Miyakogusa Predicted Gene

Lj1g3v0385510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0385510.1 tr|I1KEV4|I1KEV4_SOYBN Acyl-coenzyme A oxidase
OS=Glycine max GN=Gma.2616 PE=3 SV=1,88.82,0,Acyl-CoA_dh_1,Acyl-CoA
oxidase/dehydrogenase, type 1; Acyl-CoA_dh_M,Acyl-CoA
oxidase/dehydrogenase, ,CUFF.25616.1
         (475 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC | chr4:30622...   902   0.0  
Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC | chr8:38035...   350   2e-96
Medtr5g012920.1 | peroxisomal acyl-coenzyme A oxidase-like prote...   222   5e-58
Medtr4g100640.1 | peroxisomal acyl-coenzyme A oxidase-like prote...   209   6e-54
Medtr4g100640.2 | peroxisomal acyl-coenzyme A oxidase-like prote...   206   4e-53
Medtr7g068850.1 | acyl-CoA dehydrogenase | HC | chr7:25296388-25...    67   5e-11

>Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC |
           chr4:30622603-30615873 | 20130731
          Length = 678

 Score =  902 bits (2331), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/475 (89%), Positives = 453/475 (95%)

Query: 1   MYDHSLAIKIGVHVFLWGGAVKFLGTKRHHDKWLKATENYEMKGCFAMSELGHGSNVRGI 60
           MYDHSLA+K+GVH+FLWGGAVKFLGTKRHHDKWL+ATENY++KGCFAMSELGHGSNVRGI
Sbjct: 142 MYDHSLAVKLGVHIFLWGGAVKFLGTKRHHDKWLRATENYDIKGCFAMSELGHGSNVRGI 201

Query: 61  ETVTTYDSSTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLYINGNNQGVHAFITQIR 120
           ETVTTYD  +GEF+INTPCESAQKYWIGGAANHATHTIVFSQL ING+NQGVHAFI QIR
Sbjct: 202 ETVTTYDPISGEFVINTPCESAQKYWIGGAANHATHTIVFSQLNINGSNQGVHAFIAQIR 261

Query: 121 DLDGNICPNIRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNSVADVSPSGEYLSVIKN 180
           D DGNICPNIRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNS+ADVSPSGEYLS IKN
Sbjct: 262 DSDGNICPNIRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNSMADVSPSGEYLSAIKN 321

Query: 181 PDQRFGAFLAPLTSGRVTISVSAVYMSKVSLAIAIRYALTRQAFSITPNGPEVLLLDYPS 240
            DQRF AFLAPLTSGRVTI+VS+VY+SK+SLAIAIRYALTR+AFSITPNGPEVLLLDYPS
Sbjct: 322 TDQRFAAFLAPLTSGRVTIAVSSVYISKISLAIAIRYALTRRAFSITPNGPEVLLLDYPS 381

Query: 241 HQRRLLPLLAKVYAMSLAAFELKMMYVKRTPESNKEIHIVSSSYKATFTWNNMRTLQECR 300
           HQ+RLLPLLAK+YAMS +A ELK +YV RTPESNK IHIVSS+YKATFTWNNMRTLQECR
Sbjct: 382 HQQRLLPLLAKIYAMSFSAIELKKLYVNRTPESNKAIHIVSSAYKATFTWNNMRTLQECR 441

Query: 301 EACGGQGIKTENRIGQFKGEFDVQSTFEGDNNVLMQQISKALLAEYIACQMKNKPFSGLG 360
           EACGGQG+KTENRIGQFKGE+DV STFEGDNNVLMQQISKALLAEYIACQ KNKPF GLG
Sbjct: 442 EACGGQGVKTENRIGQFKGEYDVHSTFEGDNNVLMQQISKALLAEYIACQTKNKPFKGLG 501

