Miyakogusa Predicted Gene

Lj1g3v0426840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0426840.1 Non Characterized Hit- tr|I3SI98|I3SI98_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,92.09,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
coiled-coil,NULL; seg,NULL; helix ,CUFF.25856.1
         (253 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g037250.1 | transcription factor | HC | chr5:16271354-1626...   214   5e-56
Medtr8g062240.1 | transcription factor | HC | chr8:26004535-2600...   209   2e-54
Medtr7g053410.2 | BHLH transcription factor | HC | chr7:18808900...   160   9e-40
Medtr7g053410.1 | BHLH transcription factor | HC | chr7:18808902...   160   9e-40
Medtr8g012290.1 | BHLH transcription factor | HC | chr8:3449775-...   158   6e-39
Medtr8g012290.2 | BHLH transcription factor | HC | chr8:3449797-...   158   6e-39
Medtr4g070320.1 | transcription factor | HC | chr4:26483456-2648...   153   2e-37
Medtr5g048860.7 | BHLH transcription factor | HC | chr5:21359767...   152   2e-37
Medtr5g048860.6 | BHLH transcription factor | HC | chr5:21359767...   152   2e-37
Medtr5g048860.5 | BHLH transcription factor | HC | chr5:21359767...   152   2e-37
Medtr5g048860.1 | BHLH transcription factor | HC | chr5:21359821...   152   2e-37
Medtr5g048860.3 | BHLH transcription factor | HC | chr5:21360103...   152   2e-37
Medtr5g048860.10 | BHLH transcription factor | HC | chr5:2136019...   152   2e-37
Medtr5g048860.4 | BHLH transcription factor | HC | chr5:21360103...   152   2e-37
Medtr5g048860.8 | BHLH transcription factor | HC | chr5:21359821...   152   2e-37
Medtr5g048860.9 | BHLH transcription factor | HC | chr5:21360103...   152   2e-37
Medtr5g048860.2 | BHLH transcription factor | HC | chr5:21360103...   152   2e-37
Medtr8g065740.1 | transcription factor | HC | chr8:27327298-2733...   150   1e-36
Medtr3g116770.1 | BHLH transcription factor | HC | chr3:54614928...   149   2e-36
Medtr3g116770.2 | BHLH transcription factor | HC | chr3:54614928...   149   3e-36
Medtr1g017350.3 | transcription factor | HC | chr1:4807563-48009...   142   3e-34
Medtr1g017350.2 | transcription factor | HC | chr1:4805633-48009...   142   3e-34
Medtr1g017350.1 | transcription factor | HC | chr1:4805633-48009...   142   3e-34
Medtr1g017350.5 | transcription factor | HC | chr1:4805633-48009...   141   7e-34
Medtr1g017350.4 | transcription factor | HC | chr1:4805633-48009...   141   7e-34
Medtr8g099880.1 | basic helix loop helix protein BHLH8 | HC | ch...   140   2e-33
Medtr3g498825.1 | transcription factor bHLH137 | HC | chr3:45174...   139   3e-33
Medtr1g059270.2 | transcription factor | HC | chr1:21508218-2151...   132   3e-31
Medtr1g059270.1 | transcription factor | HC | chr1:21508003-2151...   132   3e-31
Medtr7g092510.1 | transcription factor | HC | chr7:36672741-3666...   132   4e-31
Medtr6g084120.1 | transcription factor | HC | chr6:31420208-3142...   100   3e-21
Medtr4g131160.1 | BHLH transcription factor | HC | chr4:54719229...    94   1e-19
Medtr4g131160.2 | BHLH transcription factor | HC | chr4:54719229...    94   1e-19
Medtr1g080890.1 | transcription factor UNE12-like protein | HC |...    88   7e-18
Medtr4g107320.1 | basic helix loop helix (bHLH) DNA-binding supe...    79   5e-15
Medtr4g065870.1 | transcription factor bHLH122-like protein | HC...    75   7e-14
Medtr1g069155.1 | transcription factor | HC | chr1:29736862-2972...    73   3e-13
Medtr4g065870.3 | transcription factor bHLH122-like protein | HC...    72   4e-13
Medtr1g084980.1 | phytochrome-interacting factor 3.1 | HC | chr1...    72   4e-13
Medtr2g098310.4 | transcription factor bHLH122-like protein | HC...    72   5e-13
Medtr1g070870.2 | basic helix loop helix protein BHLH4 | HC | ch...    71   1e-12
Medtr1g070870.1 | basic helix loop helix protein BHLH4 | HC | ch...    71   1e-12
Medtr2g098310.1 | transcription factor bHLH122-like protein | HC...    71   1e-12
Medtr1g052470.1 | transcription factor bHLH122-like protein | HC...    70   3e-12
Medtr4g033295.1 | transcription factor | HC | chr4:11668601-1166...    69   4e-12
Medtr4g033295.2 | transcription factor | HC | chr4:11668601-1166...    69   6e-12
Medtr7g099540.2 | transcription factor | HC | chr7:39933891-3993...    67   2e-11
Medtr7g092540.1 | transcription factor bHLH122-like protein | HC...    65   5e-11
Medtr1g018090.1 | helix loop helix DNA-binding domain protein | ...    65   6e-11
Medtr3g028520.2 | transcription factor bHLH122-like protein | HC...    65   7e-11
Medtr3g028520.1 | transcription factor bHLH122-like protein | HC...    65   7e-11
Medtr3g027650.1 | transcription factor bHLH122-like protein | HC...    65   7e-11
Medtr1g116790.1 | transcription factor | HC | chr1:52858896-5285...    65   7e-11
Medtr8g036235.1 | transcription factor bHLH122-like protein | HC...    65   7e-11
Medtr7g092540.2 | transcription factor bHLH122-like protein | HC...    64   1e-10
Medtr3g101810.1 | transcription factor | HC | chr3:46898499-4689...    64   1e-10
Medtr5g005110.1 | transcription factor | HC | chr5:277903-279787...    64   2e-10
Medtr1g019240.1 | helix loop helix DNA-binding domain protein | ...    63   2e-10
Medtr3g027650.3 | transcription factor bHLH122-like protein | HC...    63   3e-10
Medtr7g099540.1 | transcription factor | HC | chr7:39933891-3993...    62   5e-10
Medtr7g110810.1 | helix loop helix DNA-binding domain protein | ...    62   5e-10
Medtr3g103030.1 | transcription factor | HC | chr3:47454820-4745...    62   7e-10
Medtr7g111320.1 | phytochrome-interacting factor 3.1 | HC | chr7...    61   9e-10
Medtr3g449770.1 | transcription factor | HC | chr3:16987989-1699...    61   1e-09
Medtr1g106470.1 | transcription factor | HC | chr1:48147124-4814...    61   1e-09
Medtr2g098310.5 | transcription factor bHLH122-like protein | HC...    59   3e-09
Medtr5g017040.1 | helix loop helix DNA-binding domain protein | ...    59   4e-09
Medtr5g048350.1 | transcription factor BIM2-like protein | HC | ...    58   1e-08
Medtr4g065870.2 | transcription factor bHLH122-like protein | HC...    57   1e-08
Medtr2g098310.2 | transcription factor bHLH122-like protein | HC...    57   1e-08
Medtr8g093500.1 | basic helix loop helix (BHLH) DNA-binding fami...    57   2e-08
Medtr1g106460.1 | basic helix loop helix (BHLH) DNA-binding fami...    55   7e-08
Medtr1g106480.1 | helix loop helix DNA-binding domain protein | ...    55   9e-08
Medtr5g079500.1 | BHLH transcription factor, putative | HC | chr...    54   2e-07
Medtr5g014600.1 | basic helix loop helix (bHLH) DNA-binding fami...    52   6e-07
Medtr4g092700.1 | helix loop helix DNA-binding domain protein | ...    50   1e-06
Medtr4g091910.1 | helix loop helix DNA-binding domain protein | ...    50   3e-06
Medtr4g097940.1 | basic helix loop helix (bHLH) DNA-binding fami...    50   3e-06
Medtr7g069590.1 | helix loop helix DNA-binding domain protein | ...    49   3e-06
Medtr4g097950.1 | basic helix loop helix (bHLH) DNA-binding fami...    49   6e-06
Medtr1g084980.2 | phytochrome-interacting factor 3.1 | HC | chr1...    49   6e-06

