Miyakogusa Predicted Gene

Lj1g3v0652040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0652040.1 tr|B9GUI6|B9GUI6_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_710171
PE=4,79.57,0,AMINOTRANSFERASE RELATED,Diaminopimelate
aminotransferase, DapL, plant/Chlamydia-type; SUBGROUP I
AM,CUFF.26117.1
         (186 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g008430.1 | LL-diaminopimelate aminotransferase | HC | chr...   310   6e-85
Medtr4g092620.1 | LL-diaminopimelate aminotransferase | HC | chr...   293   5e-80
Medtr3g072670.1 | aspartate aminotransferase family protein | HC...    59   2e-09
Medtr4g011820.1 | aspartate aminotransferase | HC | chr4:2998684...    59   3e-09
Medtr3g072680.1 | aspartate aminotransferase family protein | HC...    58   4e-09
Medtr7g106830.1 | aspartate aminotransferase | HC | chr7:4351617...    57   1e-08
Medtr8g091280.1 | aspartate aminotransferase | HC | chr8:3810686...    55   3e-08
Medtr1g087760.1 | kynurenine-oxoglutarate transaminase-like prot...    50   1e-06

>Medtr2g008430.1 | LL-diaminopimelate aminotransferase | HC |
           chr2:1471885-1475400 | 20130731
          Length = 440

 Score =  310 bits (793), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 141/186 (75%), Positives = 164/186 (88%)

Query: 1   MKCGPENNFFPDLSTTPRVDVIFFCSPNNPTGSAASRQQLKQLVEFAKANGSMIIYDSAY 60
           M CGP+ +FFPDL TT R  +IFFCSPNNPTG AA+R+QL+QLV+FAK NGS+IIYDSAY
Sbjct: 195 MTCGPQTDFFPDLHTTSRAQLIFFCSPNNPTGHAATRKQLQQLVDFAKVNGSIIIYDSAY 254

Query: 61  SAYISDESPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYANGYSVLKDY 120
           SAYI+D SP+SIYEIPGAREVAIE+SSFSKFAGFTGVRLGWTVVPEEL Y+NG+ VL D+
Sbjct: 255 SAYITDGSPKSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWTVVPEELLYSNGFPVLHDF 314

Query: 121 DRIVCTSFNGASNIVQAGGLACLSPEGFKALKSTINHYMENAKILVDTFESLGLKVYGGR 180
           +RIVCT FNGASNI QAGGLACLSPEG  A++S +++YMENA+ILV    SLGL VYGG+
Sbjct: 315 NRIVCTCFNGASNISQAGGLACLSPEGLNAVQSLVDYYMENARILVTALTSLGLTVYGGK 374

Query: 181 NAPYIW 186
           NAPY+W
Sbjct: 375 NAPYVW 380


>Medtr4g092620.1 | LL-diaminopimelate aminotransferase | HC |
           chr4:36730817-36736760 | 20130731
          Length = 459

 Score =  293 bits (751), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 131/186 (70%), Positives = 162/186 (87%)

Query: 1   MKCGPENNFFPDLSTTPRVDVIFFCSPNNPTGSAASRQQLKQLVEFAKANGSMIIYDSAY 60
           M+C PEN FFPDLS+  R D+IFFCSPNNPTG+AA+R+QL QLV+FAK NGS+I+YDSAY
Sbjct: 214 MRCNPENGFFPDLSSLSRPDIIFFCSPNNPTGAAATREQLVQLVQFAKDNGSIIVYDSAY 273

Query: 61  SAYISDESPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYANGYSVLKDY 120
           + YIS ++PRSI+EIPGA+EVAIE SSFSK+AGFTGVRLGWTV+P++L +++G+ V KD+
Sbjct: 274 AMYISGDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKQLLFSDGFPVAKDF 333

