Miyakogusa Predicted Gene

Lj1g3v0465670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0465670.1 Non Characterized Hit- tr|F6GTZ3|F6GTZ3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.45,0.00000000003,seg,NULL,CUFF.25896.1
         (378 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g108100.1 | hypothetical protein | HC | chr4:44807782-4480...   312   4e-85
Medtr4g060050.1 | hypothetical protein | HC | chr4:22162617-2216...    72   1e-12

>Medtr4g108100.1 | hypothetical protein | HC |
           chr4:44807782-44804892 | 20130731
          Length = 392

 Score =  312 bits (799), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 200/394 (50%), Positives = 257/394 (65%), Gaps = 25/394 (6%)

Query: 7   DQQPSSATSSGNSS--RPKLQRYALRSVTKSKEEKPSAPNS---SESKRGGNASTVSKSV 61
           ++Q S+   SGNS+  +PKLQRY LRS ++SKE+KP A  +   S+SKRG +   VS+SV
Sbjct: 2   EEQQSTVDVSGNSASGKPKLQRYPLRSASRSKEQKPDASVTTIPSQSKRGRSIPNVSQSV 61

Query: 62  GVLDFSAKDKSGSAKPPRRFSNPAKASPTPGHKVASNITPISETRTGRTPYGQ---GRGK 118
           GVL+FS KD+S SAKPPRR SNP KAS TP  K   NITPISETR+ R+   Q    R +
Sbjct: 62  GVLEFSGKDRSSSAKPPRRLSNPVKASATPSPKAVGNITPISETRSRRSGNSQEPPTRTR 121

Query: 119 TTPISEISRTSSRVKLNLLTSPSYWLNQIKLSESAAKHSISLGFFKLALEAGCEPLKSMQ 178
           T P+SEI R+S+++K +LL+S SYWL+QIKLSE+  KH+ISLGFFKLALEAGCEP + +Q
Sbjct: 122 T-PVSEIFRSSTKMKFSLLSSASYWLSQIKLSENVEKHNISLGFFKLALEAGCEPFQKLQ 180

Query: 179 EELKSYVSRHQ--LAELGESVKELLERYNISENIEQLQVSETISQVPEDGNRXXXXX-XX 235
           +ELKSY+ RHQ  L ELGE VK L+E YNI+E IEQ QVSE+ISQ+PE+  R        
Sbjct: 181 DELKSYLRRHQQKLTELGEQVKVLVESYNIAEIIEQSQVSESISQMPEEETRSSDDEGNF 240

Query: 236 XXXXTMEARKLKPKCLNIDSPQPQLNTPAIESNKKEN------TESTQLTTPA--IESNR 287
               TM   KL PKCLN  S Q      AIES KKE       T S+Q+T+P   IES +
Sbjct: 241 STSSTMVTGKLTPKCLNTASIQVTSPVKAIESPKKETSQKKNLTASSQVTSPVKTIESPK 300

Query: 288 KETSQKGSPGSRLRGKLSTNSKTPRPALDSGNRRSGRNSEKPSKQEASKDKGMVRRQGKK 347
           KETSQK   G++L+  L  NS   + A  S NR         S +  +K  G V++ G+K
Sbjct: 301 KETSQKKIFGTKLKENLRMNSAISKSASGSLNRSRSVKKSDKSSKLETKKSG-VKKYGRK 359

Query: 348 SDVK-VPVS--TPKGNKENKDVQTNEEVSMVEVL 378
           +D K V VS  T    KEN DV++ ++  ++EV+
Sbjct: 360 ADAKEVSVSPITSTEEKENMDVRSTDD-DLIEVM 392


>Medtr4g060050.1 | hypothetical protein | HC |
           chr4:22162617-22164505 | 20130731
          Length = 213

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 54/81 (66%), Gaps = 3/81 (3%)

Query: 110 TPYGQGRGKT--TPISEISRTSSRVKLNLLTSPSYWLNQIKLSESAAKHSISLGFFKLAL 167
           T +G+G+ K   TP    +   S+ + + L + SYW+ QIKL+ES  KH ++ GFFKLAL
Sbjct: 123 TSHGRGKSKVQATPFYS-AVNCSKCRFDKLETSSYWIGQIKLAESVGKHFVASGFFKLAL 181

Query: 168 EAGCEPLKSMQEELKSYVSRH 188
           ++  E +++++ ELK Y+SRH
Sbjct: 182 KSQAESIRNLRIELKRYLSRH 202