Query: 361 LEHMNKPCPVIPSQLTSSNLRSSDFQIDLFHLRERDLLKRFAAEVSEHQSRGESKESAFI 420
           LEHMN  CPVIPSQLTSS ++SS+FQIDLFHLRERDLLKRFAAEVSEHQS+G SKESAFI
Sbjct: 502 LEHMNGSCPVIPSQLTSSTIKSSEFQIDLFHLRERDLLKRFAAEVSEHQSQGNSKESAFI 561

Query: 421 LSYQLAEDLGRAFSERAILKTFVETESALPAGSLKNVLGLLRSLYALICVDEDAA 475
           LSYQLAEDLGRAFSERAILKTF+E ESALPAGSLK+VLGLLRSLYALI VDEDAA
Sbjct: 562 LSYQLAEDLGRAFSERAILKTFMEAESALPAGSLKDVLGLLRSLYALISVDEDAA 616


>Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC |
           chr8:38035172-38040185 | 20130731
          Length = 689

 Score =  350 bits (898), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 200/489 (40%), Positives = 276/489 (56%), Gaps = 33/489 (6%)

Query: 3   DHSLAIKIGVHVFLWGGAVKFLGTKRHHDKWLKATENYEMKGCFAMSELGHGSNVRGIET 62
           D SL IK+GV   LWGG+V  LGT++H DK+    +N +  GCFAM+EL HGSNV+G++T
Sbjct: 136 DMSLGIKMGVQYSLWGGSVINLGTQKHKDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQT 195

Query: 63  VTTYDSSTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLYING------NNQGVHAFI 116
           + T+D  T EFII+TP + A K+WIG AA H     VF++L +        ++ GVHAFI
Sbjct: 196 LATFDPITDEFIIDTPNDGAIKWWIGNAAVHGKFATVFARLKLPNYDAKGVSDMGVHAFI 255

Query: 117 TQIRDLDGN-ICPNIRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNSVADVSPSGEYL 175
             IRD+  +   P I I +CGHK+GLNGVDNG + F +VRIPR+NLLN   DVS  G+Y 
Sbjct: 256 VPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGKYT 315

Query: 176 SVIKNPDQRFGAFLAPLTSGRVTISVSAVYMSKVSLAIAIRYALTRQAFSITPNGPEVLL 235
           S + + ++RFGA L  L  GRV ++ S+V + KVS  IAIRY+L RQ F    + PEV +
Sbjct: 316 STLPSVNKRFGATLGELVGGRVGLAYSSVSVLKVSATIAIRYSLLRQQFG-PRDQPEVTI 374

Query: 236 LDYPSHQRRLLPLLAKVYAMSLAAFELKMMYVKRTPESNKE----IHIVSSSYKATFTWN 291
           LDY SHQ +L+P+LA  YA   A   L   Y +     ++E    +H +S+  KA  T  
Sbjct: 375 LDYQSHQHKLMPMLASTYAFHFATTNLVEKYAQMKKSHDEELVADVHALSAGLKAYVTSY 434

Query: 292 NMRTLQECREACGGQGIKTENRIGQFKGEFDVQSTFEGDNNVLMQQISKALLAEYIACQM 351
             ++L  CREACGG G    NR G  + + D+  TFEGDN VL+QQ++  LL +Y     
Sbjct: 435 TAKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADLLKQY----- 489

Query: 352 KNKPFSGLGL------------EHMNKPCPVIPSQLTSSNLRSSDFQIDLFHLRERDLLK 399
             + F G  L             ++++P PV        +LR   FQ+D F  R   LL 
Sbjct: 490 -QRKFQGGTLAVTWNYLRDSMNTYLSQPNPVTARWEGEDHLRDPKFQLDAFRYRTSRLLH 548

Query: 400 RFAAEVSEH-QSRGESKESAFILSYQLAEDLGRAFSERAILKTFVETESALPAGSLKNVL 458
             A  + +H +  G+       L++ L   L  +  E  IL  F+E   + P  S +  L
Sbjct: 549 SVAVRLRKHSKPLGDFGAWNRCLNHLLT--LAESHIESVILAKFIEAVQSCPDASAQAAL 606

