Miyakogusa Predicted Gene
- Lj1g3v0411300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0411300.1 Non Characterized Hit- tr|K3XHG0|K3XHG0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001331,43.9,8e-19,seg,NULL; DUF588,Uncharacterised protein family
UPF0497, trans-membrane plant,CUFF.25678.1
(281 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g078010.1 | CASP ARALYDRAFT-like protein | HC | chr3:35146... 329 2e-90
Medtr4g106940.1 | CASP ARALYDRAFT-like protein | HC | chr4:43951... 234 5e-62
Medtr7g034390.2 | transmembrane protein, putative | HC | chr7:12... 139 2e-33
Medtr7g034390.1 | transmembrane protein, putative | HC | chr7:12... 135 4e-32
Medtr7g071110.1 | CASP-like protein | HC | chr7:26328733-2633072... 74 2e-13
Medtr6g007160.1 | transmembrane protein, putative | HC | chr6:14... 74 2e-13
Medtr4g013270.1 | CASP ARALYDRAFT-like protein | HC | chr4:36763... 60 2e-09
>Medtr3g078010.1 | CASP ARALYDRAFT-like protein | HC |
chr3:35146346-35143714 | 20130731
Length = 296
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/281 (62%), Positives = 195/281 (69%), Gaps = 19/281 (6%)
Query: 9 SNSMKKSLSRGSESSTQFESPHHFSSPTLWVPESTESPEYRSPQNSPGVWVDNS--LAVV 66
S +MKKS SRGS+S TQFESP F SP W P T+SPEYRSP+NSPG ++NS +AVV
Sbjct: 20 SPAMKKSWSRGSDS-TQFESPARFCSPLRWDP--TDSPEYRSPENSPGKMMENSNPMAVV 76
Query: 67 PVKK-SAPGPGKASERQKPPENAASAAVTVFNPTTTREEPQRPATKVG--------ERRS 117
V K PGK +E+QKPPENA + V N + REEP+R KVG ERR
Sbjct: 77 AVDKVRQLTPGKLTEQQKPPENA----LAVVN-RSEREEPERQVMKVGTTEEGGERERRV 131
Query: 118 RSAPAGWKAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCM 177
RS G AEEV RK ALGFRL EV VCLISFSVMAA++TQGWSGDSYDRYKEYRYCL +
Sbjct: 132 RSDSVGKTAEEVTRKAALGFRLCEVVVCLISFSVMAANKTQGWSGDSYDRYKEYRYCLSV 191
Query: 178 NVIGFAHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDW 237
NVIGFA++ LQ CDLA QLVT KH+ISHHLRYHF FFMDQV TRVDDW
Sbjct: 192 NVIGFAYAALQACDLAFQLVTEKHMISHHLRYHFQFFMDQVVAYLLISASSSAATRVDDW 251
Query: 238 QSNWGKDEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTR 278
QSNWGKDEFTEMATVSVG ISGYILCTR
Sbjct: 252 QSNWGKDEFTEMATVSVGMSFLSFGAFAMSSLISGYILCTR 292
>Medtr4g106940.1 | CASP ARALYDRAFT-like protein | HC |
chr4:43951134-43949095 | 20130731
Length = 288
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 163/289 (56%), Gaps = 25/289 (8%)
Query: 12 MKKSLSRGSESSTQFESPHHFSSPTLW--VPESTESPEYRSPQNSP-GVWVDNSLAVVPV 68
MK + +R S+SS+ F+SPH SP + P S + S +NSP DNS A+V +
Sbjct: 1 MKNASTRNSDSSSHFDSPH---SPLRFKSSPLSDGGDPFHSTENSPENSHRDNSRAIVII 57
Query: 69 KKS-----APGPGKASERQKPPENAASAAV-------------TVFNPTTTREEPQRPAT 110
+ S SE + P N A V T P TR +
Sbjct: 58 EPSIQHSQVSASVPDSEHRNHPVNEQPAVVVNRAMRNDPPPTTTNLGPNVTRGGREDGGG 117
Query: 111 KVGERRSRSAPAGWKAEEVVR-KVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYK 169
+ +R + A W +V+ KVALGFR+SEV +CLISFSVMAAD+TQGWSGDS+DRYK
Sbjct: 118 RSRQRTTTPAVPAWSKSDVMTGKVALGFRISEVVLCLISFSVMAADKTQGWSGDSFDRYK 177
Query: 170 EYRYCLCMNVIGFAHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXX 229
EYRYCL M VIGF ++G Q C+L QL+TGKHI++HHLR+HFDF MDQV
Sbjct: 178 EYRYCLSMTVIGFVYAGFQACELGYQLITGKHIVNHHLRFHFDFLMDQVLAYLLISSASS 237
Query: 230 XXTRVDDWQSNWGKDEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTR 278
TRVDDWQSNWGKDEFTEMA+ S+ ISGY LC R
Sbjct: 238 AATRVDDWQSNWGKDEFTEMASASIALAFLAFIAFAISSLISGYNLCNR 286
>Medtr7g034390.2 | transmembrane protein, putative | HC |
chr7:12870052-12873486 | 20130731
Length = 296
