Miyakogusa Predicted Gene

Lj1g3v0426800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0426800.1 Non Characterized Hit- tr|H0ZCM2|H0ZCM2_TAEGU
Uncharacterized protein (Fragment) OS=Taeniopygia gutt,33.14,6e-19,no
description,5-formyltetrahydrofolate cyclo-ligase-like domain;
5-FORMYLTETRAHYDROFOLATE CYCLO-LIG,CUFF.25854.1
         (273 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0168s0080.1 | 5-formyltetrahydrofolate cyclo-ligase | HC | ...   347   5e-96
Medtr0168s0080.2 | 5-formyltetrahydrofolate cyclo-ligase | HC | ...   327   8e-90

>Medtr0168s0080.1 | 5-formyltetrahydrofolate cyclo-ligase | HC |
           scaffold0168:24351-28303 | 20130731
          Length = 262

 Score =  347 bits (891), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 183/261 (70%), Positives = 204/261 (78%), Gaps = 5/261 (1%)

Query: 13  RAATKGV-ASLQLF-RRPCGQLKMXXXXXXXXXXHDDLDAIFKQKRILRTQVKKTLKSID 70
           RAA KGV  S QL+ ++P G L             D+LDAIFKQK+ LRTQV+KTLK+ID
Sbjct: 2   RAAAKGVLVSGQLYAQQPYGML--LRMTSTNCNTGDELDAIFKQKKALRTQVRKTLKAID 59

Query: 71  PSLRSQQDNAIQDIILGAPWFKSSARLCAYISCSALREVDTSKLLSEILQPSAATGGKKL 130
           PSLRSQQD AIQDII+GAPWFKSS  LCAYISCSALREVDTSKLLS ILQP  A G KKL
Sbjct: 60  PSLRSQQDKAIQDIIVGAPWFKSSRGLCAYISCSALREVDTSKLLSHILQPPPA-GDKKL 118

Query: 131 YVPRVEDKNSHMRMLNISRIDDLVANSMDILEPAPVDADGNAREDVMQAXXXXXXXXXXX 190
           YVPRVEDKNSHMRMLNISRIDDLVANSM+ILEP PVDADGNAR+DV+QA           
Sbjct: 119 YVPRVEDKNSHMRMLNISRIDDLVANSMNILEPTPVDADGNARQDVLQANDPVDIMLLPG 178

Query: 191 XAFDXXXXXXXXXXXYYDTFLESYQHLAKTRNWKQPLLVALSYSQQILDEGVIPMTSSDV 250
            AFD           YYDTFL++Y+ LA+TRNW QPLLVALSYSQQILD+GVIP+TS+D+
Sbjct: 179 LAFDKSGRRLGRGGGYYDTFLKNYRDLAETRNWTQPLLVALSYSQQILDDGVIPVTSTDI 238

Query: 251 PVDALVTPAGVIPISTEAFDR 271
           PVDALV+P GVIPIS+ AFDR
Sbjct: 239 PVDALVSPEGVIPISSAAFDR 259


>Medtr0168s0080.2 | 5-formyltetrahydrofolate cyclo-ligase | HC |
           scaffold0168:24458-28303 | 20130731
          Length = 253

 Score =  327 bits (838), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 176/261 (67%), Positives = 196/261 (75%), Gaps = 14/261 (5%)

Query: 13  RAATKGV-ASLQLF-RRPCGQLKMXXXXXXXXXXHDDLDAIFKQKRILRTQVKKTLKSID 70
           RAA KGV  S QL+ ++P G L             D+LDAIFKQK+ LRTQV+KTLK+ID
Sbjct: 2   RAAAKGVLVSGQLYAQQPYGML--LRMTSTNCNTGDELDAIFKQKKALRTQVRKTLKAID 59

Query: 71  PSLRSQQDNAIQDIILGAPWFKSSARLCAYISCSALREVDTSKLLSEILQPSAATGGKKL 130
           PSLRSQQ         GAPWFKSS  LCAYISCSALREVDTSKLLS ILQP  A G KKL
Sbjct: 60  PSLRSQQ---------GAPWFKSSRGLCAYISCSALREVDTSKLLSHILQPPPA-GDKKL 109

Query: 131 YVPRVEDKNSHMRMLNISRIDDLVANSMDILEPAPVDADGNAREDVMQAXXXXXXXXXXX 190
           YVPRVEDKNSHMRMLNISRIDDLVANSM+ILEP PVDADGNAR+DV+QA           
Sbjct: 110 YVPRVEDKNSHMRMLNISRIDDLVANSMNILEPTPVDADGNARQDVLQANDPVDIMLLPG 169

Query: 191 XAFDXXXXXXXXXXXYYDTFLESYQHLAKTRNWKQPLLVALSYSQQILDEGVIPMTSSDV 250
            AFD           YYDTFL++Y+ LA+TRNW QPLLVALSYSQQILD+GVIP+TS+D+
Sbjct: 170 LAFDKSGRRLGRGGGYYDTFLKNYRDLAETRNWTQPLLVALSYSQQILDDGVIPVTSTDI 229

Query: 251 PVDALVTPAGVIPISTEAFDR 271
           PVDALV+P GVIPIS+ AFDR
Sbjct: 230 PVDALVSPEGVIPISSAAFDR 250