Miyakogusa Predicted Gene

Lj1g3v0426760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0426760.1 Non Characterized Hit- tr|I1K1J8|I1K1J8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,84.78,0,CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P,NULL;
P-loop containing nucleoside triphosphate hyd,CUFF.25895.1
         (370 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g080150.1 | polynucleotide 5-hydroxyl-kinase NOL9-like pro...   508   e-144
Medtr8g080140.1 | polynucleotide 5-hydroxyl-kinase NOL9-like pro...   478   e-135
Medtr8g080140.2 | polynucleotide 5-hydroxyl-kinase NOL9-like pro...   478   e-135
Medtr1g116060.1 | Pre-mRNA cleavage complex II protein Clp1 | HC...    51   2e-06

>Medtr8g080150.1 | polynucleotide 5-hydroxyl-kinase NOL9-like
           protein | HC | chr8:34427716-34424835 | 20130731
          Length = 380

 Score =  508 bits (1308), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/358 (69%), Positives = 297/358 (82%), Gaps = 6/358 (1%)

Query: 1   MGSSPS---PDIYIPEQWSEAAGSIADSSTPPITLICGAKNGGKTIFSRYLLNVLLHRYS 57
           MGSS +   PDIYIP++WS+AA SI  S TPPITL+CGA N GK+ FSR LLNVLL R +
Sbjct: 1   MGSSSAFVLPDIYIPQKWSQAANSITSSPTPPITLVCGASNCGKSTFSRNLLNVLLTRCN 60

Query: 58  RVAYLDTDVGQPEFTAPAFLSLTIVHQETPDITIPCLKTPERCLFFGDVSSKRDPTSYLN 117
           +VAYL+TDVGQPEFT P F+SLTIV++ TPD+TIPCLKTPER LFFGDVSS++DP++YL 
Sbjct: 61  KVAYLETDVGQPEFTPPGFVSLTIVNKVTPDLTIPCLKTPERSLFFGDVSSQKDPSTYLK 120

Query: 118 YVFAIYDYYRKEYCSLDKEENSPMIDLPLIVNTPGWVKGVGYSVLVDMLKYICPTHVVKL 177
           Y+ +IYDYYRKEYC+ DK +NS  I LPL+VNT GWVKG GY VLV+MLKYI PTH+VK+
Sbjct: 121 YICSIYDYYRKEYCTFDKRQNSSKIHLPLVVNTSGWVKGDGYKVLVNMLKYIGPTHIVKI 180

Query: 178 SISSENKNLPAGQFWLDGEHNGTINLIEINSARQDSLNRSVLVQKDARLLRDLRIMAYFR 237
            IS++ KN+P G+F  +G+++  + LIEI  ARQDS   SV  QKDARL+RD RI+AYFR
Sbjct: 181 GISTDLKNIPVGKFGSNGKNDRRVKLIEIYPARQDS---SVPAQKDARLVRDSRIIAYFR 237

Query: 238 QCFPSDSDISTIKELAHSLASHCPYEVPIASIKIQHLHREVPSSEMFYSLNASIVGLAVD 297
           QCFPSDSDISTIK+LA+SL SHCPY V IASIKI+ +  EVP SE+  SLNASIVGLAV+
Sbjct: 238 QCFPSDSDISTIKDLANSLTSHCPYNVLIASIKIRRVLHEVPISEILSSLNASIVGLAVE 297

Query: 298 SEGPENLPWCLGLGIVRGIDTIKGVLYVITPVPHSSLDKVNLLLQGYIQIPICLLQVQ 355
           SEGP+ LPWCLGLG+VRGIDT+KG+LY+ITPVP  SL KVNLLLQG IQIP  LLQ++
Sbjct: 298 SEGPKKLPWCLGLGLVRGIDTVKGMLYLITPVPFGSLKKVNLLLQGNIQIPTSLLQMR 355


>Medtr8g080140.1 | polynucleotide 5-hydroxyl-kinase NOL9-like
           protein | HC | chr8:34420627-34415871 | 20130731
          Length = 370

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/357 (67%), Positives = 284/357 (79%), Gaps = 8/357 (2%)

Query: 1   MGSSPSPDIYIPEQWSEAAGSIADSSTPPITLICGAKNGGKTIFSRYLLNVLLH-RYSRV 59
           MGS P PDI+IPE+WS+AA SI  SSTPP+ L+CG  + GK+ F+RYLLN+LL  R  +V
Sbjct: 1   MGSYPPPDIFIPEEWSQAANSIVSSSTPPVVLVCGPGSVGKSTFARYLLNLLLTTRCKKV 60

Query: 60  AYLDTDVGQPEFTAPAFLSLTIVHQETPDITIPCLKTPERCLFFGDVSSKRDPTSYLNYV 119
           AYLDTDVGQ EFT    +SLT+V+  TPD+    LK  +R LFFGD+S K DP+ +L YV
Sbjct: 61  AYLDTDVGQTEFTPLGLISLTVVYDITPDLKTKYLKPSKRSLFFGDISPKIDPSVFLEYV 120

Query: 120 FAIYDYYRKEYCSLDKEENSPMIDLPLIVNTPGWVKGVGYSVLVDMLKYICPTHVVKLSI 179
            +IYD+Y+K+Y + DK +N+  I  PLIVNT GWVKGVGY VLVDMLKYI PTHVVK+ +
Sbjct: 121 CSIYDHYQKKYRTFDKRKNASKIQTPLIVNTSGWVKGVGYEVLVDMLKYIGPTHVVKIDL 180

