Miyakogusa Predicted Gene

Lj1g3v0385470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0385470.1 Non Characterized Hit- tr|G7J5D6|G7J5D6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,79.26,0,seg,NULL,CUFF.25612.1
         (1059 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g077550.1 | transmembrane protein, putative | HC | chr3:34...  1605   0.0  

>Medtr3g077550.1 | transmembrane protein, putative | HC |
            chr3:34856959-34863246 | 20130731
          Length = 1082

 Score = 1605 bits (4156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 806/1082 (74%), Positives = 877/1082 (81%), Gaps = 24/1082 (2%)

Query: 1    MDLLRAFSLCTLCWVLSLLSSVTKCGGSDVSVKFLKAPHVFSHLNSATFAFEVFXXXXXX 60
            M LLR   LC LC VLS L  +TKCGGSDV+VKFLKAPH FSHLNSATFAFEV       
Sbjct: 1    MTLLRVLRLCILCCVLSTLCFITKCGGSDVTVKFLKAPHAFSHLNSATFAFEVLNSGSNR 60

Query: 61   XXXXXXXXXKLDDGITSVCTKRKVRYSSLRDGNHTFEVCTNNGLQGV-TCARHNWTVDTI 119
                     KLD+GI SVCT  +V YSSL+DGNHTFEVCTN G QG+  CA HNWTVDTI
Sbjct: 61   SCANCSLSCKLDNGIRSVCTNGRVTYSSLKDGNHTFEVCTN-GHQGLFGCASHNWTVDTI 119

Query: 120  PPTAYVTPSTIFTNSLNVSVNISFSEPCIGEDFGCKSVNACNLLVYGAGQVIPSSFSMMQ 179
            PPTAYVT +T FT+SLNVSVNISFSEPCIGE F CKSVNACNLLVYGAGQVIPSSF +++
Sbjct: 120  PPTAYVTAATSFTSSLNVSVNISFSEPCIGEGFRCKSVNACNLLVYGAGQVIPSSFKILK 179

Query: 180  PNLMYSLLVSLSSTVQYGRAILVMDRNFCSDIAGNNFTRMPNSSVYIHFDRRKAYVNIRI 239
            PNLMYSLLVSLSSTVQY RAILVMD+NFC+DIAGN+FTRMPNSSVYIH DRRK YVNIR 
Sbjct: 180  PNLMYSLLVSLSSTVQYSRAILVMDKNFCTDIAGNSFTRMPNSSVYIHIDRRKVYVNIRT 239

Query: 240  HVPEKLLQLNSETRTVQATNDYDKLKVFLYFSAPVLNSSTEIMNSLNISQGSLVQTSAKT 299
            HVPEKL+Q+NSETRTVQATND++KLKV+LYFSAPVLNSSTEIMNSL +SQGSL+ TSA+ 
Sbjct: 240  HVPEKLVQINSETRTVQATNDHNKLKVYLYFSAPVLNSSTEIMNSLKVSQGSLLPTSAEN 299

Query: 300  RGNRRFGFMIANISSTSIISVDFNSESIITRQGTPVSPTAPVTFLYDSKRPAVMLSTYRM 359
             GNRRFGFMIANISST+IISV+FNS+SIITRQGT VSP APV FLYDSKRPAVMLST+RM
Sbjct: 300  LGNRRFGFMIANISSTAIISVNFNSKSIITRQGTQVSPNAPVNFLYDSKRPAVMLSTHRM 359

Query: 360  KTKEDNIQILIKFGKPVLGFNTXXXXXXXXXXKSFHHINWSTYIVELQADDDHVFISVPE 419
            +TK+ NIQILI+F KPV GFNT          KSFH + WSTYIVELQADDD VF+SVPE
Sbjct: 360  RTKDHNIQILIEFVKPVFGFNTSCISISGGLLKSFHKLKWSTYIVELQADDDFVFVSVPE 419

Query: 420  NVTRDVAGNKNLASNVLQVRHYSAPMISSVISAFATASFVLTSIAASLLTVSTASLQSVG 479
            NVT DVAGNKNLASNVLQVRHYS P+ISSVISAFATA+F LTSIAA LLT+STASLQSV 
Sbjct: 420  NVTHDVAGNKNLASNVLQVRHYSVPLISSVISAFATATFGLTSIAAGLLTISTASLQSVD 479

