Miyakogusa Predicted Gene

Lj1g3v0416410.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0416410.3 Non Characterized Hit- tr|I1LX15|I1LX15_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42516 PE,64.71,0.00003,
,CUFF.25850.3
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor ...    50   4e-07

>Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor R1
           | LC | scaffold0024:150614-158393 | 20130731
          Length = 735

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/34 (55%), Positives = 27/34 (79%)

Query: 6   DIKVQEGDGTAFDERWSVYGPEKKNEIDKYISSR 39
           D+K+ + DG   DE+W VYG E+K+E++KYISSR
Sbjct: 691 DLKIHDEDGVEVDEKWFVYGAEQKDEVNKYISSR 724