Miyakogusa Predicted Gene

Lj1g3v0488980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0488980.1 tr|C6T857|C6T857_SOYBN Isocitrate dehydrogenase
[NADP] OS=Glycine max GN=Gma.51869 PE=2
SV=1,94.88,0,Isocitrate/Isopropylmalate dehydrogenase-like,NULL;
IDH_IMDH,Isocitrate/isopropylmalate dehydrogenas,CUFF.26592.1
         (412 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g077070.2 | NADP-dependent isocitrate dehydrogenase | HC |...   814   0.0  
Medtr5g077070.1 | NADP-dependent isocitrate dehydrogenase | HC |...   814   0.0  
Medtr2g062840.1 | NADP-dependent isocitrate dehydrogenase | HC |...   744   0.0  
Medtr6g005470.1 | NADP-dependent isocitrate dehydrogenase | HC |...   694   0.0  

>Medtr5g077070.2 | NADP-dependent isocitrate dehydrogenase | HC |
           chr5:32875308-32880347 | 20130731
          Length = 412

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/412 (94%), Positives = 399/412 (96%)

Query: 1   MAFDKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFDLGLPYRDETDDKVTV 60
           M F KIKVANPIVEMDGDEMTR+IWK IKDKLILPF+ELDIKYFDLGLPYRDETDDKVTV
Sbjct: 1   MGFQKIKVANPIVEMDGDEMTRIIWKYIKDKLILPFVELDIKYFDLGLPYRDETDDKVTV 60

Query: 61  ESAEATLKYNVAIKCATITPDEARVKEFGLKQMWRSPNGTIRNILNGTVFREPILCKNVP 120
           ESAEATLKYNVAIKCATITPDEARVKEFGLK MWRSPNGTIRNILNGTVFREPI+CKN+P
Sbjct: 61  ESAEATLKYNVAIKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPIICKNIP 120

Query: 121 RLVPGWTKAICIGRHAFGDQYRATDQVIKGAGKLKLVFVPEGQGEETELEVYNFTGQGGV 180
           RL+PGWTK ICIGRHAFGDQYRATD VIKG GKLKLVFVPEGQGE T+LEVYNFTG+GGV
Sbjct: 121 RLIPGWTKPICIGRHAFGDQYRATDSVIKGPGKLKLVFVPEGQGETTDLEVYNFTGEGGV 180

Query: 181 ALAMYNTDESIRSFAEASMATAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSK 240
           ALAMYNTDESIRSFAEASMA A EKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSK
Sbjct: 181 ALAMYNTDESIRSFAEASMAVALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSK 240

Query: 241 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300
           YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP
Sbjct: 241 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300

Query: 301 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLSDFTDK 360
           DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNA L DFT+K
Sbjct: 301 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNATLLDFTEK 360

Query: 361 LEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELKAKLSA 412
           LEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAA+LK K+SA
Sbjct: 361 LEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAADLKTKISA 412


>Medtr5g077070.1 | NADP-dependent isocitrate dehydrogenase | HC |
           chr5:32875291-32880357 | 20130731
          Length = 412

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/412 (94%), Positives = 399/412 (96%)

Query: 1   MAFDKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFDLGLPYRDETDDKVTV 60
           M F KIKVANPIVEMDGDEMTR+IWK IKDKLILPF+ELDIKYFDLGLPYRDETDDKVTV
Sbjct: 1   MGFQKIKVANPIVEMDGDEMTRIIWKYIKDKLILPFVELDIKYFDLGLPYRDETDDKVTV 60

Query: 61  ESAEATLKYNVAIKCATITPDEARVKEFGLKQMWRSPNGTIRNILNGTVFREPILCKNVP 120
           ESAEATLKYNVAIKCATITPDEARVKEFGLK MWRSPNGTIRNILNGTVFREPI+CKN+P
Sbjct: 61  ESAEATLKYNVAIKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPIICKNIP 120

Query: 121 RLVPGWTKAICIGRHAFGDQYRATDQVIKGAGKLKLVFVPEGQGEETELEVYNFTGQGGV 180
           RL+PGWTK ICIGRHAFGDQYRATD VIKG GKLKLVFVPEGQGE T+LEVYNFTG+GGV
Sbjct: 121 RLIPGWTKPICIGRHAFGDQYRATDSVIKGPGKLKLVFVPEGQGETTDLEVYNFTGEGGV 180

Query: 181 ALAMYNTDESIRSFAEASMATAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSK 240
           ALAMYNTDESIRSFAEASMA A EKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSK
Sbjct: 181 ALAMYNTDESIRSFAEASMAVALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSK 240

Query: 241 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300
           YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP
Sbjct: 241 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300

Query: 301 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLSDFTDK 360
           DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNA L DFT+K
Sbjct: 301 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNATLLDFTEK 360

Query: 361 LEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELKAKLSA 412
           LEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAA+LK K+SA
Sbjct: 361 LEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAADLKTKISA 412


>Medtr2g062840.1 | NADP-dependent isocitrate dehydrogenase | HC |
           chr2:26561074-26567297 | 20130731
          Length = 416

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/411 (85%), Positives = 375/411 (91%)