Query: 480  TFMRSSPFLIVDPARNLFRTMCHIQVFALSRWLTVKLPVEFYEFSRHLQWTIPYFSVPWE 539
            TF RSS FLIVDPARNLFR +CHIQVFAL+RWL+VK PVEFYEFSRHLQWTIP FSVPWE
Sbjct: 480  TFTRSSSFLIVDPARNLFRILCHIQVFALARWLSVKWPVEFYEFSRHLQWTIPSFSVPWE 539

Query: 540  AGQMNLFMVASGPFRSSSSFAKALASIPNKLLDRNLNFAAAVYGSPLTSSEYQQYFESEN 599
            +G M+LFMV S PF SSSS AKALA+IPN LL +NLN+ A+VYGSPLTSSEYQQYFES N
Sbjct: 540  SGPMSLFMVGSSPFGSSSSSAKALATIPNMLLGQNLNYGASVYGSPLTSSEYQQYFESTN 599

Query: 600  MKPEAEYILDSRHSSGWTDFSRSMFWLAVIFGSLIVLHAFLLIILKFRKRNSETPRTYGA 659
            MKPEAEYILDS+HSSGWTDF R+MFWLAVI GS +VLH FLLIILKFRKRNSE   TYGA
Sbjct: 600  MKPEAEYILDSQHSSGWTDFYRTMFWLAVICGSFMVLHGFLLIILKFRKRNSEKNGTYGA 659

Query: 660  LIFPRFETFLTFLAVPCVCKASAVLIKXXXXXXXXXXXXXXXXXXXXXXXXFMFLSVGIT 719
            L+FPRFE FL FLA+P +CKAS  LI+                        FMFLSVGIT
Sbjct: 660  LVFPRFEIFLLFLALPGICKASTGLIRGGAPAAMAVGIILLIFVSTVLLALFMFLSVGIT 719

Query: 720  FGKLLQYKEVHQEGEKFHWYQELVRVTLGPGKRGQWTWKEQPKSVYLTILGPLFEDLRGP 779
            FGKLLQYKEVH EGE FHWYQEL+RVTLGPGKRGQWTWKE+ KSVYLTI GPLFEDLRGP
Sbjct: 720  FGKLLQYKEVHHEGETFHWYQELIRVTLGPGKRGQWTWKEKAKSVYLTIFGPLFEDLRGP 779

Query: 780  PKYMLSQISGGSHPSQSERIIASDDENEDAEAPFIQKLFGILRIYYVLLESIRRVALGIL 839
            PKYMLSQISGGS PSQ++ II SDDE EDAEAPFIQKLFGILRIY+V LESIRRV+LGIL
Sbjct: 780  PKYMLSQISGGSQPSQNDHIIVSDDETEDAEAPFIQKLFGILRIYFVFLESIRRVSLGIL 839

Query: 840  AGLFIQT--QSSNTPVIIMLSITSFQLFFMVLKKPFIKKKVQLVEIITLTCEVALFASFL 897
            AG+FI T  QSS +P+IIMLSITSF LFFMVLKKPFIKKKVQLVEII+LTCEVA FA+  
Sbjct: 840  AGVFIHTRSQSSKSPIIIMLSITSFMLFFMVLKKPFIKKKVQLVEIISLTCEVAFFATCF 899

Query: 898  VLLKKDYSVRTETKFGIFMLVLFLVGYCSQITNEWYALYMHTRLLDPEEKSFLKGLKIAS 957
            VLLKKD+SVRTETKFGIFMLVLFLVGYCSQI NEWYALY  T+LLDPEEKS  +GLK+AS
Sbjct: 900  VLLKKDFSVRTETKFGIFMLVLFLVGYCSQIANEWYALYAQTKLLDPEEKSLFRGLKVAS 959

Query: 958  IGILVYFFPQNCTKNLEKKLPQNGHGNGDTG----LEXXXXXXXXXXXXTPDTPWLKRLR 1013
            IG ++YF PQ   KNLEKKLPQNGH N +T     +             TPD PWLKR+R
Sbjct: 960  IGFVLYFIPQKWIKNLEKKLPQNGHANSETRDNALIAERCMHSGSRSSGTPDIPWLKRVR 1019

Query: 1014 ELG----------------STSSTTRWSGFWGNXXXXXXXXXXXXXXXXTLHQDLEAIFA 1057
            EL                 STSSTTRWSGFWGN                 L +DLEAIFA
Sbjct: 1020 ELAKGSFSKDRSGVQITDPSTSSTTRWSGFWGNKRSGSSSSDYKPKPKKALDEDLEAIFA 1079

Query: 1058 SK 1059
            SK
Sbjct: 1080 SK 1081