Miyakogusa Predicted Gene

Lj1g3v0395790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0395790.1 tr|A9S777|A9S777_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_181893,43.52,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.25641.1
         (131 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g077630.1 | transmembrane protein, putative | HC | chr3:34...   228   1e-60
Medtr4g105600.1 | transmembrane protein, putative | HC | chr4:43...   214   2e-56
Medtr7g035095.2 | plant/MGF10-16 protein | HC | chr7:13309506-13...   185   8e-48
Medtr7g035095.1 | plant/MGF10-16 protein | HC | chr7:13310837-13...   185   8e-48
Medtr8g069820.1 | transmembrane protein, putative | HC | chr8:29...   180   4e-46
Medtr5g033940.1 | transmembrane protein, putative | HC | chr5:14...   178   1e-45
Medtr5g033940.2 | transmembrane protein, putative | HC | chr5:14...   178   1e-45
Medtr8g069805.1 | transmembrane protein, putative | HC | chr8:29...   165   8e-42
Medtr1g086330.1 | transmembrane protein, putative | HC | chr1:38...   152   6e-38

>Medtr3g077630.1 | transmembrane protein, putative | HC |
           chr3:34895483-34892075 | 20130731
          Length = 352

 Score =  228 bits (581), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 107/131 (81%), Positives = 117/131 (89%)

Query: 1   MLTDCVFWFVIVPFLTNRDYNLSFLTVCMHSLNAVFLIGDTALNCLRFPWFRIGYFCLWT 60
           +LTDCVFWFV VPFLT +DYNL+FL + MHS+NA+FLIGDTALNCL FPWFR+GYFCLWT
Sbjct: 222 LLTDCVFWFVFVPFLTIKDYNLNFLVIIMHSINAIFLIGDTALNCLPFPWFRMGYFCLWT 281

Query: 61  ATYLIFQWIVHACINLWWPYPFLDLSSSYAPLWYFAVALLHIPCYGIFALVMKLKHYVFT 120
             Y+IFQWIVHAC  LWWPYPFLDLSSSYAPLWYFAVALLHIPCYGIF L MKLKHYV +
Sbjct: 282 VAYVIFQWIVHACKYLWWPYPFLDLSSSYAPLWYFAVALLHIPCYGIFTLGMKLKHYVLS 341

Query: 121 TWCPDSYQCLR 131
           T  PDSYQC+R
Sbjct: 342 TRYPDSYQCVR 352


>Medtr4g105600.1 | transmembrane protein, putative | HC |
           chr4:43845167-43842355 | 20130731
          Length = 350

 Score =  214 bits (545), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 97/131 (74%), Positives = 113/131 (86%)

Query: 1   MLTDCVFWFVIVPFLTNRDYNLSFLTVCMHSLNAVFLIGDTALNCLRFPWFRIGYFCLWT 60
           MLTDC FWF+IVPFLT +DYN++ LT+ MH++NAVFL+GDTALNCLRFPWFRIGYFCLWT
Sbjct: 220 MLTDCAFWFIIVPFLTIKDYNINLLTISMHTINAVFLLGDTALNCLRFPWFRIGYFCLWT 279

Query: 61  ATYLIFQWIVHACINLWWPYPFLDLSSSYAPLWYFAVALLHIPCYGIFALVMKLKHYVFT 120
            TY+IFQWIVHA + +WWPY FLDLSS Y+PL YF++ LLHIPCYGIF L+MKLKH V +
Sbjct: 280 VTYVIFQWIVHAMVKIWWPYTFLDLSSQYSPLCYFSMGLLHIPCYGIFILIMKLKHNVLS 339

Query: 121 TWCPDSYQCLR 131
              PDSYQC R
Sbjct: 340 KRFPDSYQCGR 350


>Medtr7g035095.2 | plant/MGF10-16 protein | HC |
           chr7:13309506-13303782 | 20130731
          Length = 318

 Score =  185 bits (470), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 82/129 (63%), Positives = 102/129 (79%)

Query: 1   MLTDCVFWFVIVPFLTNRDYNLSFLTVCMHSLNAVFLIGDTALNCLRFPWFRIGYFCLWT 60
           MLTDC++W +I PFLT RDY+L+F+TV MH+LN V L GD ALNCLR PW  + +F LWT
Sbjct: 190 MLTDCIYWLIIFPFLTLRDYDLNFMTVNMHTLNLVLLFGDAALNCLRIPWSGMSFFVLWT 249