Query: 121 DRIVCTSFNGASNIVQAGGLACLSPEGFKALKSTINHYMENAKILVDTFESLGLKVYGGR 180
           +RIVCT FNGASNI QAGGLACLSPEG KA++  I  Y EN  I+VDTF+SLG KVYGG+
Sbjct: 334 NRIVCTCFNGASNISQAGGLACLSPEGLKAMRGVIGFYKENTNIIVDTFDSLGFKVYGGK 393

Query: 181 NAPYIW 186
           +APY+W
Sbjct: 394 SAPYVW 399


>Medtr3g072670.1 | aspartate aminotransferase family protein | HC |
           chr3:32712273-32709423 | 20130731
          Length = 445

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 15/159 (9%)

Query: 22  IFFCSPNNPTGSAASRQQLKQLVEFAKANGSMIIYDSAYSAYISDESPRSIYEIPGAREV 81
           I   +P+NPTG   + ++L  +      N  ++  D  Y     D    SI  +PG  E 
Sbjct: 223 ILLNTPHNPTGKMFTPEELNTIASLCIENDVLVFSDEVYDKLAFDMEHISIASLPGMFER 282

Query: 82  AIEISSFSKFAGFTGVRLGWTVVPEELRYA--NGYSVLKDYDRIVCTSFNGASNIVQAGG 139
            + ++S  K    TG ++GW + P  L +     ++ L         +F  ++ +  A  
Sbjct: 283 TVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAFL---------TFATSNPMQWAAA 333

Query: 140 LACLSPEG-FKALKSTINHYMENAKILVDTFESLGLKVY 177
           +A  +P+  +  LK     YM    ILV+  +++G KV+
Sbjct: 334 VALRAPDSYYTELK---RDYMAKRSILVEGLKAVGFKVF 369


>Medtr4g011820.1 | aspartate aminotransferase | HC |
           chr4:2998684-2993522 | 20130731
          Length = 396

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 25/196 (12%)

Query: 4   GPEN--NFFPDLS--------TTPRVDVIFFCSPNNPTGSAASRQQLKQLVEFAKANGSM 53
           GP N    +PD          + P   ++   +P NPTG+      LK++    +  GS 
Sbjct: 141 GPGNPETLYPDADWLEKVLSESKPVPKLVTVVNPGNPTGTYIPESLLKRIANLCEKAGSW 200

Query: 54  IIYDSAYSAYISDESPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYANG 113
           ++ D+ Y  ++ D+   +  E        + I SFSK  G  G R+G+   P E+    G
Sbjct: 201 LVVDNTYEYFMFDDLKHTCVE----GNHVVNIFSFSKAYGMMGWRIGYIAYPSEVE-GLG 255

Query: 114 YSVLKDYDRI-VCTSFNGASNIVQAGGLACLSPE-GFKALKSTINHYMENAKILVDTFES 171
             +LK  D I +C S       + +  LA  S E G + +   +    +N +I+++   S
Sbjct: 256 SQLLKVQDNIPICAS-------IISQHLALYSLELGPEWVTERVKTLAKNRQIVMEALSS 308

Query: 172 LGL-KVYGGRNAPYIW 186
           LG   + GG  A Y+W
Sbjct: 309 LGEGSIKGGEGAIYLW 324


>Medtr3g072680.1 | aspartate aminotransferase family protein | HC |
           chr3:32717250-32713023 | 20130731
          Length = 402

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 21/162 (12%)

Query: 22  IFFCSPNNPTGSAASRQQLKQLVEFAKANGSMIIYDSAYSAYISDESPRSIYEIPGAREV 81
           I   +P+NPTG   +R++L  +      N  ++  D  Y     D    SI  +PG  E 
Sbjct: 180 ILINTPHNPTGKMFTREELDSVASLCIENDVLVFTDEVYHKLAFDMEHISIATLPGMFER 239

Query: 82  AIEISSFSKFAGFTGVRLGWTVVPEEL----RYANGYSVLKDYDRIVCTSFNGASNIVQA 137
            + ++S  K    TG ++GW + P  L    R A+ Y                 S+ +Q 
Sbjct: 240 TVTMNSLGKSFSLTGWKVGWAIAPPHLMWGVRQAHTYIAF------------SISHPLQC 287

