Miyakogusa Predicted Gene

Lj1g3v0536740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0536740.1 tr|G7JGQ4|G7JGQ4_MEDTR Eukaryotic translation
initiation factor 5A-1 OS=Medicago truncatula
GN=MTR_4,42.97,8e-17,IF5A_HYPUSINE,Translation elongation factor,
IF5A, hypusine site; Translation proteins SH3-like doma,CUFF.26001.1
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g109130.1 | eukaryotic translation initiation factor 5A4 |...   310   4e-85
Medtr3g437680.1 | eukaryotic translation initiation factor 5A4 |...   309   8e-85
Medtr3g437680.2 | eukaryotic translation initiation factor 5A4 |...   309   8e-85
Medtr5g042990.1 | eukaryotic translation initiation factor 5A4 |...   304   2e-83
Medtr4g130917.1 | eukaryotic translation initiation factor 5A | ...   303   3e-83
Medtr5g042990.3 | eukaryotic translation initiation factor 5A4 |...   245   1e-65
Medtr5g042990.4 | eukaryotic translation initiation factor 5A4 |...   245   1e-65
Medtr5g042990.2 | eukaryotic translation initiation factor 5A4 |...   244   2e-65
Medtr4g130917.2 | eukaryotic translation initiation factor 5A | ...   243   5e-65
Medtr4g109130.2 | eukaryotic translation initiation factor 5A4 |...   210   4e-55
Medtr4g112440.1 | eukaryotic translation initiation factor 5A | ...   148   2e-36
Medtr4g130907.1 | eukaryotic translation initiation factor 5A | ...    90   1e-18

>Medtr4g109130.1 | eukaryotic translation initiation factor 5A4 | HC
           | chr4:45278237-45276043 | 20130731
          Length = 160

 Score =  310 bits (794), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 148/159 (93%), Positives = 156/159 (98%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDGF+SLLTENGNTKDDLKLPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 121 EALLSQIKDGFAEGKDLVLSVMSAMGEEQICALKDIGPK 159
           ++LL+QIKDGFAEGKDLV+SVMSAMGEEQICALKDIG K
Sbjct: 121 DSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGGK 159


>Medtr3g437680.1 | eukaryotic translation initiation factor 5A4 | HC
           | chr3:12821900-12831383 | 20130731
          Length = 160

 Score =  309 bits (791), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 147/159 (92%), Positives = 156/159 (98%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDGF+SLLTENGNTKDDLKLPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 121 EALLSQIKDGFAEGKDLVLSVMSAMGEEQICALKDIGPK 159
           + LL+QIK+GFAEGKDLV+SVMS+MGEEQI ALKDIGPK
Sbjct: 121 DNLLTQIKEGFAEGKDLVVSVMSSMGEEQINALKDIGPK 159


>Medtr3g437680.2 | eukaryotic translation initiation factor 5A4 | HC
           | chr3:12827467-12831667 | 20130731
          Length = 160

 Score =  309 bits (791), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 147/159 (92%), Positives = 156/159 (98%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDGF+SLLTENGNTKDDLKLPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 121 EALLSQIKDGFAEGKDLVLSVMSAMGEEQICALKDIGPK 159
           + LL+QIK+GFAEGKDLV+SVMS+MGEEQI ALKDIGPK
Sbjct: 121 DNLLTQIKEGFAEGKDLVVSVMSSMGEEQINALKDIGPK 159


>Medtr5g042990.1 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905199 | 20130731
          Length = 159

 Score =  304 bits (779), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 145/159 (91%), Positives = 152/159 (95%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRK+G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDGF+SLLTE+G TKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 EALLSQIKDGFAEGKDLVLSVMSAMGEEQICALKDIGPK 159
           E LLSQIKDGF EGKDL++SVMSAMGEEQIC LKDIGPK
Sbjct: 121 ETLLSQIKDGFGEGKDLIVSVMSAMGEEQICGLKDIGPK 159


>Medtr4g130917.1 | eukaryotic translation initiation factor 5A | HC
           | chr4:54581914-54579116 | 20130731
          Length = 159