Query: 61  ATYLIFQWIVHACINLWWPYPFLDLSSSYAPLWYFAVALLHIPCYGIFALVMKLKHYVFT 120
             Y+IFQWI+HAC+++WWPYPFLDLSS  APLWY  +AL+HIPCYG F L+++LKHY  +
Sbjct: 250 GVYVIFQWIIHACVSIWWPYPFLDLSSPSAPLWYLVMALMHIPCYGFFMLILELKHYFLS 309

Query: 121 TWCPDSYQC 129
            W P S QC
Sbjct: 310 KWFPSSCQC 318


>Medtr7g035095.1 | plant/MGF10-16 protein | HC |
           chr7:13310837-13303782 | 20130731
          Length = 318

 Score =  185 bits (470), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 82/129 (63%), Positives = 102/129 (79%)

Query: 1   MLTDCVFWFVIVPFLTNRDYNLSFLTVCMHSLNAVFLIGDTALNCLRFPWFRIGYFCLWT 60
           MLTDC++W +I PFLT RDY+L+F+TV MH+LN V L GD ALNCLR PW  + +F LWT
Sbjct: 190 MLTDCIYWLIIFPFLTLRDYDLNFMTVNMHTLNLVLLFGDAALNCLRIPWSGMSFFVLWT 249

Query: 61  ATYLIFQWIVHACINLWWPYPFLDLSSSYAPLWYFAVALLHIPCYGIFALVMKLKHYVFT 120
             Y+IFQWI+HAC+++WWPYPFLDLSS  APLWY  +AL+HIPCYG F L+++LKHY  +
Sbjct: 250 GVYVIFQWIIHACVSIWWPYPFLDLSSPSAPLWYLVMALMHIPCYGFFMLILELKHYFLS 309

Query: 121 TWCPDSYQC 129
            W P S QC
Sbjct: 310 KWFPSSCQC 318


>Medtr8g069820.1 | transmembrane protein, putative | HC |
           chr8:29474168-29471045 | 20130731
          Length = 345

 Score =  180 bits (456), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 82/130 (63%), Positives = 104/130 (80%)

Query: 2   LTDCVFWFVIVPFLTNRDYNLSFLTVCMHSLNAVFLIGDTALNCLRFPWFRIGYFCLWTA 61
           LTD VFWFV+ P  T+  Y+L FL  CMH++NAVFL+GDT+LNC+RFP FR  YF LWTA
Sbjct: 216 LTDFVFWFVLYPVRTSNHYSLDFLIFCMHTINAVFLLGDTSLNCMRFPVFRFAYFVLWTA 275

Query: 62  TYLIFQWIVHACINLWWPYPFLDLSSSYAPLWYFAVALLHIPCYGIFALVMKLKHYVFTT 121
           T++I QWI+HAC+++WWPYPFLDLSSSYAPLWY AVAL+H PCYG+F L++KLKH+  + 
Sbjct: 276 TFVIIQWIIHACVSIWWPYPFLDLSSSYAPLWYLAVALMHFPCYGLFILIVKLKHFWLSR 335

Query: 122 WCPDSYQCLR 131
             P S + + 
Sbjct: 336 SFPGSSRIVH 345


>Medtr5g033940.1 | transmembrane protein, putative | HC |
           chr5:14675592-14669301 | 20130731
          Length = 328

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 84/131 (64%), Positives = 102/131 (77%)

Query: 1   MLTDCVFWFVIVPFLTNRDYNLSFLTVCMHSLNAVFLIGDTALNCLRFPWFRIGYFCLWT 60
           MLTD VFW VI PF+T++D+ L   TV MHS+NAV L+G+T+LNC+ FP FR  YF LWT
Sbjct: 198 MLTDLVFWLVIYPFMTSKDFRLDIFTVGMHSVNAVLLLGETSLNCMSFPVFRFAYFILWT 257

