Miyakogusa Predicted Gene

Lj1g3v0411300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0411300.1 Non Characterized Hit- tr|K3XHG0|K3XHG0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001331,43.9,8e-19,seg,NULL; DUF588,Uncharacterised protein family
UPF0497, trans-membrane plant,CUFF.25678.1
         (281 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g078010.1 | CASP ARALYDRAFT-like protein | HC | chr3:35146...   329   2e-90
Medtr4g106940.1 | CASP ARALYDRAFT-like protein | HC | chr4:43951...   234   5e-62
Medtr7g034390.2 | transmembrane protein, putative | HC | chr7:12...   139   2e-33
Medtr7g034390.1 | transmembrane protein, putative | HC | chr7:12...   135   4e-32
Medtr7g071110.1 | CASP-like protein | HC | chr7:26328733-2633072...    74   2e-13
Medtr6g007160.1 | transmembrane protein, putative | HC | chr6:14...    74   2e-13
Medtr4g013270.1 | CASP ARALYDRAFT-like protein | HC | chr4:36763...    60   2e-09

>Medtr3g078010.1 | CASP ARALYDRAFT-like protein | HC |
           chr3:35146346-35143714 | 20130731
          Length = 296

 Score =  329 bits (844), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 177/281 (62%), Positives = 195/281 (69%), Gaps = 19/281 (6%)

Query: 9   SNSMKKSLSRGSESSTQFESPHHFSSPTLWVPESTESPEYRSPQNSPGVWVDNS--LAVV 66
           S +MKKS SRGS+S TQFESP  F SP  W P  T+SPEYRSP+NSPG  ++NS  +AVV
Sbjct: 20  SPAMKKSWSRGSDS-TQFESPARFCSPLRWDP--TDSPEYRSPENSPGKMMENSNPMAVV 76

Query: 67  PVKK-SAPGPGKASERQKPPENAASAAVTVFNPTTTREEPQRPATKVG--------ERRS 117
            V K     PGK +E+QKPPENA    + V N  + REEP+R   KVG        ERR 
Sbjct: 77  AVDKVRQLTPGKLTEQQKPPENA----LAVVN-RSEREEPERQVMKVGTTEEGGERERRV 131

Query: 118 RSAPAGWKAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCM 177
           RS   G  AEEV RK ALGFRL EV VCLISFSVMAA++TQGWSGDSYDRYKEYRYCL +
Sbjct: 132 RSDSVGKTAEEVTRKAALGFRLCEVVVCLISFSVMAANKTQGWSGDSYDRYKEYRYCLSV 191

Query: 178 NVIGFAHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDW 237
           NVIGFA++ LQ CDLA QLVT KH+ISHHLRYHF FFMDQV             TRVDDW
Sbjct: 192 NVIGFAYAALQACDLAFQLVTEKHMISHHLRYHFQFFMDQVVAYLLISASSSAATRVDDW 251

Query: 238 QSNWGKDEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTR 278
           QSNWGKDEFTEMATVSVG              ISGYILCTR
Sbjct: 252 QSNWGKDEFTEMATVSVGMSFLSFGAFAMSSLISGYILCTR 292


>Medtr4g106940.1 | CASP ARALYDRAFT-like protein | HC |
           chr4:43951134-43949095 | 20130731
          Length = 288

 Score =  234 bits (598), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 132/289 (45%), Positives = 163/289 (56%), Gaps = 25/289 (8%)

Query: 12  MKKSLSRGSESSTQFESPHHFSSPTLW--VPESTESPEYRSPQNSP-GVWVDNSLAVVPV 68
           MK + +R S+SS+ F+SPH   SP  +   P S     + S +NSP     DNS A+V +
Sbjct: 1   MKNASTRNSDSSSHFDSPH---SPLRFKSSPLSDGGDPFHSTENSPENSHRDNSRAIVII 57

Query: 69  KKS-----APGPGKASERQKPPENAASAAV-------------TVFNPTTTREEPQRPAT 110
           + S            SE +  P N   A V             T   P  TR   +    
Sbjct: 58  EPSIQHSQVSASVPDSEHRNHPVNEQPAVVVNRAMRNDPPPTTTNLGPNVTRGGREDGGG 117

Query: 111 KVGERRSRSAPAGWKAEEVVR-KVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYK 169
           +  +R +  A   W   +V+  KVALGFR+SEV +CLISFSVMAAD+TQGWSGDS+DRYK
Sbjct: 118 RSRQRTTTPAVPAWSKSDVMTGKVALGFRISEVVLCLISFSVMAADKTQGWSGDSFDRYK 177

Query: 170 EYRYCLCMNVIGFAHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXX 229
           EYRYCL M VIGF ++G Q C+L  QL+TGKHI++HHLR+HFDF MDQV           
Sbjct: 178 EYRYCLSMTVIGFVYAGFQACELGYQLITGKHIVNHHLRFHFDFLMDQVLAYLLISSASS 237

Query: 230 XXTRVDDWQSNWGKDEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTR 278
             TRVDDWQSNWGKDEFTEMA+ S+               ISGY LC R
Sbjct: 238 AATRVDDWQSNWGKDEFTEMASASIALAFLAFIAFAISSLISGYNLCNR 286


>Medtr7g034390.2 | transmembrane protein, putative | HC |
           chr7:12870052-12873486 | 20130731
          Length = 296

 Score =  139 bits (351), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 92/154 (59%), Gaps = 2/154 (1%)

