Miyakogusa Predicted Gene

Lj1g3v0427860.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0427860.1 tr|Q75G50|Q75G50_ORYSJ Os05g0220900 protein
OS=Oryza sativa subsp. japonica GN=B1003C08.7 PE=4
SV=1,28.24,5e-17,coiled-coil,NULL; seg,NULL,CUFF.25857.1
         (361 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0168s0110.1 | plant/T23J7-180 protein, putative | HC | scaf...   288   7e-78

>Medtr0168s0110.1 | plant/T23J7-180 protein, putative | HC |
           scaffold0168:32792-29355 | 20130731
          Length = 348

 Score =  288 bits (736), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 184/379 (48%), Positives = 216/379 (56%), Gaps = 54/379 (14%)

Query: 1   MVAISLYRGNLHRVPDVPRRWLMPNPKISIKNFKSLLDRRSKALSRXXXXXXXXXXXXXX 60
           MVAISLYRGNLHR PDVPRRWLMPNPKIS+K+FKSLL RRSKALSR              
Sbjct: 6   MVAISLYRGNLHRAPDVPRRWLMPNPKISLKDFKSLLSRRSKALSRTSSSSNPNPNPNPN 65

Query: 61  XXXXXXHGEGPSNAAVKEQQQQPHRKESELVAGN--------SDQKPLINS--KNNGFEK 110
                   + PS+    +Q  Q   +  +               +KPL  S  KN+G EK
Sbjct: 66  HVV----DDVPSSTTNLKQLIQISNEPEKEEEEQEQEQEELVDSKKPLDGSEFKNDGLEK 121

Query: 111 ASNGAA------TSIEKQAELPVTDNGGMLTDNKQKRKREVEDKLQVLNGKKHNLVLVLK 164
            S+  A      TS+E Q +  + ++  +L D  +KRK+EV+DKLQVLN KKHNLVLVLK
Sbjct: 122 VSDDDAAAAAAATSMEIQTDPIIENHVDLLNDEDEKRKKEVQDKLQVLNAKKHNLVLVLK 181

Query: 165 QVQNNGLVFHVSVCVCLLCFMNDELTGLIDRQILNAEEELKRRNSVLQPGVAMRGMSILP 224
           Q                               ILNAEEELKRRNSV Q G+AMRG S+  
Sbjct: 182 Q-------------------------------ILNAEEELKRRNSVQQQGIAMRGPSVPL 210

Query: 225 QPDGTNDNGSMTRHMTTR--SEGNIXXXXXXXXXXXXSANHNVQYSRHVLRTXXXXXXXX 282
           + DGTND  S++R+M  R  SEGN+            + NHN+Q+SR VLRT        
Sbjct: 211 KADGTNDTASVSRYMAPRVGSEGNLVGDMDGVEADDFT-NHNMQHSRLVLRTSSMSPSSD 269

Query: 283 XXLRRTPNVQPNVVSHPARASLGATVSPSRFALSGHQGNPMNPPSVSVSGTSYIXXXXXX 342
             LRRTP+ Q N+VS+PAR S  A  SPSRFA SG QGNPMN PSVSVSGTSYI      
Sbjct: 270 SPLRRTPSGQQNMVSNPARGSFAAAGSPSRFAQSGQQGNPMNLPSVSVSGTSYIASSPSP 329

Query: 343 XXXGGTSVFRDARQPSPWK 361
              GGTSVFRDAR PSPWK
Sbjct: 330 AASGGTSVFRDARHPSPWK 348