>Medtr5g037250.1 | transcription factor | HC |
           chr5:16271354-16268287 | 20130731
          Length = 239

 Score =  214 bits (546), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 124/244 (50%), Positives = 147/244 (60%), Gaps = 18/244 (7%)

Query: 14  AFALAEIW----PRPGGGADEHSTVTQLTAAAR--NHGSRIKMKNNNDSTTSEDDCSKND 67
           A+ L EIW    P    G  + S +  LT+  +  NH  +I    N DS      C    
Sbjct: 4   AYHLPEIWQSRPPHLAPGYPDFS-IQDLTSEQKPLNHARKITRVTNEDSV----QCVSTT 58

Query: 68  SGNKRIRLXXXXXXXXXXXXXXLKAAEASSVAGSNNSDEQSTKPSESEP-PKQDYIHVRA 126
           +G  R                  ++  + +  G  NS  +  + +  EP PK+DYIHVRA
Sbjct: 59  NGGAR----GNSNAVNDDGGDGKRSKTSGNSKGEENSSGKHAEETSDEPHPKKDYIHVRA 114

Query: 127 RRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEF 186
           RRGQATDSHS+AERARREKISERMK LQDLVPGCNK+IGKALVLDEIINYIQSL HQVEF
Sbjct: 115 RRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEF 174

Query: 187 LSMKLEAVNSRANLNPTNEGFPSKDVVTQPFDIAGVIYESQAARGYAQGSHPGWLHMQIG 246
           LSMKLEAVNSR    P  E FP K    Q FD   + + S A R Y++G+ P WLHMQ+G
Sbjct: 175 LSMKLEAVNSRP--TPGMEVFPPKTFDQQTFDTTAIPFASHATREYSRGASPEWLHMQLG 232

Query: 247 GGFE 250
           GGFE
Sbjct: 233 GGFE 236


>Medtr8g062240.1 | transcription factor | HC |
           chr8:26004535-26001034 | 20130731
          Length = 278

 Score =  209 bits (533), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 104/133 (78%), Positives = 112/133 (84%), Gaps = 2/133 (1%)

Query: 121 YIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSL 180
           YIHVRARRGQATDSHS+AERARREKISERMKILQDLVPGCNK+IGKALVLDEIINYIQSL
Sbjct: 148 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207

Query: 181 QHQVEFLSMKLEAVNSRANLNPTNEGFPSKDVVTQPFDIAGVIYESQAARGYAQGSHPGW 240
           Q QVEFLSMKLEAVNSR  LN   E FP KD   Q FD+AG+ + SQA R  ++GS P W
Sbjct: 208 QRQVEFLSMKLEAVNSR--LNTGIEAFPPKDYGQQTFDLAGMPFVSQATREPSRGSSPEW 265

Query: 241 LHMQIGGGFEGAT 253
           LHMQ+GGGFE  T
Sbjct: 266 LHMQVGGGFERTT 278


>Medtr7g053410.2 | BHLH transcription factor | HC |
           chr7:18808900-18812617 | 20130731
          Length = 535

 Score =  160 bits (406), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 125/213 (58%), Gaps = 12/213 (5%)

Query: 42  RNHGSRIKMKNNNDSTTSEDDCSKNDSGNKRIRLXXXXXXXXXXXXXXLKAA-EASSVAG 100
           R   S+ K K  + S+     C   DS  KR++               +KA  E+     
Sbjct: 236 RKVSSKGKTKETSTSSNPPMACEAEDSNAKRMK----TNEGEKIENGKVKAEDESKGGTN 291

Query: 101 SNNSDEQSTKPSESEPPK--QDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVP 158
           SNN  ++    S S+PP+  +DYIHVRARRGQATDSHS+AER RREKISERMK+LQDLVP
Sbjct: 292 SNNGGDEKQNKSNSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 351

Query: 159 GCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPSKDVVTQPFD 218
           GCNK+ GKAL+LDEIINY+QSLQ QVEFLSMKL  VN+R +   + E   SKD+      
Sbjct: 352 GCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLATVNTRVDF--SIESLISKDMFQSNNS 409

Query: 219 IAGVIY--ESQAARGYAQGSHPG-WLHMQIGGG 248
           +A  I+  +S A   Y Q       +H  I  G
Sbjct: 410 LAHPIFPLDSSAPSYYGQQQQQNPAIHNNISNG 442


>Medtr7g053410.1 | BHLH transcription factor | HC |
           chr7:18808902-18812670 | 20130731
          Length = 517

 Score =  160 bits (406), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 125/213 (58%), Gaps = 12/213 (5%)

Query: 42  RNHGSRIKMKNNNDSTTSEDDCSKNDSGNKRIRLXXXXXXXXXXXXXXLKAA-EASSVAG 100
           R   S+ K K  + S+     C   DS  KR++               +KA  E+     
Sbjct: 236 RKVSSKGKTKETSTSSNPPMACEAEDSNAKRMK----TNEGEKIENGKVKAEDESKGGTN 291

Query: 101 SNNSDEQSTKPSESEPPK--QDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVP 158
           SNN  ++    S S+PP+  +DYIHVRARRGQATDSHS+AER RREKISERMK+LQDLVP
Sbjct: 292 SNNGGDEKQNKSNSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 351

Query: 159 GCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPSKDVVTQPFD 218
           GCNK+ GKAL+LDEIINY+QSLQ QVEFLSMKL  VN+R +   + E   SKD+      
Sbjct: 352 GCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLATVNTRVDF--SIESLISKDMFQSNNS 409

Query: 219 IAGVIY--ESQAARGYAQGSHPG-WLHMQIGGG 248
           +A  I+  +S A   Y Q       +H  I  G
Sbjct: 410 LAHPIFPLDSSAPSYYGQQQQQNPAIHNNISNG 442


>Medtr8g012290.1 | BHLH transcription factor | HC |
           chr8:3449775-3453461 | 20130731
          Length = 497

 Score =  158 bits (399), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 74/103 (71%), Positives = 90/103 (87%), Gaps = 2/103 (1%)

Query: 100 GSNNSDEQSTKPSESEPP--KQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLV 157
           G+ N+ E+    S+S+PP  ++DYIHVRARRGQATDSHS+AER RREKISERMK+LQDLV
Sbjct: 265 GTPNAGEEKQNKSDSKPPEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLV 324

