Miyakogusa Predicted Gene

Lj1g3v0415850.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0415850.2 Non Characterized Hit- tr|C6T147|C6T147_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,57.14,0.000000006, ,CUFF.25795.2
         (112 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g021220.1 | cobalt ion transmembrane transporters protein ...    59   9e-10

>Medtr2g021220.1 | cobalt ion transmembrane transporters protein |
          HC | chr2:7181514-7176240 | 20130731
          Length = 375

 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 25/39 (64%), Positives = 29/39 (74%)

Query: 43 NWSQWLTTSSFAADKVFRFIAGSTASPFGHFVFSPLCFF 81
          NWS+W+ T SFAADKVFR I+ +TASP G FV SP  F 
Sbjct: 58 NWSKWIPTGSFAADKVFRLISSATASPIGQFVSSPTTFL 96