medtr1g050430.1 | terpene synthase family, metal-binding domain
           protein | LC | chr1:19850656-19852042 | 20130731
          Length = 158

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 33/50 (66%)

Query: 61  IFEPERYHVRLAWAKTTSLLETIASYATDAEMRKDFMERFTDCINKRDYS 110
           IFEPER   R+A AKTT+LL+ + S   D E R  F+++F  CIN  +Y+
Sbjct: 84  IFEPERSLERIACAKTTALLQILESNLKDEETRNAFVDQFNKCINGGNYT 133