Miyakogusa Predicted Gene

Lj1g3v0453350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0453350.1 Non Characterized Hit- tr|B9R947|B9R947_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,72.22,0.0000000003,seg,NULL; coiled-coil,NULL,57807_g.1
         (106 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g437860.1 | hypothetical protein | HC | chr3:12920268-1291...    49   7e-07

>Medtr3g437860.1 | hypothetical protein | HC |
           chr3:12920268-12919951 | 20130731
          Length = 105

 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 3/45 (6%)

Query: 58  PVKLRAKLGKLDSKMQALTAKREEILKLLQEVETKPSESNEPAVG 102
           P  L+ KL KL++KMQAL AK+EEILKLL+E ET    S EPAV 
Sbjct: 62  PAILKQKLEKLETKMQALVAKKEEILKLLKEAETN---STEPAVA 103