Query: 1   MAFDKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFDLGLPYRDETDDKVTV 60
           M F KI+V NPIVEMDGDEMTRVIW+ IKDKLI PFLELDIKYFDLGLP+RD T+D+VTV
Sbjct: 1   MGFQKIRVDNPIVEMDGDEMTRVIWRMIKDKLIFPFLELDIKYFDLGLPHRDATNDRVTV 60

Query: 61  ESAEATLKYNVAIKCATITPDEARVKEFGLKQMWRSPNGTIRNILNGTVFREPILCKNVP 120
           ES EATLKYNVAIKCATITPDE RVKEF LKQMW+SPNGTIRNILNGTVFREPI+CKN+P
Sbjct: 61  ESGEATLKYNVAIKCATITPDEGRVKEFNLKQMWKSPNGTIRNILNGTVFREPIICKNIP 120

Query: 121 RLVPGWTKAICIGRHAFGDQYRATDQVIKGAGKLKLVFVPEGQGEETELEVYNFTGQGGV 180
           RLV GWTK ICIGRHAFGDQYRATD VIKG GKLKLVF P G  E  ELEVYNFTG GGV
Sbjct: 121 RLVSGWTKPICIGRHAFGDQYRATDAVIKGPGKLKLVFAPSGHEEPKELEVYNFTGAGGV 180

Query: 181 ALAMYNTDESIRSFAEASMATAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSK 240
            LAMYNTDESIR+FAEASM  A EKKWPLYLSTKNTILKKYDGRFKDIFQEVY++ W  K
Sbjct: 181 GLAMYNTDESIRAFAEASMNIALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYDSKWSHK 240

Query: 241 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300
           ++AAGIWYEHRLIDDMVAYALKS+GGYVWACKNYDGDVQSDF+AQGFGSLGLMTS LVCP
Sbjct: 241 FKAAGIWYEHRLIDDMVAYALKSDGGYVWACKNYDGDVQSDFIAQGFGSLGLMTSTLVCP 300

Query: 301 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLSDFTDK 360
           DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAW++GLAHRAKLD NA+L DFT+K
Sbjct: 301 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWSQGLAHRAKLDGNARLLDFTEK 360

Query: 361 LEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELKAKLS 411
           LEAACIG VE GKMTKDLAL++HG K+SR HYLNTEEFIDAVA EL+ +L+
Sbjct: 361 LEAACIGTVELGKMTKDLALLIHGPKVSRSHYLNTEEFIDAVAEELRTRLT 411


>Medtr6g005470.1 | NADP-dependent isocitrate dehydrogenase | HC |
           chr6:768370-775713 | 20130731
          Length = 482

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/405 (80%), Positives = 358/405 (88%), Gaps = 1/405 (0%)

Query: 6   IKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFDLGLPYRDETDDKVTVESAEA 65
           I VANPIVEMDGDEMTR+IWK IKDKLI P+L+L+IKYFDLG+  RD T+D+VTVESAEA
Sbjct: 73  IHVANPIVEMDGDEMTRIIWKMIKDKLIFPYLDLNIKYFDLGVLNRDATEDRVTVESAEA 132

Query: 66  TLKYNVAIKCATITPDEARVKEFGLKQMWRSPNGTIRNILNGTVFREPILCKNVPRLVPG 125
           TLKYNVA+KCATITPDE RVKEFGLK MWRSPNGTIRNILNGTVFREPI+C+N+PR++PG
Sbjct: 133 TLKYNVAVKCATITPDETRVKEFGLKSMWRSPNGTIRNILNGTVFREPIICRNIPRIIPG 192

Query: 126 WTKAICIGRHAFGDQYRATDQVIKGAGKLKLVFVPEGQGEETELEVYNFTGQGGVALAMY 185
           W K ICIGRHAFGDQYRATD VI G GKLKLVFVPE      EL+V++F G G VALAMY
Sbjct: 193 WKKPICIGRHAFGDQYRATDTVINGPGKLKLVFVPEDGDTPVELDVHDFKGPG-VALAMY 251

Query: 186 NTDESIRSFAEASMATAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSKYEAAG 245
           N DESIR+FAE+SM+ A+ KKWPLYLSTKNTILKKYDGRFKDIFQEVYE  W+ K+E   
Sbjct: 252 NVDESIRAFAESSMSLAFTKKWPLYLSTKNTILKKYDGRFKDIFQEVYEERWRQKFEEHS 311

Query: 246 IWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTI 305
           IWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSD LAQGFGSLGLMTSVL+  DGKT+
Sbjct: 312 IWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDLLAQGFGSLGLMTSVLLSSDGKTL 371

Query: 306 EAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLSDFTDKLEAAC 365
           EAEAAHGTVTRHFR HQKG ETSTNSIASIFAWTRGL HRAKLD N KL DF DKLEAAC
Sbjct: 372 EAEAAHGTVTRHFRFHQKGQETSTNSIASIFAWTRGLEHRAKLDKNEKLLDFADKLEAAC 431

Query: 366 IGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELKAKL 410
           +  VESGKMTKDLAL++HG K+SRE YLNTEEFIDAVA+ L+ KL
Sbjct: 432 VETVESGKMTKDLALLIHGPKVSREFYLNTEEFIDAVASNLERKL 476