Query: 180 SSE---NKNLPAGQFWLDGEHNGTINLIEINSARQDSLNRSVLVQKDARLLRDLRIMAYF 236
           S+E    KNLPAG+FWLDGE +GTI LIEI+SA +D      +VQK+ARLLR+ RI+AYF
Sbjct: 181 STEFYKYKNLPAGKFWLDGEDDGTIKLIEIDSALKDR----EIVQKEARLLREERIVAYF 236

Query: 237 RQCFPSDSDISTIKELAHSLASHCPYEVPIASIKIQHLHREVPSSEMFYSLNASIVGLAV 296
            QCFPSDS IST KE AHSL SHCPY+VPIASIKI+H+HREVPSSE+FY LNASIVGLAV
Sbjct: 237 EQCFPSDSGISTHKETAHSLTSHCPYQVPIASIKIRHVHREVPSSEIFYGLNASIVGLAV 296

Query: 297 DSEGPENLPWCLGLGIVRGIDTIKGVLYVITPVPHSSLDKVNLLLQGYIQIPICLLQ 353
           +SE P +LPWCLGLGIVRGIDT+KG+LYVITPVP  SL KVNLLLQG IQ P  LLQ
Sbjct: 297 ESEVPGDLPWCLGLGIVRGIDTVKGMLYVITPVPFVSLKKVNLLLQGDIQFPTDLLQ 353


>Medtr8g080140.2 | polynucleotide 5-hydroxyl-kinase NOL9-like
           protein | HC | chr8:34420627-34415871 | 20130731
          Length = 370

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/357 (67%), Positives = 284/357 (79%), Gaps = 8/357 (2%)

Query: 1   MGSSPSPDIYIPEQWSEAAGSIADSSTPPITLICGAKNGGKTIFSRYLLNVLLH-RYSRV 59
           MGS P PDI+IPE+WS+AA SI  SSTPP+ L+CG  + GK+ F+RYLLN+LL  R  +V
Sbjct: 1   MGSYPPPDIFIPEEWSQAANSIVSSSTPPVVLVCGPGSVGKSTFARYLLNLLLTTRCKKV 60

Query: 60  AYLDTDVGQPEFTAPAFLSLTIVHQETPDITIPCLKTPERCLFFGDVSSKRDPTSYLNYV 119
           AYLDTDVGQ EFT    +SLT+V+  TPD+    LK  +R LFFGD+S K DP+ +L YV
Sbjct: 61  AYLDTDVGQTEFTPLGLISLTVVYDITPDLKTKYLKPSKRSLFFGDISPKIDPSVFLEYV 120

Query: 120 FAIYDYYRKEYCSLDKEENSPMIDLPLIVNTPGWVKGVGYSVLVDMLKYICPTHVVKLSI 179
            +IYD+Y+K+Y + DK +N+  I  PLIVNT GWVKGVGY VLVDMLKYI PTHVVK+ +
Sbjct: 121 CSIYDHYQKKYRTFDKRKNASKIQTPLIVNTSGWVKGVGYEVLVDMLKYIGPTHVVKIDL 180

Query: 180 SSE---NKNLPAGQFWLDGEHNGTINLIEINSARQDSLNRSVLVQKDARLLRDLRIMAYF 236
           S+E    KNLPAG+FWLDGE +GTI LIEI+SA +D      +VQK+ARLLR+ RI+AYF
Sbjct: 181 STEFYKYKNLPAGKFWLDGEDDGTIKLIEIDSALKDR----EIVQKEARLLREERIVAYF 236

Query: 237 RQCFPSDSDISTIKELAHSLASHCPYEVPIASIKIQHLHREVPSSEMFYSLNASIVGLAV 296
            QCFPSDS IST KE AHSL SHCPY+VPIASIKI+H+HREVPSSE+FY LNASIVGLAV
Sbjct: 237 EQCFPSDSGISTHKETAHSLTSHCPYQVPIASIKIRHVHREVPSSEIFYGLNASIVGLAV 296

Query: 297 DSEGPENLPWCLGLGIVRGIDTIKGVLYVITPVPHSSLDKVNLLLQGYIQIPICLLQ 353
           +SE P +LPWCLGLGIVRGIDT+KG+LYVITPVP  SL KVNLLLQG IQ P  LLQ
Sbjct: 297 ESEVPGDLPWCLGLGIVRGIDTVKGMLYVITPVPFVSLKKVNLLLQGDIQFPTDLLQ 353


>Medtr1g116060.1 | Pre-mRNA cleavage complex II protein Clp1 | HC |
           chr1:52452926-52448755 | 20130731
          Length = 438

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 6/142 (4%)

Query: 26  STPPITLICGAKNGGKTIFSRYLLNVLLHRYSRVAYLDTDVGQPEFTAPAFLSLTIVHQE 85
           S  P  ++ G  + GKT  SR LL+    +  +  ++D D+GQ   T P  ++ T +   
Sbjct: 124 SQGPRVIVVGPSDSGKTTLSRMLLSWAAKQGWKPTFVDLDIGQGSITVPGCIAATPIEMP 183

Query: 86  TPDITIPCLKTPERCLFFGDVSSKRDPTSYLNYVFAIYDYYRKEYCSLDKEENSPMIDLP 145
              +    L+ P    F+G  S   +   Y   V  +     +++    +   + M    
Sbjct: 184 IDPVEGIPLEMP-LVYFYGHTSPSNNVELYKVLVKELAGILERQFAGNAESRAAGM---- 238

Query: 146 LIVNTPGWVKGVGYSVLVDMLK 167
            ++NT GW++G+GY +L+  ++
Sbjct: 239 -VLNTMGWIEGLGYDMLLHAIR 259