Query: 138 GGLACL-SPEGFKA-LKSTINHYMENAKILVDTFESLGLKVY 177
           G  A L +P+ +   LK     Y+    ILV+  +++G KV+
Sbjct: 288 GAAAALRAPDSYYVELK---RDYIAKRAILVEGLKAVGFKVF 326


>Medtr7g106830.1 | aspartate aminotransferase | HC |
           chr7:43516177-43513083 | 20130731
          Length = 473

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 13/176 (7%)

Query: 16  TPRVDVIFFCSPNNPTGSAASRQQLKQLVEF-AKANGSMIIYDSAYSAYI-SDESPRSIY 73
           T R  V+  CSP+NPTGS   ++ L+++    AK    ++I D  Y   I +  +  S  
Sbjct: 228 TERSRVLILCSPSNPTGSVYPKKLLEEIAHIVAKHPRLLVISDEIYEHIIYAPATHTSFA 287

Query: 74  EIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYANGYSVLKDYDRIVCTSFNGASN 133
            +PG     + ++ FSK    TG RLG+   P+    A G        +I     +GAS+
Sbjct: 288 SLPGMWGKTLTVNGFSKPFAMTGWRLGYIAGPKHFISACG--------KIQSQFTSGASS 339

Query: 134 IVQAGGLACLSP--EGFKALKSTINHYMENAKILVDTFESL-GLKVYGGRNAPYIW 186
           I Q   +A L     G + + + +  + E    LV +F  + G+++   + A Y++
Sbjct: 340 ISQKAAVAALGLGYAGGEVVSTMVKAFRERRNYLVKSFREIDGVEISEPQGAFYLF 395


>Medtr8g091280.1 | aspartate aminotransferase | HC |
           chr8:38106868-38102584 | 20130731
          Length = 475

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 18/190 (9%)

Query: 7   NNFFPD-----LSTTPRVDVIFFCSPNNPTGSAASRQQLKQLVEF-AKANGSMIIYDSAY 60
           NNF  D        T +  ++  CSP+NPTGS   +  L+++ +  AK    ++I D  Y
Sbjct: 216 NNFLLDPKLLESKITEKSRLLILCSPSNPTGSVYPKYLLEEIAKIVAKHPRLLVISDEIY 275

Query: 61  SAYI-SDESPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYANGYSVLKD 119
              I +  +  S   +P      + ++ FSK    TG RLG+   P+    A G      
Sbjct: 276 EHIIYAPATHTSFASLPRMWNRTLTVNGFSKAFAMTGWRLGYIAGPKHFIAAVG------ 329

Query: 120 YDRIVCTSFNGASNIVQAGGLACLSP--EGFKALKSTINHYMENAKILVDTFESL-GLKV 176
             +I     +G S+I Q  G+A L     G +A+ + +  + E    LV +F  + G+K+
Sbjct: 330 --KIQSQFTSGPSSISQKAGVAALGLGYAGGEAVSTMVKAFRERRDYLVKSFSEIDGVKI 387

Query: 177 YGGRNAPYIW 186
              + A Y++
Sbjct: 388 SEPQGAFYLF 397


>Medtr1g087760.1 | kynurenine-oxoglutarate transaminase-like protein
           | HC | chr1:39273274-39269554 | 20130731
          Length = 403

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 14  STTPRVDVIFFCSPNNPTGSAASRQQLKQLVEFAKANGSMIIYDSAYSAYISDESPR-SI 72
           S T R   I   SP+NPTG   ++ +L+ +     +   + I D  Y     D     S+
Sbjct: 153 SITERTKAIILNSPHNPTGKVFTKDELETIAGACCSRNCLAITDEVYEHITYDNQKHISL 212

Query: 73  YEIPGAREVAIEISSFSKFAGFTGVRLGW 101
              PG +E  I  SS SK    TG R+GW
Sbjct: 213 ASFPGMQERTIITSSLSKTFSVTGWRIGW 241