Query: 125 KAEEVV--RKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCMNVIGF 182
           ++E+VV   KV LG R++    CL+S+SV+AADR +GW+ DS+  YKE+RY L +NVIGF
Sbjct: 140 RSEKVVSLNKVLLGLRVAGFVFCLVSWSVLAADRKKGWAIDSFYLYKEFRYSLSVNVIGF 199

Query: 183 AHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDWQSNWG 242
            +S +Q+CDL   L+T KHI+ H LR +F F +DQ+             TR  DW+SNWG
Sbjct: 200 VYSAVQICDLVKYLITKKHIVEHKLRGYFTFALDQILTYLLMSASSSAATRAYDWESNWG 259

Query: 243 KDEFTEMATVSVGXXXXXXXXXXXXXXISGYILC 276
            D+F  MA  SV               +SG I+C
Sbjct: 260 NDKFPFMANASVVLSFIAFAAFALTSLVSGSIVC 293


>Medtr7g034390.1 | transmembrane protein, putative | HC |
           chr7:12870132-12874317 | 20130731
          Length = 303

 Score =  135 bits (340), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 2/132 (1%)

Query: 125 KAEEVV--RKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCMNVIGF 182
           ++E+VV   KV LG R++    CL+S+SV+AADR +GW+ DS+  YKE+RY L +NVIGF
Sbjct: 140 RSEKVVSLNKVLLGLRVAGFVFCLVSWSVLAADRKKGWAIDSFYLYKEFRYSLSVNVIGF 199

Query: 183 AHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDWQSNWG 242
            +S +Q+CDL   L+T KHI+ H LR +F F +DQ+             TR  DW+SNWG
Sbjct: 200 VYSAVQICDLVKYLITKKHIVEHKLRGYFTFALDQILTYLLMSASSSAATRAYDWESNWG 259

Query: 243 KDEFTEMATVSV 254
            D+F  MA  SV
Sbjct: 260 NDKFPFMANASV 271


>Medtr7g071110.1 | CASP-like protein | HC | chr7:26328733-26330721 |
           20130731
          Length = 202

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 3/156 (1%)

Query: 124 WKAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCMNVIGFA 183
           WK E+++++ +LG R   +   LISF VMA+++   W    +D+Y+EYRY L + ++   
Sbjct: 48  WKREDLIKRGSLGLRGIGLLFSLISFIVMASNKHGDWK--DFDKYEEYRYLLAIAILSSL 105

Query: 184 HSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDWQSNWGK 243
           ++G Q      +L TGK +I   +    DFF DQ+               + +       
Sbjct: 106 YTGAQAFRQVHELSTGKQLIKPRMAALIDFFGDQIMAYLLISSASSAIP-ITNRMREGAD 164

Query: 244 DEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTRS 279
           + FT+ +  ++               ISGY L T+S
Sbjct: 165 NIFTDASAAAISMSVFAFLCLGASALISGYKLSTQS 200


>Medtr6g007160.1 | transmembrane protein, putative | HC |
           chr6:1477503-1475465 | 20130731
          Length = 234

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 81/205 (39%), Gaps = 30/205 (14%)

Query: 93  VTVFNPTTTREEPQRPATKVGERRSRSAPAGWKAEEVVRKVALGFRLSEVAVCLISFSVM 152
           + + +P  T  + +   T     +S+     + A  V+R  A  F       CLI+FSV+
Sbjct: 36  INMMDPKNTSGDTEVVITNF--LKSKKEVKWYVALLVIRVFAFVF-------CLIAFSVL 86

Query: 153 AA--------DRTQGWSGDSYD----------RYKEYRYCLCMNVIGFAHSGLQVCDLAC 194
            A        +    W    +           ++ E+RY    NVIGF +SGLQ+C L  
Sbjct: 87  GASEQRVLVSENLTNWYSSGFTIQTPYEFHWYKWDEFRYSFAANVIGFVYSGLQICHLVM 146

Query: 195 QLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDWQSNW---GKDEFTEMAT 251
            L+T KH I+  L+ +F+  +DQ              T     +  W   G D F EMA 
Sbjct: 147 YLITKKHTINPKLQGYFNVAIDQTLAYILMSASSSAATAAHLLKDYWLEHGADTFIEMAN 206

Query: 252 VSVGXXXXXXXXXXXXXXISGYILC 276
            SV               +SG ILC
Sbjct: 207 ASVSMSFLAFGAFALASLVSGIILC 231


>Medtr4g013270.1 | CASP ARALYDRAFT-like protein | HC |
           chr4:3676397-3674459 | 20130731
          Length = 187

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 3/152 (1%)

Query: 124 WKAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCMNVIGFA 183
           WK E+ +++ +LG R   +   L SF +MA+++  G+ G+++D Y+EYRY L +      
Sbjct: 35  WKREDSLKRASLGLRGVTLFFSLTSFLLMASNK-HGY-GENFDHYQEYRYLLVVAFFTSI 92

Query: 184 HSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDWQSNWGK 243
           ++G QV     +L+TG +I         DF  DQV                D  + N   
Sbjct: 93  YTGSQVYRQIHELITGNNIFRPTTAAVIDFVGDQVIAYLLISSASTAVPLTDRMREN-DD 151

Query: 244 DEFTEMATVSVGXXXXXXXXXXXXXXISGYIL 275
           D FT+ +  ++               ISGY L
Sbjct: 152 DAFTDASAATITMSFFAFTFLALSAIISGYKL 183