Miyakogusa Predicted Gene

Lj1g3v0525430.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0525430.2 Non Characterized Hit- tr|I1KCV4|I1KCV4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39529 PE,82.81,0,SNARE
PROTEIN, PUTATIVE,NULL; VESICLE TRANSPORT V-SNARE PROTEIN
VTI1-RELATED,NULL; V-SNARE,Vesicle t,CUFF.25943.2
         (221 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g037380.3 | vesicle transport V-SNARE protein | HC | chr3:...   372   e-103
Medtr3g037380.1 | vesicle transport V-SNARE protein | HC | chr3:...   372   e-103
Medtr6g012860.1 | vesicle transport V-SNARE protein amine-termin...   321   3e-88
Medtr7g011570.2 | vesicle transport V-SNARE protein amine-termin...   308   2e-84
Medtr7g011570.1 | vesicle transport V-SNARE protein amine-termin...   308   3e-84
Medtr5g042530.1 | vesicle transport V-SNARE protein amine-termin...   292   2e-79
Medtr3g037380.2 | vesicle transport V-SNARE protein | HC | chr3:...   271   3e-73
Medtr5g042530.2 | vesicle transport V-SNARE protein amine-termin...   210   1e-54

>Medtr3g037380.3 | vesicle transport V-SNARE protein | HC |
           chr3:13724559-13727810 | 20130731
          Length = 221

 Score =  372 bits (954), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 179/221 (80%), Positives = 199/221 (90%)

Query: 1   MSEVFEGYERQYCELSANLTRQCTAASALDGEQKKQKLSEIKAGLDDADALVRKMDLEAR 60
           MSEVF+GYERQYCELSA L+RQCTAASALDGEQKKQKLSEIKAGL+DAD L+RKMDLEAR
Sbjct: 1   MSEVFDGYERQYCELSAILSRQCTAASALDGEQKKQKLSEIKAGLEDADTLIRKMDLEAR 60

Query: 61  SLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLAVSNDQR 120
           SLQPSMKATLL KLR+YK DL +LKN++KR++SAN S+TARDELLE GR DSLAVSNDQ+
Sbjct: 61  SLQPSMKATLLAKLREYKTDLNNLKNEVKRVASANASITARDELLELGRIDSLAVSNDQK 120

Query: 121 GRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHGVDDNIS 180
           GRLLM+TERLNQSTDR+ +SRKT+LETEELGVSILQDLHQQRQSLLHAH +LHGVDDNIS
Sbjct: 121 GRLLMTTERLNQSTDRLTNSRKTLLETEELGVSILQDLHQQRQSLLHAHKSLHGVDDNIS 180

Query: 181 RSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLTH 221
           +SKKIL+AMS+RMSRNKWIVGSLM           YFK TH
Sbjct: 181 KSKKILAAMSKRMSRNKWIVGSLMAALVLAIILILYFKFTH 221


>Medtr3g037380.1 | vesicle transport V-SNARE protein | HC |
           chr3:13724518-13727810 | 20130731
          Length = 221

 Score =  372 bits (954), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 179/221 (80%), Positives = 199/221 (90%)

Query: 1   MSEVFEGYERQYCELSANLTRQCTAASALDGEQKKQKLSEIKAGLDDADALVRKMDLEAR 60
           MSEVF+GYERQYCELSA L+RQCTAASALDGEQKKQKLSEIKAGL+DAD L+RKMDLEAR
Sbjct: 1   MSEVFDGYERQYCELSAILSRQCTAASALDGEQKKQKLSEIKAGLEDADTLIRKMDLEAR 60

Query: 61  SLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLAVSNDQR 120
           SLQPSMKATLL KLR+YK DL +LKN++KR++SAN S+TARDELLE GR DSLAVSNDQ+
Sbjct: 61  SLQPSMKATLLAKLREYKTDLNNLKNEVKRVASANASITARDELLELGRIDSLAVSNDQK 120

Query: 121 GRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHGVDDNIS 180
           GRLLM+TERLNQSTDR+ +SRKT+LETEELGVSILQDLHQQRQSLLHAH +LHGVDDNIS
Sbjct: 121 GRLLMTTERLNQSTDRLTNSRKTLLETEELGVSILQDLHQQRQSLLHAHKSLHGVDDNIS 180

Query: 181 RSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLTH 221
           +SKKIL+AMS+RMSRNKWIVGSLM           YFK TH
Sbjct: 181 KSKKILAAMSKRMSRNKWIVGSLMAALVLAIILILYFKFTH 221


