Miyakogusa Predicted Gene

Lj1g3v0411510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0411510.1 Non Characterized Hit- tr|I1MB49|I1MB49_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,74.55,0.00000000001,
,NODE_94123_length_825_cov_38.450909.path2.1
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g068530.2 | C2 domain protein | HC | chr5:29013902-2901048...    72   1e-13
Medtr5g068530.1 | C2 domain protein | HC | chr5:29013902-2901043...    72   1e-13
Medtr3g093560.1 | calcium-dependent lipid-binding (CaLB domain) ...    47   5e-06
Medtr5g068540.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    46   6e-06

>Medtr5g068530.2 | C2 domain protein | HC | chr5:29013902-29010483 |
           20130731
          Length = 334

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/48 (75%), Positives = 40/48 (83%)

Query: 1   MALASFHGLEKQEQINNPHSHPVPFPTNYSNPYVGGPSYPATAGPSYQ 48
           M  ASF+G  KQ Q N P+SHPVP+PTNYSNPYVGGPSYPA +GPSYQ
Sbjct: 216 MDPASFNGPHKQAQTNVPYSHPVPYPTNYSNPYVGGPSYPAASGPSYQ 263


>Medtr5g068530.1 | C2 domain protein | HC | chr5:29013902-29010432 |
           20130731
          Length = 358

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/45 (77%), Positives = 39/45 (86%)

Query: 4   ASFHGLEKQEQINNPHSHPVPFPTNYSNPYVGGPSYPATAGPSYQ 48
           ASF+G  KQ Q N P+SHPVP+PTNYSNPYVGGPSYPA +GPSYQ
Sbjct: 219 ASFNGPHKQAQTNVPYSHPVPYPTNYSNPYVGGPSYPAASGPSYQ 263


>Medtr3g093560.1 | calcium-dependent lipid-binding (CaLB domain)
           family protein, putative | HC | chr3:42749804-42751253 |
           20130731
          Length = 310

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 5   SFHGLEKQEQINNPHSHPVPF-PTNYSNPYVGGPSYPATAGPSYQPPRT 52
           S H  E  +  N   S+ VPF PT YS+ Y+G PSY A AGPSYQP RT
Sbjct: 187 SIHQAEDHKNTNVLDSYSVPFTPTIYSDQYLGEPSYHAAAGPSYQPHRT 235


>Medtr5g068540.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           LC | chr5:29018170-29014149 | 20130731
          Length = 369

 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/38 (57%), Positives = 25/38 (65%)

Query: 8   GLEKQEQINNPHSHPVPFPTNYSNPYVGGPSYPATAGP 45
           G+E     N      VP PTNYSNPYVGGP+YPA +GP
Sbjct: 242 GIELLNNANKGGFGQVPIPTNYSNPYVGGPNYPAASGP 279