Miyakogusa Predicted Gene

Lj1g3v0526710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0526710.1 tr|B9HXN7|B9HXN7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_886265 PE=4
SV=1,27.21,9e-19,seg,NULL,NODE_53984_length_1511_cov_28.634018.path2.1
         (348 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g037110.1 | transmembrane protein, putative | HC | chr3:13...   372   e-103
Medtr4g109020.1 | transmembrane protein, putative | HC | chr4:45...   342   3e-94
Medtr4g082350.1 | transmembrane protein, putative | HC | chr4:32...    84   2e-16

>Medtr3g037110.1 | transmembrane protein, putative | HC |
           chr3:13581344-13579651 | 20130731
          Length = 324

 Score =  372 bits (955), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 208/330 (63%), Positives = 229/330 (69%), Gaps = 14/330 (4%)

Query: 20  MDGSGKTLRRSIHCFLQNYHYFTSTAAFLAFPFSASILLSQALVPTSSSLLPQIYNHLRI 79
           M+ S K LRRSIH FLQNY YFT T + LAFPFSASILLSQALVP SSSL PQIYNHL+ 
Sbjct: 1   MEVSYKILRRSIHSFLQNYQYFTITISILAFPFSASILLSQALVPFSSSLFPQIYNHLKT 60

Query: 80  LFDAAGFPSSSQLFTR---KVSQXXXXXXXXXXXXXXXXXXAKASTILALNHHRQNLLPP 136
           LFDAAGFPSSSQLFT    KVSQ                  AKA  I ALN +++N  P 
Sbjct: 61  LFDAAGFPSSSQLFTVLNLKVSQTITSSIFTLPFTLTFFLIAKAFIIQALNKNKENFQPS 120

Query: 137 SFNCLIHHYKPILHTYIHNSFLIXXXXXXXXXXXXXXXXXXEGLGYSSPSCTLFLSAATA 196
           S+N     YKPILHTYI+N+  I                  EGLG SS S T+FLSAA A
Sbjct: 121 SYN-----YKPILHTYIYNTLFILSANATTFCFLFLAFSFTEGLGNSSSSFTVFLSAAAA 175

Query: 197 VVSSVILATALVICNMALIISGMEGHGGYMAILKACVLLRGNTSKALFLALPGNLALAAI 256
           V+ SVILA ALVICNMAL +SG+EGHGGYM ILKACV+LRG TS ALFLALP N+ LAAI
Sbjct: 176 VLFSVILANALVICNMALTLSGVEGHGGYMTILKACVVLRGRTSMALFLALPVNVGLAAI 235

Query: 257 EALFQFRVVRAYHNVGNSINSWPFMALEGIFIAYLYSISIIIDTIVSCMFYKSCNM-GSL 315
           EALFQFRVVR Y+       SW F+ALEGIFIAYLYSI IIIDTIVS MFYKSC + GSL
Sbjct: 236 EALFQFRVVRGYY---IDEKSWFFIALEGIFIAYLYSIFIIIDTIVSYMFYKSCKVRGSL 292

Query: 316 VDQEDMHFSRIELAEEQNY--ELGIQELSR 343
           +D+ED HF RIEL EE NY   LGI+    
Sbjct: 293 IDKEDKHFLRIELIEEDNYYGYLGIKNFQE 322


>Medtr4g109020.1 | transmembrane protein, putative | HC |
           chr4:45200284-45202032 | 20130731
          Length = 324

 Score =  342 bits (878), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 191/314 (60%), Positives = 218/314 (69%), Gaps = 10/314 (3%)

Query: 20  MDGSGKTLRRSIHCFLQNYHYFTSTAAFLAFPFSASILLSQALVPTSSSLLPQIYNHLRI 79
           M+ S K LRRSIH FLQNYHYFTS+ AFL FPFSASIL+SQA VP+ SSLLPQIYN LR 
Sbjct: 1   MEVSCKILRRSIHSFLQNYHYFTSSIAFLVFPFSASILISQAFVPSPSSLLPQIYNRLRT 60