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 125 KAEEVV--RKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCMNVIGF 182
++E+VV KV LG R++ CL+S+SV+AADR +GW+ DS+ YKE+RY L +NVIGF
Sbjct: 140 RSEKVVSLNKVLLGLRVAGFVFCLVSWSVLAADRKKGWAIDSFYLYKEFRYSLSVNVIGF 199
Query: 183 AHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDWQSNWG 242
+S +Q+CDL L+T KHI+ H LR +F F +DQ+ TR DW+SNWG
Sbjct: 200 VYSAVQICDLVKYLITKKHIVEHKLRGYFTFALDQILTYLLMSASSSAATRAYDWESNWG 259
Query: 243 KDEFTEMATVSVGXXXXXXXXXXXXXXISGYILC 276
D+F MA SV +SG I+C
Sbjct: 260 NDKFPFMANASVVLSFIAFAAFALTSLVSGSIVC 293
>Medtr7g034390.1 | transmembrane protein, putative | HC |
chr7:12870132-12874317 | 20130731
Length = 303
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 2/132 (1%)
Query: 125 KAEEVV--RKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCMNVIGF 182
++E+VV KV LG R++ CL+S+SV+AADR +GW+ DS+ YKE+RY L +NVIGF
Sbjct: 140 RSEKVVSLNKVLLGLRVAGFVFCLVSWSVLAADRKKGWAIDSFYLYKEFRYSLSVNVIGF 199
Query: 183 AHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDWQSNWG 242
+S +Q+CDL L+T KHI+ H LR +F F +DQ+ TR DW+SNWG
Sbjct: 200 VYSAVQICDLVKYLITKKHIVEHKLRGYFTFALDQILTYLLMSASSSAATRAYDWESNWG 259
Query: 243 KDEFTEMATVSV 254
D+F MA SV
Sbjct: 260 NDKFPFMANASV 271
>Medtr7g071110.1 | CASP-like protein | HC | chr7:26328733-26330721 |
20130731
Length = 202
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 124 WKAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCMNVIGFA 183
WK E+++++ +LG R + LISF VMA+++ W +D+Y+EYRY L + ++
Sbjct: 48 WKREDLIKRGSLGLRGIGLLFSLISFIVMASNKHGDWK--DFDKYEEYRYLLAIAILSSL 105
Query: 184 HSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDWQSNWGK 243
++G Q +L TGK +I + DFF DQ+ + +
Sbjct: 106 YTGAQAFRQVHELSTGKQLIKPRMAALIDFFGDQIMAYLLISSASSAIP-ITNRMREGAD 164
Query: 244 DEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTRS 279
+ FT+ + ++ ISGY L T+S
Sbjct: 165 NIFTDASAAAISMSVFAFLCLGASALISGYKLSTQS 200
>Medtr6g007160.1 | transmembrane protein, putative | HC |
chr6:1477503-1475465 | 20130731
Length = 234
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 81/205 (39%), Gaps = 30/205 (14%)
Query: 93 VTVFNPTTTREEPQRPATKVGERRSRSAPAGWKAEEVVRKVALGFRLSEVAVCLISFSVM 152
+ + +P T + + T +S+ + A V+R A F CLI+FSV+
Sbjct: 36 INMMDPKNTSGDTEVVITNF--LKSKKEVKWYVALLVIRVFAFVF-------CLIAFSVL 86
Query: 153 AA--------DRTQGWSGDSYD----------RYKEYRYCLCMNVIGFAHSGLQVCDLAC 194
A + W + ++ E+RY NVIGF +SGLQ+C L
Sbjct: 87 GASEQRVLVSENLTNWYSSGFTIQTPYEFHWYKWDEFRYSFAANVIGFVYSGLQICHLVM 146
Query: 195 QLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDWQSNW---GKDEFTEMAT 251
L+T KH I+ L+ +F+ +DQ T + W G D F EMA
Sbjct: 147 YLITKKHTINPKLQGYFNVAIDQTLAYILMSASSSAATAAHLLKDYWLEHGADTFIEMAN 206
Query: 252 VSVGXXXXXXXXXXXXXXISGYILC 276
SV +SG ILC
Sbjct: 207 ASVSMSFLAFGAFALASLVSGIILC 231
>Medtr4g013270.1 | CASP ARALYDRAFT-like protein | HC |
chr4:3676397-3674459 | 20130731
Length = 187
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 124 WKAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCMNVIGFA 183
WK E+ +++ +LG R + L SF +MA+++ G+ G+++D Y+EYRY L +
Sbjct: 35 WKREDSLKRASLGLRGVTLFFSLTSFLLMASNK-HGY-GENFDHYQEYRYLLVVAFFTSI 92
Query: 184 HSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDWQSNWGK 243
++G QV +L+TG +I DF DQV D + N
Sbjct: 93 YTGSQVYRQIHELITGNNIFRPTTAAVIDFVGDQVIAYLLISSASTAVPLTDRMREN-DD 151
Query: 244 DEFTEMATVSVGXXXXXXXXXXXXXXISGYIL 275
D FT+ + ++ ISGY L
Sbjct: 152 DAFTDASAATITMSFFAFTFLALSAIISGYKL 183