Miyakogusa Predicted Gene

Lj1g3v0438910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0438910.1 Non Characterized Hit- tr|H3ASX4|H3ASX4_LATCH
Uncharacterized protein (Fragment) OS=Latimeria chalum,38.35,2e-19,no
description,Six-bladed beta-propeller, TolB-like;
GSDH,Glucose/Sorbosone dehydrogenase; THYROID H,CUFF.25860.1
         (154 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g107400.1 | hipl2 protein precursor | HC | chr4:44415144-4...   211   3e-55

>Medtr4g107400.1 | hipl2 protein precursor | HC |
           chr4:44415144-44409998 | 20130731
          Length = 697

 Score =  211 bits (536), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 91/136 (66%), Positives = 113/136 (83%)

Query: 1   MNLWGNYSVPKDNPYLDDKELEPEIWAIGFKNAWRCSFDSQRPSYFLCGDAGQDKYEEID 60
           + LWG+YS+PKDNP+ +DK+LEPEIWA+G +N WRCSFDS++PSYF CGD GQD YEE+D
Sbjct: 433 LGLWGSYSIPKDNPFSEDKDLEPEIWALGLRNPWRCSFDSEKPSYFFCGDVGQDLYEEVD 492

Query: 61  VIKKGKNYGWRVYEGPFIFHPSESPGGNTSTSSIHPIFPVMGYNHSEIDNESGSASIVGG 120
           +I KG NYGWRVYEG + F  +ESPGGNTS  SI+PI P+ GYNHS+I+   GSASI GG
Sbjct: 493 LITKGGNYGWRVYEGLYPFTTTESPGGNTSLKSINPIPPIAGYNHSQINKNEGSASITGG 552

Query: 121 YFYRAMTDPCLYGRLV 136
           Y YR+MTDPC++GR +
Sbjct: 553 YVYRSMTDPCMFGRYL 568