Query: 80  LFDAAGFPSSSQLFT---RKVSQXXXXXXXXXXXXXXXXXXAKASTI--LALNHHRQNLL 134
           LFDAAGFPS S LF     KVSQ                  AKAS I  L LNH++ +L 
Sbjct: 61  LFDAAGFPSYSLLFNILNLKVSQTITCSIFSLPFTLTVLLIAKASIIHALKLNHNKPSL- 119

Query: 135 PPSFNCLIHHYKPILHTYIHNSFLIXXXXXXXXXXXXXXXXXXEGLGYSSPSCTLFLSAA 194
           PPSF+ +I  YKP+ HTYI N FLI                  E LGYSSPS  LF+SA 
Sbjct: 120 PPSFSSIIALYKPLFHTYICNCFLIISANATSFCIMFLAFSFVETLGYSSPSFLLFMSAT 179

Query: 195 TAVVSSVILATALVICNMALIISGMEGHGGYMAILKACVLLRGNTSKALFLALPGNLALA 254
            A++ SVILA ALVICNM+L++SGMEGHGGY AILKAC+L+RG TS ALFLALP N+ALA
Sbjct: 180 GAILFSVILANALVICNMSLVLSGMEGHGGYSAILKACILIRGKTSMALFLALPVNIALA 239

Query: 255 AIEALFQFRVVRAYHNVGNSINSWPFMALEGIFIAYLYSISIIIDTIVSCMFYKSCNMG- 313
           AIEALF FR+VR YH VG    + P + LEGIFIAYLYSI II+DTIVSC+FYKS   G 
Sbjct: 240 AIEALFHFRIVREYHIVG---KARPIVLLEGIFIAYLYSIFIILDTIVSCLFYKSFKTGE 296

Query: 314 SLVDQEDMHFSRIE 327
           S + QED HF  ++
Sbjct: 297 SWISQEDKHFQDVD 310


>Medtr4g082350.1 | transmembrane protein, putative | HC |
           chr4:32077565-32075769 | 20130731
          Length = 358

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 143/323 (44%), Gaps = 25/323 (7%)

Query: 27  LRRSIHCFLQNYHYFTSTAAFLAFPFSASILLSQALVPTSSSLLPQIYNHLRILFDAAGF 86
           LR +I     N   F   A  L  P SA +LLS  LV    S++  +   L ++ + +G 
Sbjct: 51  LRETIRILRFNSWAFMIIAFLLICPVSA-VLLSNVLV--DESIVKNLTIRLMLVAETSGL 107

Query: 87  P------SSSQLFTRKVSQXXXXXXXXXXXXXXXXXXAKASTILALN--HHRQNLLPPSF 138
           P       S Q F   V                    +K + + +++  + R+      F
Sbjct: 108 PLRPMIKQSCQRFADTV----IASAMCFPLYATLLLLSKTAVVYSVDCTYSRKKFDGSKF 163

Query: 139 NCLI--HHYKPILHTYIHNSFLIXXXXXXXXXXXXXXXXXXEGLGYSSPSCTLFLSAATA 196
            C+I    ++ IL TY+    +I                    LG+S P+  ++ +    
Sbjct: 164 -CVIVAKFWRKILATYMWACTVIVGCITMFCVFLVAFCSALAVLGFS-PNVVVYAALMVG 221

Query: 197 VVSSVILATALVICNMALIISGMEGHGGYMAILKACVLLRGNTSKALFLALPGNLALAAI 256
           +V SV+ A A++IC++AL+IS +E   G  A+L++ +L++G T   L + L   + +A +
Sbjct: 222 LVFSVVFANAIIICSVALVISVLEDVSGAQAMLRSSILIKGQTQVGLLIYLGSTIGMAFV 281

Query: 257 EALFQFRVVRAYHNVGNSINSWPFMALEGIFIAYLYSISIIIDTIVSCMFYKSCNMGSLV 316
           E LF+ RV    +  G+S   W     EG  +  +YS  ++ID+++S +FY SC   S+ 
Sbjct: 282 EGLFEHRVKTLSYGDGSS-RMW-----EGPLLVIMYSFVVLIDSMMSAVFYFSCRSFSME 335

Query: 317 DQEDMHFSRIELAEEQNYELGIQ 339
           +      S +E        +GIQ
Sbjct: 336 NSNGDGNSILETMAISAETMGIQ 358