Query: 158 PGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANL 200
           PGCNK+ GKAL+LDEIINY+QSLQ QVEFLSMKL +VN++ +L
Sbjct: 325 PGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTKMDL 367


>Medtr8g012290.2 | BHLH transcription factor | HC |
           chr8:3449797-3453478 | 20130731
          Length = 498

 Score =  158 bits (399), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 74/103 (71%), Positives = 90/103 (87%), Gaps = 2/103 (1%)

Query: 100 GSNNSDEQSTKPSESEPP--KQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLV 157
           G+ N+ E+    S+S+PP  ++DYIHVRARRGQATDSHS+AER RREKISERMK+LQDLV
Sbjct: 265 GTPNAGEEKQNKSDSKPPEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLV 324

Query: 158 PGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANL 200
           PGCNK+ GKAL+LDEIINY+QSLQ QVEFLSMKL +VN++ +L
Sbjct: 325 PGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTKMDL 367


>Medtr4g070320.1 | transcription factor | HC |
           chr4:26483456-26485783 | 20130731
          Length = 344

 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/134 (61%), Positives = 100/134 (74%), Gaps = 6/134 (4%)

Query: 90  LKAAEASSVAGSNNSDE----QSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREK 145
           +K  + + +    N D+    +++K SE +  K DYIHVRARRGQATDSHS+AER RREK
Sbjct: 105 IKGNKNTKLKNRENCDDVGSKENSKGSEIQNHKPDYIHVRARRGQATDSHSLAERVRREK 164

Query: 146 ISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNE 205
           ISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQ QVEFLSMKL AVN R + N  +E
Sbjct: 165 ISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN-IDE 223

Query: 206 GFPSKDVVTQPFDI 219
            F +K+V TQ F +
Sbjct: 224 LF-AKEVFTQNFQM 236


>Medtr5g048860.7 | BHLH transcription factor | HC |
           chr5:21359767-21356247 | 20130731
          Length = 558

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 12/126 (9%)

Query: 90  LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISER 149
           +KA+  ++  GS NSD          PPK++YIHVRARRGQAT+SHS+AER RREKISER
Sbjct: 341 IKASGKNAKQGSQNSD----------PPKEEYIHVRARRGQATNSHSLAERVRREKISER 390

Query: 150 MKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPS 209
           MK LQ+LVPGC+K+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN R + N   E   +
Sbjct: 391 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI--ESLLA 448

Query: 210 KDVVTQ 215
           KDV+ Q
Sbjct: 449 KDVLHQ 454


>Medtr5g048860.6 | BHLH transcription factor | HC |
           chr5:21359767-21356205 | 20130731
          Length = 558

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 12/126 (9%)

Query: 90  LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISER 149
           +KA+  ++  GS NSD          PPK++YIHVRARRGQAT+SHS+AER RREKISER
Sbjct: 341 IKASGKNAKQGSQNSD----------PPKEEYIHVRARRGQATNSHSLAERVRREKISER 390

Query: 150 MKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPS 209
           MK LQ+LVPGC+K+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN R + N   E   +
Sbjct: 391 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI--ESLLA 448

Query: 210 KDVVTQ 215
           KDV+ Q
Sbjct: 449 KDVLHQ 454


>Medtr5g048860.5 | BHLH transcription factor | HC |
           chr5:21359767-21356205 | 20130731
          Length = 558

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 12/126 (9%)

Query: 90  LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISER 149
           +KA+  ++  GS NSD          PPK++YIHVRARRGQAT+SHS+AER RREKISER
Sbjct: 341 IKASGKNAKQGSQNSD----------PPKEEYIHVRARRGQATNSHSLAERVRREKISER 390

Query: 150 MKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPS 209
           MK LQ+LVPGC+K+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN R + N   E   +
Sbjct: 391 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI--ESLLA 448

Query: 210 KDVVTQ 215
           KDV+ Q
Sbjct: 449 KDVLHQ 454


>Medtr5g048860.1 | BHLH transcription factor | HC |
           chr5:21359821-21356205 | 20130731
          Length = 558

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 12/126 (9%)

Query: 90  LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISER 149
           +KA+  ++  GS NSD          PPK++YIHVRARRGQAT+SHS+AER RREKISER
Sbjct: 341 IKASGKNAKQGSQNSD----------PPKEEYIHVRARRGQATNSHSLAERVRREKISER 390

Query: 150 MKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPS 209
           MK LQ+LVPGC+K+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN R + N   E   +
Sbjct: 391 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI--ESLLA 448

Query: 210 KDVVTQ 215
           KDV+ Q
Sbjct: 449 KDVLHQ 454


>Medtr5g048860.3 | BHLH transcription factor | HC |
           chr5:21360103-21356247 | 20130731
          Length = 558

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 12/126 (9%)

Query: 90  LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISER 149
           +KA+  ++  GS NSD          PPK++YIHVRARRGQAT+SHS+AER RREKISER
Sbjct: 341 IKASGKNAKQGSQNSD----------PPKEEYIHVRARRGQATNSHSLAERVRREKISER 390

Query: 150 MKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPS 209
           MK LQ+LVPGC+K+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN R + N   E   +
Sbjct: 391 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI--ESLLA 448

Query: 210 KDVVTQ 215
           KDV+ Q
Sbjct: 449 KDVLHQ 454


>Medtr5g048860.10 | BHLH transcription factor | HC |
           chr5:21360190-21356205 | 20130731
          Length = 558

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 12/126 (9%)

Query: 90  LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISER 149
           +KA+  ++  GS NSD          PPK++YIHVRARRGQAT+SHS+AER RREKISER
Sbjct: 341 IKASGKNAKQGSQNSD----------PPKEEYIHVRARRGQATNSHSLAERVRREKISER 390

Query: 150 MKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPS 209
           MK LQ+LVPGC+K+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN R + N   E   +
Sbjct: 391 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI--ESLLA 448

Query: 210 KDVVTQ 215
           KDV+ Q
Sbjct: 449 KDVLHQ 454


>Medtr5g048860.4 | BHLH transcription factor | HC |
           chr5:21360103-21356205 | 20130731
          Length = 558

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 12/126 (9%)

Query: 90  LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISER 149
           +KA+  ++  GS NSD          PPK++YIHVRARRGQAT+SHS+AER RREKISER
Sbjct: 341 IKASGKNAKQGSQNSD----------PPKEEYIHVRARRGQATNSHSLAERVRREKISER 390

Query: 150 MKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPS 209
           MK LQ+LVPGC+K+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN R + N   E   +
Sbjct: 391 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI--ESLLA 448

Query: 210 KDVVTQ 215
           KDV+ Q
Sbjct: 449 KDVLHQ 454


>Medtr5g048860.8 | BHLH transcription factor | HC |
           chr5:21359821-21356247 | 20130731
          Length = 558

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 12/126 (9%)

Query: 90  LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISER 149
           +KA+  ++  GS NSD          PPK++YIHVRARRGQAT+SHS+AER RREKISER
Sbjct: 341 IKASGKNAKQGSQNSD----------PPKEEYIHVRARRGQATNSHSLAERVRREKISER 390

