Miyakogusa Predicted Gene
- Lj1g3v0546880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0546880.1 Non Characterized Hit- tr|I1KD08|I1KD08_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,60.56,0.00000000000007,no description,Zinc finger,
RING/FYVE/PHD-type; FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type;
seg,gene.g29788.t1.1
(402 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g025330.1 | RING/FYVE/PHD zinc finger protein, putative | ... 215 5e-56
Medtr0001s0570.5 | RING/FYVE/PHD zinc finger protein, putative |... 61 2e-09
Medtr0001s0570.3 | RING/FYVE/PHD zinc finger protein, putative |... 61 2e-09
Medtr5g007180.1 | RING/FYVE/PHD zinc finger protein, putative | ... 61 2e-09
Medtr5g007180.3 | RING/FYVE/PHD zinc finger protein, putative | ... 61 2e-09
Medtr5g007180.2 | RING/FYVE/PHD zinc finger protein, putative | ... 61 2e-09
Medtr0001s0570.2 | RING/FYVE/PHD zinc finger protein, putative |... 61 3e-09
Medtr0001s0570.4 | RING/FYVE/PHD zinc finger protein, putative |... 61 3e-09
Medtr0001s0570.6 | RING/FYVE/PHD zinc finger protein, putative |... 60 4e-09
Medtr0001s0570.1 | RING/FYVE/PHD zinc finger protein, putative |... 60 4e-09
>Medtr3g025330.1 | RING/FYVE/PHD zinc finger protein, putative | HC
| chr3:7740950-7733410 | 20130731
Length = 569
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 174/300 (58%), Gaps = 30/300 (10%)
Query: 13 VEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTDIPDDWCCETCQAKNGTTSPCKV 72
VEPC+ICG G+ EVIV CSKC V REH YCM+I L ++PD W CE CQ+ NG+TS C
Sbjct: 11 VEPCDICGHFGFGEVIVTCSKCKVNREHVYCMKINLMEVPDYWLCEPCQSNNGSTSQCIA 70
Query: 73 DQNFSPQAPKRQRDVKA---GKVKFLPEDEVIKLSSGNFPAKPIRGSSS----------- 118
Q+ QA KRQ+ + GKVK+L EDEVIKLSS N KP SSS
Sbjct: 71 KQDSGLQASKRQQSARTGPRGKVKYLQEDEVIKLSSCNVSIKPTPPSSSNLLMTRKVNPG 130
Query: 119 ---FNIARKAPVASKTVVSKIPSRT-----SPSPMVLGKLPISGAQRNQMTDKHASQSLS 170
++ R+ VASK++++KIPS T S SPM G P +G Q+N +T+ HAS SL
Sbjct: 131 RPALSMTRRGRVASKSLLTKIPSLTPKPNPSISPMAHGMFPRNGGQKNPITNLHASSSLG 190
Query: 171 --KGVIWMVGPIEGLVHMELYLVVAKGPTKERKHLSKLQVG-FIPDRKVKTLDLQIQKPT 227
+ + + ++ + KGP KE + S+ +VG IP+RKV+ DL+I+K T
Sbjct: 191 EKQNNLRLCFAAIPIIFEVILCDTVKGPLKEHRLASERRVGPPIPNRKVQYADLRIEKRT 250
Query: 228 KEAPCEDLSARKSLPIGCSGDIFGAVAEYDRSNIGKSDILSIQENFNLHYKSLPSLSPTW 287
+E+P DLSA KS+P+ S VAEY+ N+ KS I S ENF + K PS W
Sbjct: 251 RESPNNDLSATKSVPVAVSD-----VAEYNVLNMEKSKIQSFVENFPRYQKYFPSSIRAW 305
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Query: 288 RSIENLHSVFEFMNAEQSLLRTSIDGVELLVFTSSQLDKDSK-----VTEGYFLWGVFRH 342
RS +NL+++ +FMN E +LR+ I+GVEL +FTS +L DS+ V EGYFLWGVFR
Sbjct: 384 RSRKNLNNLLKFMNDENLMLRSLINGVELFLFTSHKLSDDSRGTIAVVHEGYFLWGVFRT 443
Query: 343 KKINEADERLLLKMEPXXXXXXXXXXGGKELVGMIDWV 380
KK A+ERL M+P GG + VG ID V
Sbjct: 444 KKSVTANERLPPDMDPIDDDMDIDMMGGND-VGRIDNV 480
>Medtr0001s0570.5 | RING/FYVE/PHD zinc finger protein, putative | HC
| scaffold0001:431394-437206 | 20130731
Length = 1231
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 13/72 (18%)
Query: 3 ILGITV------------IGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTD 50
+LGI+V + + V+ C+ICGD G ++ +CS+C+ EH YCMR L
Sbjct: 78 VLGISVPQPEDESDESDFVEHDVKVCDICGDSGRENLLAICSRCSDGAEHTYCMREMLEK 137
Query: 51 IPD-DWCCETCQ 61
+P+ DW CE CQ
Sbjct: 138 VPEGDWFCEECQ 149
>Medtr0001s0570.3 | RING/FYVE/PHD zinc finger protein, putative | HC