 Score =  303 bits (777), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 144/159 (90%), Positives = 154/159 (96%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFE  ADAGASKTYPQQAGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           VAIDIF  KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDGF+SLLT+NG+TKDDLKLPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 EALLSQIKDGFAEGKDLVLSVMSAMGEEQICALKDIGPK 159
           ++LL+QIKDGFA+GKDLV+SVMSAMGEEQICALKDIGPK
Sbjct: 121 DSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159


>Medtr5g042990.3 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905255 | 20130731
          Length = 141

 Score =  245 bits (625), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 116/127 (91%), Positives = 122/127 (96%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRK+G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDGF+SLLTE+G TKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 EALLSQI 127
           E LLSQ+
Sbjct: 121 ETLLSQV 127


>Medtr5g042990.4 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905199 | 20130731
          Length = 141

 Score =  245 bits (625), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 116/127 (91%), Positives = 122/127 (96%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRK+G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDGF+SLLTE+G TKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 EALLSQI 127
           E LLSQ+
Sbjct: 121 ETLLSQV 127


>Medtr5g042990.2 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905199 | 20130731
          Length = 146

 Score =  244 bits (624), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 116/127 (91%), Positives = 122/127 (96%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRK+G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDGF+SLLTE+G TKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 EALLSQI 127
           E LLSQ+
Sbjct: 121 ETLLSQV 127


>Medtr4g130917.2 | eukaryotic translation initiation factor 5A | HC
           | chr4:54581812-54579168 | 20130731
          Length = 150

 Score =  243 bits (620), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 117/150 (78%), Positives = 129/150 (86%), Gaps = 1/150 (0%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFE  ADAGASKTYPQQAGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           VAIDIF  KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDGF+SLLT+NG+TKDDLKLPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 EALLSQIKDGFAEGKDLVLSVMSAMGEEQI 150
           ++LL+Q+ D   E     LS +  +    +
Sbjct: 121 DSLLTQM-DLLMEKISWFLSCLRWVKSRYV 149


>Medtr4g109130.2 | eukaryotic translation initiation factor 5A4 | HC
           | chr4:45278237-45276093 | 20130731
          Length = 124

 Score =  210 bits (535), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 102/120 (85%), Positives = 107/120 (89%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDGF+S+L         LKL  D
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSVLFALTKVSVCLKLLID 120


>Medtr4g112440.1 | eukaryotic translation initiation factor 5A | HC
           | chr4:46048544-46047233 | 20130731
          Length = 93

 Score =  148 bits (374), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/102 (70%), Positives = 80/102 (78%), Gaps = 10/102 (9%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           M +    FES ADAGA KT+PQQAGTIRK+GY++IKGRPCKVVEV TSKTGKHGHAKCHF
Sbjct: 1   MVEVAQQFESMADAGAFKTFPQQAGTIRKNGYVLIKGRPCKVVEVQTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFL 102
           V ID+ TA+KLEDIVP SHNCDVPHV           EDGF+
Sbjct: 61  VGIDMVTAEKLEDIVPFSHNCDVPHV----------VEDGFV 92


>Medtr4g130907.1 | eukaryotic translation initiation factor 5A | HC
           | chr4:54576006-54573628 | 20130731
          Length = 145

 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 68/128 (53%), Gaps = 48/128 (37%)

Query: 18  KTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPS 77
           KTYP QAG IR++GYIVI+ RP                                      
Sbjct: 42  KTYPLQAGNIRRNGYIVIESRP-------------------------------------- 63

Query: 78  SHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTDEALLSQIKDGFAEGKDL 137
              C VPHVNR D +LIDI+EDG +SLLT+NG+TKD L       +L  IK+ FAEGKDL
Sbjct: 64  ---CKVPHVNRADDRLIDISEDGSVSLLTDNGSTKDTL-------VLGFIKEEFAEGKDL 113

Query: 138 VLSVMSAM 145
           ++ V+SAM
Sbjct: 114 MVGVVSAM 121