Query: 150 MKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPS 209
           MK LQ+LVPGC+K+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN R + N   E   +
Sbjct: 391 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI--ESLLA 448

Query: 210 KDVVTQ 215
           KDV+ Q
Sbjct: 449 KDVLHQ 454


>Medtr5g048860.9 | BHLH transcription factor | HC |
           chr5:21360103-21356205 | 20130731
          Length = 558

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 12/126 (9%)

Query: 90  LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISER 149
           +KA+  ++  GS NSD          PPK++YIHVRARRGQAT+SHS+AER RREKISER
Sbjct: 341 IKASGKNAKQGSQNSD----------PPKEEYIHVRARRGQATNSHSLAERVRREKISER 390

Query: 150 MKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPS 209
           MK LQ+LVPGC+K+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN R + N   E   +
Sbjct: 391 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI--ESLLA 448

Query: 210 KDVVTQ 215
           KDV+ Q
Sbjct: 449 KDVLHQ 454


>Medtr5g048860.2 | BHLH transcription factor | HC |
           chr5:21360103-21356247 | 20130731
          Length = 558

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 12/126 (9%)

Query: 90  LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISER 149
           +KA+  ++  GS NSD          PPK++YIHVRARRGQAT+SHS+AER RREKISER
Sbjct: 341 IKASGKNAKQGSQNSD----------PPKEEYIHVRARRGQATNSHSLAERVRREKISER 390

Query: 150 MKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPS 209
           MK LQ+LVPGC+K+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN R + N   E   +
Sbjct: 391 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI--ESLLA 448

Query: 210 KDVVTQ 215
           KDV+ Q
Sbjct: 449 KDVLHQ 454


>Medtr8g065740.1 | transcription factor | HC |
           chr8:27327298-27331635 | 20130731
          Length = 467

 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/133 (57%), Positives = 94/133 (70%), Gaps = 6/133 (4%)

Query: 114 SEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEI 173
           S+PP + Y+HVRARRGQAT+SHS+AER RREKISERMK LQDLVPGCNK+ GKA++LDEI
Sbjct: 295 SDPPNEGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 354

Query: 174 INYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPSKDVVT-QPFDIAGVIYESQAARGY 232
           INY+QSLQ QVEFLSMKL  VN   + N   E    KD++  QP   + + +  +    +
Sbjct: 355 INYVQSLQQQVEFLSMKLATVNPHVDFN--MERLLPKDILQHQPGPSSALGFLREMPMAF 412

Query: 233 AQGSH---PGWLH 242
              SH   PG +H
Sbjct: 413 PPLSHSYQPGLIH 425


>Medtr3g116770.1 | BHLH transcription factor | HC |
           chr3:54614928-54618490 | 20130731
          Length = 397

 Score =  149 bits (376), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/216 (43%), Positives = 124/216 (57%), Gaps = 24/216 (11%)

Query: 6   INDSTFSSAFALAEIWPRPG------GGADEHSTVTQLTAAARNHGSRIKMKNNNDSTTS 59
           +  S+ S  F+   + P P        G D+ ++  +  A   +H S++K+         
Sbjct: 81  VTSSSISRTFSCPPLLPDPKLIHSSIAGKDKDNSSKKRKAEKSHHNSKLKV------VVG 134

Query: 60  EDDCSKNDSGNKRIRLXXXXXXXXXXXXXXLKAAEASSVAGSNNSDEQSTKPSESEPPKQ 119
           E +    D   KRI++               K    + VA   ++ ++++K S+ +  K 
Sbjct: 135 EIEIENKD---KRIKIGSEDGESKITGNPNTKK---NCVAEDTSNSKENSKVSDVQ--KT 186

Query: 120 DYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQS 179
           DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QS
Sbjct: 187 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 246

Query: 180 LQHQVEFLSMKLEAVNSRANLNPTN----EGFPSKD 211
           LQ QVEFLSMKL  VN R + N  +    E FP+ D
Sbjct: 247 LQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPNCD 282


>Medtr3g116770.2 | BHLH transcription factor | HC |
           chr3:54614928-54618493 | 20130731
          Length = 398

 Score =  149 bits (376), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/216 (43%), Positives = 124/216 (57%), Gaps = 24/216 (11%)

Query: 6   INDSTFSSAFALAEIWPRPG------GGADEHSTVTQLTAAARNHGSRIKMKNNNDSTTS 59
           +  S+ S  F+   + P P        G D+ ++  +  A   +H S++K+         
Sbjct: 81  VTSSSISRTFSCPPLLPDPKLIHSSIAGKDKDNSSKKRKAEKSHHNSKLKV------VVG 134

Query: 60  EDDCSKNDSGNKRIRLXXXXXXXXXXXXXXLKAAEASSVAGSNNSDEQSTKPSESEPPKQ 119
           E +    D   KRI++               K    + VA   ++ ++++K S+ +  K 
Sbjct: 135 EIEIENKD---KRIKIGSEDGESKITGNPNTKK---NCVAEDTSNSKENSKVSDVQ--KT 186

Query: 120 DYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQS 179
           DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QS
Sbjct: 187 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 246

Query: 180 LQHQVEFLSMKLEAVNSRANLNPTN----EGFPSKD 211
           LQ QVEFLSMKL  VN R + N  +    E FP+ D
Sbjct: 247 LQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPNCD 282


>Medtr1g017350.3 | transcription factor | HC | chr1:4807563-4800948
           | 20130731
          Length = 421

 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/113 (62%), Positives = 87/113 (76%), Gaps = 7/113 (6%)

Query: 106 EQSTKPSESEPP-----KQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGC 160
           EQS K ++   P     K ++IHVRARRGQAT+SHS+AER RREKISERM++LQ+LVPGC
Sbjct: 237 EQSGKQAKDNSPSGDASKDNFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGC 296

Query: 161 NKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPSKDVV 213
           NK+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN   N +   E   SKD++
Sbjct: 297 NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDV--ERLLSKDIL 347


>Medtr1g017350.2 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 421

 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/113 (62%), Positives = 87/113 (76%), Gaps = 7/113 (6%)

Query: 106 EQSTKPSESEPP-----KQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGC 160
           EQS K ++   P     K ++IHVRARRGQAT+SHS+AER RREKISERM++LQ+LVPGC
Sbjct: 237 EQSGKQAKDNSPSGDASKDNFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGC 296

Query: 161 NKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPSKDVV 213
           NK+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN   N +   E   SKD++
Sbjct: 297 NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDV--ERLLSKDIL 347


>Medtr1g017350.1 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 426

 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/113 (62%), Positives = 87/113 (76%), Gaps = 7/113 (6%)

Query: 106 EQSTKPSESEPP-----KQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGC 160
           EQS K ++   P     K ++IHVRARRGQAT+SHS+AER RREKISERM++LQ+LVPGC
Sbjct: 237 EQSGKQAKDNSPSGDASKDNFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGC 296

Query: 161 NKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPSKDVV 213
           NK+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN   N +   E   SKD++
Sbjct: 297 NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDV--ERLLSKDIL 347


>Medtr1g017350.5 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 418

 Score =  141 bits (355), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 67/101 (66%), Positives = 81/101 (80%), Gaps = 5/101 (4%)

