Miyakogusa Predicted Gene

Lj1g3v0514230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0514230.1 Non Characterized Hit- tr|K4BYQ4|K4BYQ4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,44.9,1e-18,
,CUFF.25937.1
         (256 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g085380.1 | meiotic asynaptic mutant protein | HC | chr3:3...   393   e-110

>Medtr3g085380.1 | meiotic asynaptic mutant protein | HC |
           chr3:38585219-38580046 | 20130731
          Length = 613

 Score =  393 bits (1010), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 200/272 (73%), Positives = 220/272 (80%), Gaps = 20/272 (7%)

Query: 1   MDKLVMEGVLSKSGNDTYAITKDKISEYEFTVVKEEVVGQIPQVFDRALQGEDLLYMKAL 60
           MD LV EG LSK GNDTYAI KDK SEYEFT+VKEE  GQ P V DRALQGEDL+YMKAL
Sbjct: 343 MDNLVKEGELSKIGNDTYAIKKDKKSEYEFTIVKEEFDGQNPPVLDRALQGEDLIYMKAL 402

Query: 61  YHTLPMTYVSVTKLQGLLEGEVNQTAARKMIDKMIRDGFVEPKGNKRLGKRVIHSELTER 120
           YHTLPM YVSVTKLQ   +GE++QTAARK+I+KM RDGFVEPKG+KRLGKRVIHSELTER
Sbjct: 403 YHTLPMAYVSVTKLQSSFQGEISQTAARKIIEKMTRDGFVEPKGSKRLGKRVIHSELTER 462

Query: 121 KFIEVQKAITAVEAMDVDNCEPNK----------------STCGVLHSIGSDLTRMIVTS 164
           K++EVQ+A+ A EAMDVD+CEPN                 STCGVLHSIGSDLTRM VTS
Sbjct: 463 KYVEVQQALGAAEAMDVDHCEPNSKSKKAGYRMSGSNRDISTCGVLHSIGSDLTRMKVTS 522

Query: 165 DTNYSDFKSGHKTPKAKEPGNNPTSRTEPVTSRESFAQGKENSTANGNRIANQGDDEAAE 224
           + N +D  SG K PKAKEPG  PTSR  PV SRESFA GKENSTANGN IAN+GD  AA+
Sbjct: 523 ELNDTDSMSGPKMPKAKEPGTTPTSR--PVASRESFAHGKENSTANGNGIANEGD--AAD 578

Query: 225 TIICSRSSQDKRPRKTSAVKEPIHQNVKRQRT 256
           TIICSRSSQDKRPRK SAVK+PIHQ+VKRQR+
Sbjct: 579 TIICSRSSQDKRPRKASAVKDPIHQSVKRQRS 610