>Medtr6g012860.1 | vesicle transport V-SNARE protein amine-terminal
           protein | HC | chr6:4001547-3996927 | 20130731
          Length = 221

 Score =  321 bits (823), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 147/220 (66%), Positives = 188/220 (85%)

Query: 1   MSEVFEGYERQYCELSANLTRQCTAASALDGEQKKQKLSEIKAGLDDADALVRKMDLEAR 60
           MS VFEGYERQYCELSANL+++CTAA+AL+GEQKKQK+SE+K+G+D+A+AL+RKMDLEAR
Sbjct: 1   MSNVFEGYERQYCELSANLSKKCTAATALNGEQKKQKVSEVKSGIDEAEALIRKMDLEAR 60

Query: 61  SLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLAVSNDQR 120
           S+QP++K  LL KLR+YK+DL +LK+++K+I S N++ +ARDELLESG AD++  S DQR
Sbjct: 61  SMQPNIKGVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTMTASADQR 120

Query: 121 GRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHGVDDNIS 180
            RL+ STERLN++ +R+KDSR+TMLETEELGVSILQDLH QRQSLLHAH TLHGVDDNI 
Sbjct: 121 TRLMTSTERLNKTGERVKDSRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIG 180

Query: 181 RSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLT 220
           +SKKI++ MSRRM++NKWI+G ++           YFKL 
Sbjct: 181 KSKKIMTNMSRRMNKNKWIIGCIVLVLVVAIIAILYFKLV 220


>Medtr7g011570.2 | vesicle transport V-SNARE protein amine-terminal
           protein | HC | chr7:3142862-3137623 | 20130731
          Length = 221

 Score =  308 bits (790), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 147/220 (66%), Positives = 186/220 (84%)

Query: 1   MSEVFEGYERQYCELSANLTRQCTAASALDGEQKKQKLSEIKAGLDDADALVRKMDLEAR 60
           MS VFEGYERQYCELS+ L++ CTAA+AL+GEQKKQ +S+IKAG+D+A+AL+RKMDLEAR
Sbjct: 1   MSTVFEGYERQYCELSSKLSKLCTAAAALNGEQKKQNISDIKAGIDEAEALIRKMDLEAR 60

Query: 61  SLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLAVSNDQR 120
           SLQP++K  LL KLR+YK+DL + K+++K++ S N++ +ARD LLESG AD++ VS DQR
Sbjct: 61  SLQPNIKGVLLAKLREYKSDLNNNKSELKKLVSGNMNPSARDMLLESGMADAMTVSADQR 120

Query: 121 GRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHGVDDNIS 180
            RL+ STERLN+S+DRIKDSR+TMLETEELGVSILQDLH QRQSLLHAH TLHGVDDN+S
Sbjct: 121 DRLMFSTERLNKSSDRIKDSRRTMLETEELGVSILQDLHSQRQSLLHAHDTLHGVDDNVS 180

Query: 181 RSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLT 220
           +SKKILS MS+RM+RNK I+ +++           YFKL+
Sbjct: 181 KSKKILSNMSKRMNRNKCIISTIVAVLVLVIMLTLYFKLS 220


>Medtr7g011570.1 | vesicle transport V-SNARE protein amine-terminal
           protein | HC | chr7:3144061-3137751 | 20130731
          Length = 303

 Score =  308 bits (789), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 147/220 (66%), Positives = 186/220 (84%)

Query: 1   MSEVFEGYERQYCELSANLTRQCTAASALDGEQKKQKLSEIKAGLDDADALVRKMDLEAR 60
           MS VFEGYERQYCELS+ L++ CTAA+AL+GEQKKQ +S+IKAG+D+A+AL+RKMDLEAR
Sbjct: 83  MSTVFEGYERQYCELSSKLSKLCTAAAALNGEQKKQNISDIKAGIDEAEALIRKMDLEAR 142

Query: 61  SLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLAVSNDQR 120
           SLQP++K  LL KLR+YK+DL + K+++K++ S N++ +ARD LLESG AD++ VS DQR
Sbjct: 143 SLQPNIKGVLLAKLREYKSDLNNNKSELKKLVSGNMNPSARDMLLESGMADAMTVSADQR 202

Query: 121 GRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHGVDDNIS 180
            RL+ STERLN+S+DRIKDSR+TMLETEELGVSILQDLH QRQSLLHAH TLHGVDDN+S
Sbjct: 203 DRLMFSTERLNKSSDRIKDSRRTMLETEELGVSILQDLHSQRQSLLHAHDTLHGVDDNVS 262