Query: 106 EQSTKPSESEPP-----KQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGC 160
           EQS K ++   P     K ++IHVRARRGQAT+SHS+AER RREKISERM++LQ+LVPGC
Sbjct: 237 EQSGKQAKDNSPSGDASKDNFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGC 296

Query: 161 NKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLN 201
           NK+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN   N +
Sbjct: 297 NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFD 337


>Medtr1g017350.4 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 423

 Score =  141 bits (355), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 67/101 (66%), Positives = 81/101 (80%), Gaps = 5/101 (4%)

Query: 106 EQSTKPSESEPP-----KQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGC 160
           EQS K ++   P     K ++IHVRARRGQAT+SHS+AER RREKISERM++LQ+LVPGC
Sbjct: 237 EQSGKQAKDNSPSGDASKDNFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGC 296

Query: 161 NKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLN 201
           NK+ GKA++LDEIINY+QSLQ QVEFLSMKL  VN   N +
Sbjct: 297 NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFD 337


>Medtr8g099880.1 | basic helix loop helix protein BHLH8 | HC |
           chr8:40310788-40313947 | 20130731
          Length = 327

 Score =  140 bits (352), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 64/75 (85%), Positives = 71/75 (94%)

Query: 121 YIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSL 180
           YIHVRARRGQATDSHS+AER RREKISERMKILQ LVPGC+++ GKALVLDEIINY+QSL
Sbjct: 142 YIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSL 201

Query: 181 QHQVEFLSMKLEAVN 195
           Q+QVEFLSMKL +VN
Sbjct: 202 QNQVEFLSMKLASVN 216


>Medtr3g498825.1 | transcription factor bHLH137 | HC |
           chr3:45174959-45177533 | 20130731
          Length = 330

 Score =  139 bits (349), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 66/81 (81%), Positives = 73/81 (90%), Gaps = 1/81 (1%)

Query: 115 EPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEII 174
           EPP   YIHVRARRGQATDSHS+AER RREKISERMK LQ LVPGC+K+ GKAL+LDEII
Sbjct: 139 EPPT-GYIHVRARRGQATDSHSLAERVRREKISERMKKLQQLVPGCDKVTGKALMLDEII 197

Query: 175 NYIQSLQHQVEFLSMKLEAVN 195
           NY+QSLQ+QVEFLSMKL +VN
Sbjct: 198 NYVQSLQNQVEFLSMKLTSVN 218


>Medtr1g059270.2 | transcription factor | HC |
           chr1:21508218-21513937 | 20130731
          Length = 252

 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 60/81 (74%), Positives = 71/81 (87%)

Query: 121 YIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSL 180
           Y+HVR RRGQATDSHS+AERARREKI+ RMK+LQ+LVPGCNK+ G ALVLD+IIN++QSL
Sbjct: 157 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 216

Query: 181 QHQVEFLSMKLEAVNSRANLN 201
           QH+VE LSMKL AVN   + N
Sbjct: 217 QHEVEILSMKLAAVNPIIDFN 237


>Medtr1g059270.1 | transcription factor | HC |
           chr1:21508003-21513939 | 20130731
          Length = 326

 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 60/81 (74%), Positives = 71/81 (87%)

Query: 121 YIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSL 180
           Y+HVR RRGQATDSHS+AERARREKI+ RMK+LQ+LVPGCNK+ G ALVLD+IIN++QSL
Sbjct: 157 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 216

Query: 181 QHQVEFLSMKLEAVNSRANLN 201
           QH+VE LSMKL AVN   + N
Sbjct: 217 QHEVEILSMKLAAVNPIIDFN 237


>Medtr7g092510.1 | transcription factor | HC |
           chr7:36672741-36665752 | 20130731
          Length = 340

 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/84 (72%), Positives = 71/84 (84%)

Query: 118 KQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYI 177
           K  Y+HVR RRGQATDSHS+AERARREKI+ RMK+LQ+LVPGC K+ G ALVLDEIIN++
Sbjct: 167 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHV 226

Query: 178 QSLQHQVEFLSMKLEAVNSRANLN 201
           Q+LQ QVE LSMKL AVN R + N
Sbjct: 227 QTLQRQVEILSMKLAAVNPRIDFN 250


>Medtr6g084120.1 | transcription factor | HC |
           chr6:31420208-31422275 | 20130731
          Length = 263

 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 67/94 (71%), Gaps = 10/94 (10%)

Query: 109 TKPSESEPPK-QDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKA 167
            K  E+E  K ++ +HVRARRGQATDSHS+AER RR KI+E++K LQ++VPGC K +G A
Sbjct: 139 VKSYETEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMA 198

Query: 168 LVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLN 201
           ++LDEIINY         FLS+KL A ++  + N
Sbjct: 199 VMLDEIINY---------FLSLKLTAASTYYDFN 223


>Medtr4g131160.1 | BHLH transcription factor | HC |
           chr4:54719229-54715702 | 20130731
          Length = 400

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 56/73 (76%), Gaps = 1/73 (1%)

Query: 117 PKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINY 176
           P Q    VRARRGQATD HSIAER RRE+I+ERMK LQ+LVP  NK   KA +LDEII+Y
Sbjct: 189 PAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDY 247

Query: 177 IQSLQHQVEFLSM 189
           ++ LQ QV+ LSM
Sbjct: 248 VKFLQVQVKVLSM 260


>Medtr4g131160.2 | BHLH transcription factor | HC |
           chr4:54719229-54715448 | 20130731
          Length = 403

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 56/73 (76%), Gaps = 1/73 (1%)

Query: 117 PKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINY 176
           P Q    VRARRGQATD HSIAER RRE+I+ERMK LQ+LVP  NK   KA +LDEII+Y
Sbjct: 192 PAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDY 250

Query: 177 IQSLQHQVEFLSM 189
           ++ LQ QV+ LSM
Sbjct: 251 VKFLQVQVKVLSM 263


>Medtr1g080890.1 | transcription factor UNE12-like protein | HC |
           chr1:36000358-35993128 | 20130731
          Length = 355

 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 1/66 (1%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           VRARRGQATD HSIAER RRE+I+ERMK LQ+LVP  NK   KA +LDEI++Y++ L+ Q
Sbjct: 193 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDKAAMLDEIVDYVKFLRLQ 251

Query: 184 VEFLSM 189
           V+ LSM
Sbjct: 252 VKVLSM 257


>Medtr4g107320.1 | basic helix loop helix (bHLH) DNA-binding
           superfamily protein, putative | LC |
           chr4:44354237-44353384 | 20130731
          Length = 141

 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 6/76 (7%)

Query: 142 RREKISERMKILQDLVPGCNKM-IGKALVLDEIINYIQSLQHQVEF----LSMKL-EAVN 195
           RREKISER+K+L+DLVP   K+ IGK L+L EIINYIQSLQHQVE      S+ L E +N
Sbjct: 60  RREKISERIKMLEDLVPRYTKLVIGKTLMLYEIINYIQSLQHQVEIHAYVFSIFLHERIN 119

Query: 196 SRANLNPTNEGFPSKD 211
              N++ + + FPSKD
Sbjct: 120 FILNMHSSIDCFPSKD 135


>Medtr4g065870.1 | transcription factor bHLH122-like protein | HC |
           chr4:24793938-24798773 | 20130731
          Length = 433