Query: 459 GLLRSLYAL 467
            L+  LYAL
Sbjct: 607 KLVCDLYAL 615


>Medtr5g012920.1 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr5:4011592-4004454 | 20130731
          Length = 664

 Score =  222 bits (566), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 151/475 (31%), Positives = 235/475 (49%), Gaps = 34/475 (7%)

Query: 17  WG---GAVKFLGTKRHHDKWLKATENYEMKGCFAMSELGHGSNVRGIETVTTYDSSTGEF 73
           WG    A+K  GT    +KWL      ++ GC+A +ELGHGSNV+G+ET  T+D  T EF
Sbjct: 103 WGMFVPAIKGQGTDEQQEKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEF 162

Query: 74  IINTPCESAQKYWIGGAANHATHTIVFSQLYINGNNQGVHAFITQIRDLDGNI-CPNIRI 132
           II++P  ++ K+W GG    +TH IV+++L   G +QGVH FI Q+R LD ++  P I +
Sbjct: 163 IIHSPTLTSSKWWPGGLGKISTHAIVYARLITEGQDQGVHGFIVQLRSLDDHLPLPGITV 222

Query: 133 AECGHKIG---LNGVDNGRIWFDNVRIPRENLLNSVADVSPSGEYLSVIKNPDQRFGAFL 189
            + G K G    N +DNG + FD+VRIPR  +L  V+ V+  G+Y+     P Q      
Sbjct: 223 GDIGMKFGNAAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQS-NVPRQ---LIY 278

Query: 190 APLTSGRVTISVSAVYMSKVSLAIAIRYALTRQAFSITPNGPEVLLLDYPSHQRRLLPLL 249
             +   R  I   A      ++ IA RY+  R+ F     GPE  ++DY + Q RL PLL
Sbjct: 279 GTMVYVRQAIVADASTALSRAVCIATRYSAVRRQFGSQKGGPETQVIDYKTQQARLFPLL 338

Query: 250 AKVYAMSLAAFELKMMYVKRTP--ESNK-----EIHIVSSSYKATFTWNNMRTLQECREA 302
           A  YA    +  LK +Y   T   ++N      E H  ++  K+  T      ++ECR+ 
Sbjct: 339 ASAYAFRFVSEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTSATADGIEECRKL 398

Query: 303 CGGQGIKTENRIGQFKGEFDVQSTFEGDNNVLMQQISKALLAEYIACQMKNKPFSGLGLE 362
           CGG G    + + +    +    T+EGDN VL+ Q+++ L+          KP       
Sbjct: 399 CGGHGYLCSSGLPELFAVYVPACTYEGDNTVLLLQVARYLVKTISQLGSGKKPVGTTA-- 456

Query: 363 HMNKPCPVIPSQLTSSNLRSSDF-----QIDLFHLRERDLLKRFAAEVSEHQSRGESKES 417
           ++ +   ++  Q  S   R+ D+      I+ F  R      R +  V+++ S+  + E 
Sbjct: 457 YLGRVEQLM--QYQSDVKRAEDWLKPNVVIEAFEARA----ARMSVAVAQNISKFSNPEE 510

Query: 418 AFI-LSYQLAEDLGRAFSERAILKTFVET-ESALPAGSLKNVLGLLRSLYALICV 470
            F  LS  L E    A  +  ++  F+E  +  +P   +K  L +L S+YAL  +
Sbjct: 511 GFQELSVDLVE-AAAAHCQLIVVSKFIEKLQQNIPGKGVKQQLEVLCSIYALFLL 564


>Medtr4g100640.1 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr4:41511892-41519080 | 20130731
          Length = 664

 Score =  209 bits (531), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 236/474 (49%), Gaps = 36/474 (7%)

Query: 17  WG---GAVKFLGTKRHHDKWLKATENYEMKGCFAMSELGHGSNVRGIETVTTYDSSTGEF 73
           WG    A+K  GT+    KWL   +  ++ GC+A +ELGHGSNV+G+ET  T+D  T EF
Sbjct: 103 WGMFIPAIKGQGTEEQQQKWLPLAQRMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEF 162