Query: 61  ATYLIFQWIVHACINLWWPYPFLDLSSSYAPLWYFAVALLHIPCYGIFALVMKLKHYVFT 120
           AT++IFQWIVHA ++LWWPYPFLDLSS YAPLWY AV ++HIPCYG FAL++KLKH   +
Sbjct: 258 ATFVIFQWIVHAVVSLWWPYPFLDLSSPYAPLWYLAVGIMHIPCYGFFALIVKLKHLWLS 317

Query: 121 TWCPDSYQCLR 131
                S Q LR
Sbjct: 318 RLFSGSCQFLR 328


>Medtr5g033940.2 | transmembrane protein, putative | HC |
           chr5:14675376-14669301 | 20130731
          Length = 328

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 84/131 (64%), Positives = 102/131 (77%)

Query: 1   MLTDCVFWFVIVPFLTNRDYNLSFLTVCMHSLNAVFLIGDTALNCLRFPWFRIGYFCLWT 60
           MLTD VFW VI PF+T++D+ L   TV MHS+NAV L+G+T+LNC+ FP FR  YF LWT
Sbjct: 198 MLTDLVFWLVIYPFMTSKDFRLDIFTVGMHSVNAVLLLGETSLNCMSFPVFRFAYFILWT 257

Query: 61  ATYLIFQWIVHACINLWWPYPFLDLSSSYAPLWYFAVALLHIPCYGIFALVMKLKHYVFT 120
           AT++IFQWIVHA ++LWWPYPFLDLSS YAPLWY AV ++HIPCYG FAL++KLKH   +
Sbjct: 258 ATFVIFQWIVHAVVSLWWPYPFLDLSSPYAPLWYLAVGIMHIPCYGFFALIVKLKHLWLS 317

Query: 121 TWCPDSYQCLR 131
                S Q LR
Sbjct: 318 RLFSGSCQFLR 328


>Medtr8g069805.1 | transmembrane protein, putative | HC |
           chr8:29467437-29461483 | 20130731
          Length = 360

 Score =  165 bits (418), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 75/130 (57%), Positives = 96/130 (73%)

Query: 2   LTDCVFWFVIVPFLTNRDYNLSFLTVCMHSLNAVFLIGDTALNCLRFPWFRIGYFCLWTA 61
           LTD VFWFV+ P     +  L FL  CMH++NAVFL+GDT+LNC+RFP FR  YF +WTA
Sbjct: 231 LTDFVFWFVLYPVRAFNNDKLDFLNFCMHTINAVFLLGDTSLNCMRFPVFRFAYFLIWTA 290

Query: 62  TYLIFQWIVHACINLWWPYPFLDLSSSYAPLWYFAVALLHIPCYGIFALVMKLKHYVFTT 121
            ++I QWI+HAC+++WWPYPFLDLSS YAPLWY  V L+H PCYG+F L++KLKH+    
Sbjct: 291 AFVISQWIIHACVSIWWPYPFLDLSSPYAPLWYLGVNLMHFPCYGLFILIVKLKHFWLNR 350

Query: 122 WCPDSYQCLR 131
             P S + + 
Sbjct: 351 SFPGSSRIVH 360


>Medtr1g086330.1 | transmembrane protein, putative | HC |
           chr1:38631852-38630078 | 20130731
          Length = 329

 Score =  152 bits (385), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 71/127 (55%), Positives = 97/127 (76%)

Query: 1   MLTDCVFWFVIVPFLTNRDYNLSFLTVCMHSLNAVFLIGDTALNCLRFPWFRIGYFCLWT 60
           +LTD VFW VIVPFL+   + L+ L  CMH+LNA+FL+ DT LN L FPWFRI YF LW+
Sbjct: 199 ILTDIVFWCVIVPFLSISRFKLNMLMGCMHTLNAIFLLLDTMLNNLPFPWFRIAYFVLWS 258

Query: 61  ATYLIFQWIVHACINLWWPYPFLDLSSSYAPLWYFAVALLHIPCYGIFALVMKLKHYVFT 120
            +Y+IFQW++HAC + WWPYPFL+L+  +APLWY  +AL+HIPCYGI++L++K K  +  
Sbjct: 259 CSYVIFQWVIHACGSTWWPYPFLELNIPWAPLWYICMALVHIPCYGIYSLIVKTKINILH 318

Query: 121 TWCPDSY 127
            + P ++
Sbjct: 319 RFFPRAF 325