 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 46/65 (70%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   SIAER RR KISERM+ LQDLVP  +K    + +LD  + YI+ LQ+Q
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414

Query: 184 VEFLS 188
           VE LS
Sbjct: 415 VETLS 419


>Medtr1g069155.1 | transcription factor | HC |
           chr1:29736862-29728341 | 20130731
          Length = 534

 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 126 ARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVE 185
           A+R +A + H+++ER RR++I+E+MK LQ+L+P CNK   KA +LDE I Y++SLQ QV+
Sbjct: 319 AKRSRAAEVHNLSERKRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 377

Query: 186 FLSM 189
            +SM
Sbjct: 378 MMSM 381


>Medtr4g065870.3 | transcription factor bHLH122-like protein | HC |
           chr4:24793938-24798773 | 20130731
          Length = 416

 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 44/62 (70%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   SIAER RR KISERM+ LQDLVP  +K    + +LD  + YI+ LQ+Q
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414

Query: 184 VE 185
           VE
Sbjct: 415 VE 416


>Medtr1g084980.1 | phytochrome-interacting factor 3.1 | HC |
           chr1:37932621-37937084 | 20130731
          Length = 721

 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 51/64 (79%), Gaps = 1/64 (1%)

Query: 126 ARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVE 185
           ++R +A + H+++ER RR++I+E+M+ LQ+L+P CNK + KA +LDE I Y+++LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 522

Query: 186 FLSM 189
            +SM
Sbjct: 523 MMSM 526


>Medtr2g098310.4 | transcription factor bHLH122-like protein | HC |
           chr2:42020814-42024550 | 20130731
          Length = 407

 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 46/67 (68%)

Query: 122 IHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQ 181
           + +RA+RG AT   SIAER RR KISERM+ LQDLVP  +K    A +LD  ++YI+ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389

Query: 182 HQVEFLS 188
            Q + +S
Sbjct: 390 KQAQVIS 396


>Medtr1g070870.2 | basic helix loop helix protein BHLH4 | HC |
           chr1:31384448-31380418 | 20130731
          Length = 285

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 2/82 (2%)

Query: 108 STKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKA 167
           +T P+  +PP      VRARRGQATD HSIAER RRE+I+ER++ LQ+LVP  NK   +A
Sbjct: 108 TTVPAAPQPPAM-RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRA 165

Query: 168 LVLDEIINYIQSLQHQVEFLSM 189
            +LDEI++Y++ L+ QV+ LSM
Sbjct: 166 AMLDEIVDYVKFLRLQVKVLSM 187


>Medtr1g070870.1 | basic helix loop helix protein BHLH4 | HC |
           chr1:31384531-31380237 | 20130731
          Length = 282

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 2/82 (2%)

Query: 108 STKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKA 167
           +T P+  +PP      VRARRGQATD HSIAER RRE+I+ER++ LQ+LVP  NK   +A
Sbjct: 105 TTVPAAPQPPAM-RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRA 162

Query: 168 LVLDEIINYIQSLQHQVEFLSM 189
            +LDEI++Y++ L+ QV+ LSM
Sbjct: 163 AMLDEIVDYVKFLRLQVKVLSM 184


>Medtr2g098310.1 | transcription factor bHLH122-like protein | HC |
           chr2:42020814-42024550 | 20130731
          Length = 412

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 45/66 (68%)

Query: 122 IHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQ 181
           + +RA+RG AT   SIAER RR KISERM+ LQDLVP  +K    A +LD  ++YI+ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389

Query: 182 HQVEFL 187
            Q + L
Sbjct: 390 KQAQKL 395


>Medtr1g052470.1 | transcription factor bHLH122-like protein | HC |
           chr1:21321554-21325547 | 20130731
          Length = 382

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 47/67 (70%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   SIAER RR KISERM+ LQ+LVP  +K    + +LD  ++YI++LQ Q
Sbjct: 298 IRAKRGCATHPRSIAERLRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKNLQKQ 357

Query: 184 VEFLSMK 190
            + LS K
Sbjct: 358 FKSLSDK 364


>Medtr4g033295.1 | transcription factor | HC |
           chr4:11668601-11664851 | 20130731
          Length = 194

 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 47/65 (72%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   SIAER RR +IS+R++ LQ+LVP  +K    A +LDE + Y++ LQ+Q
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177

Query: 184 VEFLS 188
           +E LS
Sbjct: 178 IEELS 182


>Medtr4g033295.2 | transcription factor | HC |
           chr4:11668601-11664993 | 20130731
          Length = 184

 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 1/67 (1%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   SIAER RR +IS+R++ LQ+LVP  +K    A +LDE + Y++ LQ+Q
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177

Query: 184 VE-FLSM 189
           +E F S+
Sbjct: 178 IEVFFSV 184


>Medtr7g099540.2 | transcription factor | HC |
           chr7:39933891-39938353 | 20130731
          Length = 461

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)

Query: 127 RRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEF 186
           +R +A + H+++ER RR++I+E+MK LQ+L+P  NK   KA +LDE I+Y++SLQ QV+ 
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAIDYLKSLQLQVQM 313

Query: 187 LSM 189
           +SM
Sbjct: 314 MSM 316


>Medtr7g092540.1 | transcription factor bHLH122-like protein | HC |
           chr7:36700423-36703589 | 20130731
          Length = 319

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 47/74 (63%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   S+AER RR +ISERM+ LQ++VP  +K    + +LD  + YI+ LQ Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302

Query: 184 VEFLSMKLEAVNSR 197
           ++ +S K      R
Sbjct: 303 LKTMSAKRAKCRCR 316


>Medtr1g018090.1 | helix loop helix DNA-binding domain protein | LC
           | chr1:5273706-5271864 | 20130731
          Length = 366

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
            RA RG ATD  S+  R RRE+I+ER+++LQ+LVP   K +  + +L+E +NY++ LQ Q
Sbjct: 274 TRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTK-VDISTMLEEAVNYVKFLQTQ 332

Query: 184 VEFLS 188
           ++ LS
Sbjct: 333 IKLLS 337


>Medtr3g028520.2 | transcription factor bHLH122-like protein | HC |
           chr3:9050886-9047555 | 20130731
          Length = 406

 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 43/65 (66%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   SIAER RR +IS+R+K LQ L P  +K    A +LD  + YI+ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381

Query: 184 VEFLS 188
           V+ L+
Sbjct: 382 VQILT 386


>Medtr3g028520.1 | transcription factor bHLH122-like protein | HC |
           chr3:9050886-9047555 | 20130731
          Length = 406

 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 43/65 (66%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   SIAER RR +IS+R+K LQ L P  +K    A +LD  + YI+ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381

Query: 184 VEFLS 188
           V+ L+
Sbjct: 382 VQILT 386


>Medtr3g027650.1 | transcription factor bHLH122-like protein | HC |
           chr3:8699084-8695587 | 20130731
          Length = 406

 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 43/65 (66%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   SIAER RR +IS+R+K LQ L P  +K    A +LD  + YI+ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381

Query: 184 VEFLS 188
           V+ L+
Sbjct: 382 VQILT 386


>Medtr1g116790.1 | transcription factor | HC |
           chr1:52858896-52855667 | 20130731
          Length = 343

 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%)