Query: 74  IINTPCESAQKYWIGGAANHATHTIVFSQLYINGNNQGVHAFITQIRDLDGNI-CPNIRI 132
           +I++P  ++ K+W GG    +TH +V+++L  +G + GVH FI Q+R LD ++  P I +
Sbjct: 163 VIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGRDHGVHGFIVQLRSLDDHLPLPGITV 222

Query: 133 AECGHKIG---LNGVDNGRIWFDNVRIPRENLLNSVADVSPSGEYLSVIKNPDQRFGAFL 189
            + G K G    N +DNG + F++VRIPR+ +L  V+ V+  G+Y+         +G   
Sbjct: 223 GDIGMKFGNGAYNTMDNGVLRFEHVRIPRDQMLMRVSQVTREGKYVQSNVPRQLVYGT-- 280

Query: 190 APLTSGRVTISVSAVYMSKVSLAIAIRYALTRQAFSITPNGPEVLLLDYPSHQRRLLPLL 249
             +   R TI   A      ++ IA RY+  R+ F       E  ++DY + Q RL PLL
Sbjct: 281 --MVYVRQTIVSDASTAMSRAVCIAARYSAVRRQFGGNNGSLESQVIDYKTQQARLFPLL 338

Query: 250 AKVYAMSLAAFELKMMY--VKRTPESNK-----EIHIVSSSYKATFTWNNMRTLQECREA 302
           A  YA       LK +Y  V +  ++N      E H  ++  K+  T      ++ECR+ 
Sbjct: 339 ASAYAFRFVGEWLKWLYTDVMKRLQANDFSTLPEAHACTAGLKSLTTSATSDGIEECRKL 398

Query: 303 CGGQGIKTENRIGQFKGEFDVQSTFEGDNNVLMQQISKALLAEYIACQMKNKPFSGLGLE 362
           CGG G    + + +    +    T+EGDN VL+ Q+++ L+          KP       
Sbjct: 399 CGGHGYLCSSGLPELFAVYVPTCTYEGDNIVLLLQVARHLMKVISRLGSGKKPVGTTA-- 456

Query: 363 HMNKPCPVIPSQLTSSNLRSSDFQIDLFHLRERDLLKRF---AAEVSEHQSRGESKESAF 419
           +M +   ++ ++        SD Q     L    +L+ F   AA +S   ++  +K S  
Sbjct: 457 YMGRVEQLLEAR--------SDVQKAEDWLNPNTVLRAFEARAARMSVACAKNLTKFSNP 508

Query: 420 ILSYQ--LAE--DLGRAFSERAILKTFVET-ESALPAGSLKNVLGLLRSLYALI 468
              +Q  LA+  D  RA  +  ++  F+E  +  +P   +K  L +L ++YAL 
Sbjct: 509 EEGFQELLADLVDAARAHCQLIVVSKFIEKLQQDIPGKGVKRQLEILCNIYALF 562


>Medtr4g100640.2 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr4:41511892-41519080 | 20130731
          Length = 534

 Score =  206 bits (524), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 183/341 (53%), Gaps = 18/341 (5%)

Query: 17  WG---GAVKFLGTKRHHDKWLKATENYEMKGCFAMSELGHGSNVRGIETVTTYDSSTGEF 73
           WG    A+K  GT+    KWL   +  ++ GC+A +ELGHGSNV+G+ET  T+D  T EF
Sbjct: 103 WGMFIPAIKGQGTEEQQQKWLPLAQRMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEF 162

Query: 74  IINTPCESAQKYWIGGAANHATHTIVFSQLYINGNNQGVHAFITQIRDLDGNI-CPNIRI 132
           +I++P  ++ K+W GG    +TH +V+++L  +G + GVH FI Q+R LD ++  P I +
Sbjct: 163 VIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGRDHGVHGFIVQLRSLDDHLPLPGITV 222

