Miyakogusa Predicted Gene

Lj1g3v0415470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0415470.1 Non Characterized Hit- tr|I3T3Z5|I3T3Z5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,DUF393,Putative thiol-disulphide oxidoreductase DCC;
Thioredoxin-like,Thioredoxin-like fold; seg,NUL,CUFF.25754.1
         (216 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g078320.1 | thiol-disulfide oxidoreductase DCC | HC | chr3...   308   2e-84
Medtr3g078320.2 | thiol-disulfide oxidoreductase DCC | HC | chr3...   228   4e-60

>Medtr3g078320.1 | thiol-disulfide oxidoreductase DCC | HC |
           chr3:35287762-35290728 | 20130731
          Length = 224

 Score =  308 bits (790), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 150/177 (84%), Positives = 162/177 (91%), Gaps = 5/177 (2%)

Query: 44  IRKLGSQCHIRAISEAAAVEPAISKKEGDG----RDWKIKILYDGDCPLCMREVNMLRER 99
           IRK GSQC+IRAIS+ A VE  ISKKE +G    +DWKIK+LYDGDCPLCMREVNMLRER
Sbjct: 49  IRKPGSQCYIRAISDRA-VESTISKKEEEGEQSPKDWKIKMLYDGDCPLCMREVNMLRER 107

Query: 100 NKSYGTIKFVDIGSDDYSPEENQGLDYETAMGRIHAVLSDGTVVTDVEAFRRLYEQVGLG 159
           N SYGTIKFVDIGSDDYSP+ENQGLDY+TAMGRIHA+LSDGTVVTDVEAFRRLYEQVGLG
Sbjct: 108 NTSYGTIKFVDIGSDDYSPDENQGLDYQTAMGRIHAILSDGTVVTDVEAFRRLYEQVGLG 167

Query: 160 WVYAITKYEPIAKIADSVYGVWAKYRLQVTGRPSIEEILEARKKKGEVCKNSNACKM 216
           WVYAITKYEPI KIADSVY  WAKYRLQVTGRP +EEILEAR+KKGEVCK+S+ACKM
Sbjct: 168 WVYAITKYEPIGKIADSVYSFWAKYRLQVTGRPPMEEILEARRKKGEVCKDSDACKM 224


>Medtr3g078320.2 | thiol-disulfide oxidoreductase DCC | HC |
           chr3:35287762-35290126 | 20130731
          Length = 185

 Score =  228 bits (580), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 111/130 (85%), Positives = 119/130 (91%), Gaps = 5/130 (3%)

Query: 44  IRKLGSQCHIRAISEAAAVEPAISKKEGDG----RDWKIKILYDGDCPLCMREVNMLRER 99
           IRK GSQC+IRAIS+ A VE  ISKKE +G    +DWKIK+LYDGDCPLCMREVNMLRER
Sbjct: 49  IRKPGSQCYIRAISDRA-VESTISKKEEEGEQSPKDWKIKMLYDGDCPLCMREVNMLRER 107

Query: 100 NKSYGTIKFVDIGSDDYSPEENQGLDYETAMGRIHAVLSDGTVVTDVEAFRRLYEQVGLG 159
           N SYGTIKFVDIGSDDYSP+ENQGLDY+TAMGRIHA+LSDGTVVTDVEAFRRLYEQVGLG
Sbjct: 108 NTSYGTIKFVDIGSDDYSPDENQGLDYQTAMGRIHAILSDGTVVTDVEAFRRLYEQVGLG 167

Query: 160 WVYAITKYEP 169
           WVYAITKYEP
Sbjct: 168 WVYAITKYEP 177