Query: 111 PSESEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVL 170
           P +S P K     +RA+RG AT   SIAER RR +IS ++K LQDLVP  +K    + +L
Sbjct: 257 PQDSVPCK-----IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDML 311

Query: 171 DEIINYIQSLQHQVEFLSMKLE 192
           D  + +I+ LQ QV+ L   LE
Sbjct: 312 DLAVQHIKGLQTQVQKLHEDLE 333


>Medtr8g036235.1 | transcription factor bHLH122-like protein | HC |
           chr8:13412224-13407513 | 20130731
          Length = 391

 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 44/65 (67%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   SIAER RR +IS R+K LQDL P  +K    A +LDE + YI+ L+ Q
Sbjct: 316 IRAKRGFATHPRSIAERERRIRISARIKKLQDLFPNADKQNSTADMLDEAVEYIKDLRKQ 375

Query: 184 VEFLS 188
           ++ L+
Sbjct: 376 LKILT 380


>Medtr7g092540.2 | transcription factor bHLH122-like protein | HC |
           chr7:36700423-36703589 | 20130731
          Length = 307

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 45/65 (69%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   S+AER RR +ISERM+ LQ++VP  +K    + +LD  + YI+ LQ Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302

Query: 184 VEFLS 188
           ++ L+
Sbjct: 303 LKVLN 307


>Medtr3g101810.1 | transcription factor | HC |
           chr3:46898499-46899776 | 20130731
          Length = 271

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 7/98 (7%)

Query: 111 PSESEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVL 170
           P   +PPK+  + +      + D  SIA R RRE+ISE+++ILQ +VPG  KM   A +L
Sbjct: 164 PESVKPPKRRNVKI------SKDPQSIAARHRRERISEKIRILQRMVPGGTKM-DTASML 216

Query: 171 DEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFP 208
           DE I+Y++ L+ Q++ L  +    NS   +  +  GFP
Sbjct: 217 DEAIHYVKFLKTQLKSLQERASGANSNRTVAGSGLGFP 254


>Medtr5g005110.1 | transcription factor | HC | chr5:277903-279787 |
           20130731
          Length = 331

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 125 RARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQV 184
           R+ RG ATD  S+  R RRE+I+ER+KILQ+LVP   K +  + +L+E + Y++ LQ Q+
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 283

Query: 185 EFLS 188
           + LS
Sbjct: 284 KLLS 287


>Medtr1g019240.1 | helix loop helix DNA-binding domain protein | HC
           | chr1:5755377-5757645 | 20130731
          Length = 267

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 60/93 (64%), Gaps = 6/93 (6%)

Query: 99  AGSNNSDEQSTKPS-ESEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLV 157
           + S  +DE S  PS ++ PP +      ++R +A + H+++E+ RR KI+E++K LQ+L+
Sbjct: 63  SSSAQNDEGSELPSSKAAPPPRS----SSKRSRAAEFHNLSEKRRRSKINEKLKALQNLI 118

Query: 158 PGCNKMIGKALVLDEIINYIQSLQHQVEFLSMK 190
           P  NK   KA +LDE I Y++ LQ QV+ L ++
Sbjct: 119 PNSNK-TDKASMLDEAIEYLKQLQLQVQMLMVR 150


>Medtr3g027650.3 | transcription factor bHLH122-like protein | HC |
           chr3:8699084-8695587 | 20130731
          Length = 401

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 41/62 (66%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQ 183
           +RA+RG AT   SIAER RR +IS+R+K LQ L P  +K    A +LD  + YI+ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381

Query: 184 VE 185
           V+
Sbjct: 382 VQ 383


>Medtr7g099540.1 | transcription factor | HC |
           chr7:39933891-39938353 | 20130731
          Length = 467

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 48/63 (76%), Gaps = 1/63 (1%)

Query: 127 RRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEF 186
           +R +A + H+++ER RR++I+E+MK LQ+L+P  NK   KA +LDE I+Y++SLQ QV+ 
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAIDYLKSLQLQVQR 313

Query: 187 LSM 189
           + +
Sbjct: 314 VQL 316


>Medtr7g110810.1 | helix loop helix DNA-binding domain protein | HC
           | chr7:45421992-45424245 | 20130731
          Length = 373

 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 46/55 (83%), Gaps = 1/55 (1%)

Query: 135 HSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSM 189
           H+++ER RR+KI+E+++ L++L+P CNKM  KA +LD+ I+Y+++L+ Q++ +SM
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNKM-DKASMLDDAIDYLKTLKLQLQIMSM 266


>Medtr3g103030.1 | transcription factor | HC |
           chr3:47454820-47457040 | 20130731
          Length = 321

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)

Query: 125 RARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQV 184
           RA RG ATD  S+  R RREKI+ER++ LQ+LVP   K +  + +L++ I Y++ LQ Q+
Sbjct: 230 RASRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIQYVKFLQLQI 288

Query: 185 EFLS 188
           + LS
Sbjct: 289 KLLS 292


>Medtr7g111320.1 | phytochrome-interacting factor 3.1 | HC |
           chr7:45695946-45691940 | 20130731
          Length = 691

 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 51/64 (79%), Gaps = 1/64 (1%)

Query: 126 ARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVE 185
           +++ ++T+ H+++ER RR++I+ERM+ LQ+L+P CNK   KA +LDE I Y++SLQ Q++
Sbjct: 434 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNK-ADKASMLDEAIEYLKSLQLQLQ 492

Query: 186 FLSM 189
            +SM
Sbjct: 493 IMSM 496


>Medtr3g449770.1 | transcription factor | HC |
           chr3:16987989-16990900 | 20130731
          Length = 511

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)

Query: 126 ARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVE 185
           ARR +A + H+++ER RR++I+E+MK LQ L+P  +K   KA +L+E I Y++SLQ Q++
Sbjct: 311 ARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSK-TDKASMLEEAIEYLKSLQLQLQ 369

Query: 186 FLSM 189
            + M
Sbjct: 370 VMWM 373


>Medtr1g106470.1 | transcription factor | HC |
           chr1:48147124-48145297 | 20130731
          Length = 287

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 2/81 (2%)

Query: 108 STKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKA 167
           S  P E E PK      RA    ATD+ SI  R RRE+I+ER++ILQ LVP   K +  +
Sbjct: 181 SLSPKEHEAPKLGR-KSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTK-VDIS 238

Query: 168 LVLDEIINYIQSLQHQVEFLS 188
            +L+E + Y++ LQ Q++ LS
Sbjct: 239 TMLEEAVQYVKFLQLQIKLLS 259


>Medtr2g098310.5 | transcription factor bHLH122-like protein | HC |
           chr2:42020814-42024550 | 20130731
          Length = 447

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 6/69 (8%)

Query: 122 IHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNK----MIGKAL--VLDEIIN 175
           + +RA+RG AT   SIAER RR KISERM+ LQDLVP  +K    MIG  +  V +  + 
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKVLCFMIGFNICKVSNHTLI 389

Query: 176 YIQSLQHQV 184
           Y+ +L++ V
Sbjct: 390 YVNALRYNV 398


>Medtr5g017040.1 | helix loop helix DNA-binding domain protein | HC
           | chr5:6175718-6178846 | 20130731
          Length = 344

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)

Query: 135 HSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMK 190
           H+++E+ RR +I+E+MK LQ+L+P  NK   KA +LDE I Y++ LQ QV+ LS++
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSLR 170