Query: 181 RSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLT 220
           +SKKILS MS+RM+RNK I+ +++           YFKL+
Sbjct: 263 KSKKILSNMSKRMNRNKCIISTIVAVLVLVIMLTLYFKLS 302


>Medtr5g042530.1 | vesicle transport V-SNARE protein amine-terminal
           protein | HC | chr5:18692488-18686987 | 20130731
          Length = 222

 Score =  292 bits (747), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 143/222 (64%), Positives = 178/222 (80%), Gaps = 1/222 (0%)

Query: 1   MSEVFEGYERQYCELSANLTRQCTAASAL-DGEQKKQKLSEIKAGLDDADALVRKMDLEA 59
           MS+VFEGYERQYC+LSANL+R+CT+ S L D E+K QK SEIK GLDDAD L+RKMDLEA
Sbjct: 1   MSQVFEGYERQYCDLSANLSRKCTSTSLLSDQEEKLQKFSEIKTGLDDADVLIRKMDLEA 60

Query: 60  RSLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLAVSNDQ 119
           RSLQPS+KA LL KLR+YK+DL +LK + KR++S      ARD+LLE+GRAD+   S DQ
Sbjct: 61  RSLQPSVKAMLLAKLREYKSDLNNLKKEFKRLTSPTADQAARDDLLETGRADTHLASADQ 120

Query: 120 RGRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHGVDDNI 179
           R RL MS ERLNQS+DRI++S +T+LETEELGVSILQDLHQQR++LL +H  LHGVD+ I
Sbjct: 121 RERLTMSVERLNQSSDRIRESHRTVLETEELGVSILQDLHQQRETLLSSHKRLHGVDNAI 180

Query: 180 SRSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLTH 221
            +SKK+L+AMSRRM+RNKWI+ SL+           ++KL+H
Sbjct: 181 DKSKKVLTAMSRRMTRNKWILASLIGALIFAIVIILFYKLSH 222


>Medtr3g037380.2 | vesicle transport V-SNARE protein | HC |
           chr3:13724615-13727810 | 20130731
          Length = 167

 Score =  271 bits (693), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 131/167 (78%), Positives = 147/167 (88%)

Query: 55  MDLEARSLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLA 114
           MDLEARSLQPSMKATLL KLR+YK DL +LKN++KR++SAN S+TARDELLE GR DSLA
Sbjct: 1   MDLEARSLQPSMKATLLAKLREYKTDLNNLKNEVKRVASANASITARDELLELGRIDSLA 60

Query: 115 VSNDQRGRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHG 174
           VSNDQ+GRLLM+TERLNQSTDR+ +SRKT+LETEELGVSILQDLHQQRQSLLHAH +LHG
Sbjct: 61  VSNDQKGRLLMTTERLNQSTDRLTNSRKTLLETEELGVSILQDLHQQRQSLLHAHKSLHG 120

Query: 175 VDDNISRSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLTH 221
           VDDNIS+SKKIL+AMS+RMSRNKWIVGSLM           YFK TH
Sbjct: 121 VDDNISKSKKILAAMSKRMSRNKWIVGSLMAALVLAIILILYFKFTH 167


>Medtr5g042530.2 | vesicle transport V-SNARE protein amine-terminal
           protein | HC | chr5:18692446-18686987 | 20130731
          Length = 167

 Score =  210 bits (534), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 103/167 (61%), Positives = 131/167 (78%)

Query: 55  MDLEARSLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLA 114
           MDLEARSLQPS+KA LL KLR+YK+DL +LK + KR++S      ARD+LLE+GRAD+  
Sbjct: 1   MDLEARSLQPSVKAMLLAKLREYKSDLNNLKKEFKRLTSPTADQAARDDLLETGRADTHL 60

Query: 115 VSNDQRGRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHG 174
            S DQR RL MS ERLNQS+DRI++S +T+LETEELGVSILQDLHQQR++LL +H  LHG
Sbjct: 61  ASADQRERLTMSVERLNQSSDRIRESHRTVLETEELGVSILQDLHQQRETLLSSHKRLHG 120

Query: 175 VDDNISRSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLTH 221
           VD+ I +SKK+L+AMSRRM+RNKWI+ SL+           ++KL+H
Sbjct: 121 VDNAIDKSKKVLTAMSRRMTRNKWILASLIGALIFAIVIILFYKLSH 167