| scaffold0001:431394-437206 | 20130731
Length = 1231
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 13/72 (18%)
Query: 3 ILGITV------------IGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTD 50
+LGI+V + + V+ C+ICGD G ++ +CS+C+ EH YCMR L
Sbjct: 78 VLGISVPQPEDESDESDFVEHDVKVCDICGDSGRENLLAICSRCSDGAEHTYCMREMLEK 137
Query: 51 IPD-DWCCETCQ 61
+P+ DW CE CQ
Sbjct: 138 VPEGDWFCEECQ 149
>Medtr5g007180.1 | RING/FYVE/PHD zinc finger protein, putative | HC
| chr5:1231178-1237896 | 20130731
Length = 1457
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 8 VIGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTDIPD-DWCCETCQ 61
V+ + V+ C+ICGD G +++ +C +C EH YCMR L +P+ DW CE CQ
Sbjct: 224 VVEHDVKVCDICGDAGREDLLAICCRCTDGAEHTYCMREMLEKLPEGDWLCEECQ 278
>Medtr5g007180.3 | RING/FYVE/PHD zinc finger protein, putative | HC
| chr5:1231178-1237896 | 20130731
Length = 1457
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 8 VIGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTDIPD-DWCCETCQ 61
V+ + V+ C+ICGD G +++ +C +C EH YCMR L +P+ DW CE CQ
Sbjct: 224 VVEHDVKVCDICGDAGREDLLAICCRCTDGAEHTYCMREMLEKLPEGDWLCEECQ 278
>Medtr5g007180.2 | RING/FYVE/PHD zinc finger protein, putative | HC
| chr5:1231178-1237896 | 20130731
Length = 1464
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 8 VIGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTDIPD-DWCCETCQ 61
V+ + V+ C+ICGD G +++ +C +C EH YCMR L +P+ DW CE CQ
Sbjct: 224 VVEHDVKVCDICGDAGREDLLAICCRCTDGAEHTYCMREMLEKLPEGDWLCEECQ 278
>Medtr0001s0570.2 | RING/FYVE/PHD zinc finger protein, putative | HC
| scaffold0001:430905-437206 | 20130731
Length = 1394
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 13/72 (18%)
Query: 3 ILGITV------------IGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTD 50
+LGI+V + + V+ C+ICGD G ++ +CS+C+ EH YCMR L
Sbjct: 241 VLGISVPQPEDESDESDFVEHDVKVCDICGDSGRENLLAICSRCSDGAEHTYCMREMLEK 300
Query: 51 IPD-DWCCETCQ 61
+P+ DW CE CQ
Sbjct: 301 VPEGDWFCEECQ 312
>Medtr0001s0570.4 | RING/FYVE/PHD zinc finger protein, putative | HC
| scaffold0001:430905-437206 | 20130731
Length = 1394
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 13/72 (18%)
Query: 3 ILGITV------------IGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTD 50
+LGI+V + + V+ C+ICGD G ++ +CS+C+ EH YCMR L
Sbjct: 241 VLGISVPQPEDESDESDFVEHDVKVCDICGDSGRENLLAICSRCSDGAEHTYCMREMLEK 300
Query: 51 IPD-DWCCETCQ 61
+P+ DW CE CQ
Sbjct: 301 VPEGDWFCEECQ 312
>Medtr0001s0570.6 | RING/FYVE/PHD zinc finger protein, putative | HC
| scaffold0001:430833-437206 | 20130731
Length = 1418
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 13/72 (18%)
Query: 3 ILGITV------------IGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTD 50
+LGI+V + + V+ C+ICGD G ++ +CS+C+ EH YCMR L
Sbjct: 265 VLGISVPQPEDESDESDFVEHDVKVCDICGDSGRENLLAICSRCSDGAEHTYCMREMLEK 324
Query: 51 IPD-DWCCETCQ 61
+P+ DW CE CQ
Sbjct: 325 VPEGDWFCEECQ 336
>Medtr0001s0570.1 | RING/FYVE/PHD zinc finger protein, putative | HC
| scaffold0001:430833-437206 | 20130731
Length = 1418
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 13/72 (18%)
Query: 3 ILGITV------------IGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTD 50
+LGI+V + + V+ C+ICGD G ++ +CS+C+ EH YCMR L
Sbjct: 265 VLGISVPQPEDESDESDFVEHDVKVCDICGDSGRENLLAICSRCSDGAEHTYCMREMLEK 324
Query: 51 IPD-DWCCETCQ 61
+P+ DW CE CQ
Sbjct: 325 VPEGDWFCEECQ 336