>Medtr5g048350.1 | transcription factor BIM2-like protein | HC |
           chr5:21194939-21186807 | 20130731
          Length = 335

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 7/66 (10%)

Query: 127 RRGQATDS-------HSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQS 179
           + G+ATD        HS+ E+ RR KI+ER +IL+DL+P C++    A  L E+I Y+Q 
Sbjct: 34  KDGKATDKASVIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQY 93

Query: 180 LQHQVE 185
           LQ +V+
Sbjct: 94  LQERVQ 99


>Medtr4g065870.2 | transcription factor bHLH122-like protein | HC |
           chr4:24793938-24798773 | 20130731
          Length = 414

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 124 VRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKM-IGKALVLDEIINYIQ 178
           +RA+RG AT   SIAER RR KISERM+ LQDLVP  +K+ I     L  + NY +
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKVNILTCGTLTNLHNYFE 410


>Medtr2g098310.2 | transcription factor bHLH122-like protein | HC |
           chr2:42020943-42024319 | 20130731
          Length = 411

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 7/83 (8%)

Query: 122 IHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQ 181
           + +RA+RG AT   SIAER RR KISERM+ LQDLVP  +K+    L       +I S  
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKICWTWL-------WITSKT 382

Query: 182 HQVEFLSMKLEAVNSRANLNPTN 204
            + +  S K+   + RA+ + +N
Sbjct: 383 FKSKLRSFKIVKQSVRAHTSSSN 405


>Medtr8g093500.1 | basic helix loop helix (BHLH) DNA-binding family
           protein | HC | chr8:39073120-39074019 | 20130731
          Length = 275

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 133 DSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFL 187
           D  S+A R RRE+ISE+++ILQ LVPG  KM   A +LDE I Y++ L+ Q++ L
Sbjct: 123 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIKLL 176


>Medtr1g106460.1 | basic helix loop helix (BHLH) DNA-binding family
           protein | HC | chr1:48142311-48140254 | 20130731
          Length = 330

 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 125 RARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQV 184
           R   G A+D   +  + RRE+I+ER+KILQ LVP   K +  + +L+E + Y++ LQ Q+
Sbjct: 239 RCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTK-VDISTMLEEAVQYVKFLQVQI 297

Query: 185 EFLS 188
           + LS
Sbjct: 298 KLLS 301


>Medtr1g106480.1 | helix loop helix DNA-binding domain protein | HC
           | chr1:48151299-48150443 | 20130731
          Length = 157

 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)

Query: 91  KAAEASSVAGSNNSDEQSTKPSESEPPKQD--YIHVRARRGQATDSHSIAERARREKISE 148
           K    S       +D QS    +S+ P +D   + +  +   A   + I    RRE+I+E
Sbjct: 34  KLCRKSKAGSGPATDAQSIYLCKSKSPLKDISLVRIWIQVNYAESQYVIMILRRRERINE 93

Query: 149 RMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEA 193
           R++ILQ LVP   K +  + +L+E + Y++ LQ Q++ LSM + A
Sbjct: 94  RLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLLSMWMYA 137


>Medtr5g079500.1 | BHLH transcription factor, putative | HC |
           chr5:33988652-33990553 | 20130731
          Length = 311

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 41/56 (73%), Gaps = 1/56 (1%)

Query: 133 DSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLS 188
           D  S+A + RRE+ISER+KILQ+LVP  +K +    +L++ I+Y++ LQ QV+ L+
Sbjct: 227 DPQSVAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 281


>Medtr5g014600.1 | basic helix loop helix (bHLH) DNA-binding family
           protein | HC | chr5:4932337-4934396 | 20130731
          Length = 334

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query: 126 ARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVE 185
           AR  Q    H IAER RREKIS++   L  L+P   KM  KA VL + IN+++ LQ +V+
Sbjct: 144 ARNAQ---DHIIAERKRREKISQKFIALSALLPDLKKM-DKASVLGDAINHVKQLQEKVK 199

Query: 186 FLSMKLEAVNSRANLNPTNEGFPSKDVVTQPFDIAGVIYESQAARGYAQGSH 237
                LE  N + N+   +  +  K   T+ +     + E+ +  GY    H
Sbjct: 200 L----LEEKNQKNNVESVSMVYVEK---TKSYSSDEDVSETSSNSGYGNCCH 244


>Medtr4g092700.1 | helix loop helix DNA-binding domain protein | HC
           | chr4:36769079-36766426 | 20130731
          Length = 333

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 135 HSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFL 187
           H IAER RREK+S+R   L  LVPG  KM  K  VL + I Y++ LQ +V+ L
Sbjct: 159 HIIAERKRREKLSQRFIALSALVPGLQKM-DKVTVLGDAIKYLKKLQEKVKVL 210


>Medtr4g091910.1 | helix loop helix DNA-binding domain protein | LC
           | chr4:36467844-36466552 | 20130731
          Length = 210

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 138 AERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSR 197
            ER RREK++ R+ +L+ LVP    M  KA ++++ I Y   LQH+VE L+++L+ +  R
Sbjct: 51  TERKRREKLTSRLLVLRSLVPIITNM-NKASIIEDAITYTMKLQHEVESLTLELDGMEPR 109

Query: 198 --ANLNPTNEGFPSKDVVTQPFDIAGVIYESQAAR 230
                 P    F S D + +     G+  E Q A+
Sbjct: 110 REKRAEPKQREFSSVDEMNK----MGLQEEVQVAK 140


>Medtr4g097940.1 | basic helix loop helix (bHLH) DNA-binding family
           protein | HC | chr4:40442807-40439726 | 20130731
          Length = 328

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 130 QATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFL 187
           QA D H IAER RREK+S+R   L  ++PG  KM  KA +L++ I +++ LQ +V+ L
Sbjct: 152 QARD-HVIAERKRREKLSQRFIALSSILPGLKKM-DKATILEDAIKHMKQLQERVKTL 207


>Medtr7g069590.1 | helix loop helix DNA-binding domain protein | HC
           | chr7:25645518-25644662 | 20130731
          Length = 153

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 1/54 (1%)

Query: 131 ATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQV 184
           +TD  S+A R RR +IS+R KILQ ++PG +K+     +L+E I+Y++ L+ Q+
Sbjct: 33  STDPQSVAARERRHRISDRFKILQSMIPGGSKL-DTVSMLEEAIHYVKFLKKQI 85


>Medtr4g097950.1 | basic helix loop helix (bHLH) DNA-binding family
           protein | HC | chr4:40448486-40446827 | 20130731
          Length = 252

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 132 TDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFL 187
           T  H IAER RREKIS+    L  L+P   KM  KA VL + I Y++ L+ QV+ L
Sbjct: 68  TPDHIIAERIRREKISQLFIALSALIPNLKKM-DKASVLGDAIKYVKELKEQVKML 122


>Medtr1g084980.2 | phytochrome-interacting factor 3.1 | HC |
           chr1:37932621-37935547 | 20130731
          Length = 555

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 32/38 (84%)

Query: 126 ARRGQATDSHSIAERARREKISERMKILQDLVPGCNKM 163
           ++R +A + H+++ER RR++I+E+M+ LQ+L+P CNK+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV 501