Query: 133 AECGHKIG---LNGVDNGRIWFDNVRIPRENLLNSVADVSPSGEYLSVIKNPDQRFGAFL 189
            + G K G    N +DNG + F++VRIPR+ +L  V+ V+  G+Y+         +G   
Sbjct: 223 GDIGMKFGNGAYNTMDNGVLRFEHVRIPRDQMLMRVSQVTREGKYVQSNVPRQLVYGT-- 280

Query: 190 APLTSGRVTISVSAVYMSKVSLAIAIRYALTRQAFSITPNGPEVLLLDYPSHQRRLLPLL 249
             +   R TI   A      ++ IA RY+  R+ F       E  ++DY + Q RL PLL
Sbjct: 281 --MVYVRQTIVSDASTAMSRAVCIAARYSAVRRQFGGNNGSLESQVIDYKTQQARLFPLL 338

Query: 250 AKVYAMSLAAFELKMMY--VKRTPESNK-----EIHIVSSSYKATFTWNNMRTLQECREA 302
           A  YA       LK +Y  V +  ++N      E H  ++  K+  T      ++ECR+ 
Sbjct: 339 ASAYAFRFVGEWLKWLYTDVMKRLQANDFSTLPEAHACTAGLKSLTTSATSDGIEECRKL 398

Query: 303 CGGQGIKTENRIGQFKGEFDVQSTFEGDNNVLMQQISKALL 343
           CGG G    + + +    +    T+EGDN VL+ Q+++ L+
Sbjct: 399 CGGHGYLCSSGLPELFAVYVPTCTYEGDNIVLLLQVARHLM 439


>Medtr7g068850.1 | acyl-CoA dehydrogenase | HC |
           chr7:25296388-25301382 | 20130731
          Length = 433

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 136/327 (41%), Gaps = 46/327 (14%)

Query: 3   DHSLAIKIGVHVFLWGGAVKFLGTKRHHDKWLKATENYEMKGCFAMSELGHGSNVRGIET 62
           D S +  I VH  L    +   G++    K+L +    +   C+A++E  +GS+   ++T
Sbjct: 125 DASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLKTIACWALTEPDYGSDASALKT 184

Query: 63  VTTYDSSTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLYINGNNQGVHAFITQIRDL 122
             T     G +I+       QK WIG +   A   ++F++   N +   ++ +I + +D 
Sbjct: 185 TAT--KVEGGWILE-----GQKRWIGNS-TFADLLVIFAR---NTSTNQINGYIVK-KD- 231

Query: 123 DGNICPNIRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNSVADVSPSGEYLSVIKNPD 182
                P + + +  +KIGL  V NG I    V +P E+ +  V     + + L+V     
Sbjct: 232 ----APGLTVTKIENKIGLRIVQNGDIVMRKVFVPDEDRIEGVNSFQDTNKVLAV----- 282

Query: 183 QRFGAFLAPLTSGRVTISVSAVYMSKVSLAIAIRYALTRQAFSITPNGPEVLLLDYPSHQ 242
                        RV ++   + +S     +  RY   R+ F          L  +  +Q
Sbjct: 283 ------------SRVMVAWQPIGISMGIYDMCHRYLKERKQFGAP-------LAAFQINQ 323

Query: 243 RRLLPLLAKVYAMSLAAFELKMMYVKRTPESNKEIHIVSSSYKATFTWNNMRTLQECREA 302
           ++L+ +L+ V AM L  + L  +Y     ES K     +S  K+  T     T    RE 
Sbjct: 324 QKLVQMLSNVQAMILVGWRLCKLY-----ESGKMTPGHASLGKSWITLRARETAALGREL 378

Query: 303 CGGQGIKTENRIGQFKGEFDVQSTFEG 329
            GG GI  +  + +   + +   T+EG
Sbjct: 379 LGGNGILADFLVAKAFCDLEPIYTYEG 405