Miyakogusa Predicted Gene
- Lj1g3v0342020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0342020.1 tr|G7J4W1|G7J4W1_MEDTR JmjC domain-containing
protein OS=Medicago truncatula GN=MTR_3g077420 PE=4 SV,76.11,0,A
domain family that is part of the cupin me,JmjC domain; Clavaminate
synthase-like,NULL; JMJC DOMAI,CUFF.25580.1
(344 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g077420.1 | transcription factor, putative | HC | chr3:347... 591 e-169
Medtr3g077420.2 | transcription factor, putative | HC | chr3:347... 586 e-167
Medtr3g077420.3 | transcription factor, putative | HC | chr3:347... 511 e-145
Medtr3g077420.4 | transcription factor, putative | HC | chr3:347... 511 e-145
Medtr3g099370.1 | transferring glycosyl group transferase | HC |... 83 5e-16
Medtr7g106990.1 | F-box plant-like protein | HC | chr7:43589114-... 82 5e-16
Medtr4g066020.1 | transcription factor jumonji (JmjC) domain pro... 49 9e-06
>Medtr3g077420.1 | transcription factor, putative | HC |
chr3:34751208-34755524 | 20130731
Length = 495
Score = 591 bits (1524), Expect = e-169, Method: Compositional matrix adjust.
Identities = 273/330 (82%), Positives = 300/330 (90%)
Query: 10 EKVNGKELSYTEFAEKFMKKNQPVVLTGLMDHHWKACTDWVTLHGQPNFQFFSTHFGASR 69
EKVNGKEL+Y+EF E++M KN+PVVLTGLMDHHW+ACTDWVT G+PN QFF HFG+S+
Sbjct: 16 EKVNGKELNYSEFVERYMDKNKPVVLTGLMDHHWRACTDWVTPDGKPNLQFFFNHFGSSK 75
Query: 70 VQVADCDTRDFTDQKRAEMLVSDFIGRCFQVEDSAVQCNNENDKSDGQSVSVLYLKDWHF 129
VQVADCDTRDFTDQKR EMLVSDF+ RC +VE SAVQC+NEN + +G SVSV YLKDWHF
Sbjct: 76 VQVADCDTRDFTDQKREEMLVSDFLERCLEVEGSAVQCSNENGECNGDSVSVPYLKDWHF 135
Query: 130 VKEYPEYEAYSTPMFFCDDWLNFYLDNFRLHTDSDTDQQNQEICCSDYRFVYMGVKGSWT 189
VKEYPEY AY TP FFCDDWLN YLDNFR++T S +DQQN+EICCSDYRFVYMGVKGSWT
Sbjct: 136 VKEYPEYVAYITPTFFCDDWLNLYLDNFRMNTHSGSDQQNKEICCSDYRFVYMGVKGSWT 195
Query: 190 PLHADVFRSYSWSANVCGKKRWLFLDPSQCHLVFDRNVKSCVYNIFDEVSDSKYPGFKNA 249
PLHADVFRSYSWSANVCGKKRW FLDPSQCHLVFDRN KSCVYNIFDEVSDSK+PGF+ A
Sbjct: 196 PLHADVFRSYSWSANVCGKKRWFFLDPSQCHLVFDRNAKSCVYNIFDEVSDSKFPGFEKA 255
Query: 250 TWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLKDYNEAKEYI 309
WLECTQEA EIIFVPSGWYHQV+NLEDTISINHNWFNAYNLSWVWNLLL DYNEAKEYI
Sbjct: 256 IWLECTQEAREIIFVPSGWYHQVYNLEDTISINHNWFNAYNLSWVWNLLLSDYNEAKEYI 315
Query: 310 EDIRNICDNFEGLCQRNLAANTGAVYYEIF 339
EDI++ICD+FEGLCQRNLAANTG +++ F
Sbjct: 316 EDIKDICDDFEGLCQRNLAANTGMNFFDFF 345
>Medtr3g077420.2 | transcription factor, putative | HC |
chr3:34751208-34755505 | 20130731
Length = 353
Score = 586 bits (1510), Expect = e-167, Method: Compositional matrix adjust.
Identities = 274/325 (84%), Positives = 298/325 (91%)
Query: 10 EKVNGKELSYTEFAEKFMKKNQPVVLTGLMDHHWKACTDWVTLHGQPNFQFFSTHFGASR 69
EKVNGKEL+Y+EF E++M KN+PVVLTGLMDHHW+ACTDWVT G+PN QFF HFG+S+
Sbjct: 16 EKVNGKELNYSEFVERYMDKNKPVVLTGLMDHHWRACTDWVTPDGKPNLQFFFNHFGSSK 75
Query: 70 VQVADCDTRDFTDQKRAEMLVSDFIGRCFQVEDSAVQCNNENDKSDGQSVSVLYLKDWHF 129
VQVADCDTRDFTDQKR EMLVSDF+ RC +VE SAVQC+NEN + +G SVSV YLKDWHF
Sbjct: 76 VQVADCDTRDFTDQKREEMLVSDFLERCLEVEGSAVQCSNENGECNGDSVSVPYLKDWHF 135
Query: 130 VKEYPEYEAYSTPMFFCDDWLNFYLDNFRLHTDSDTDQQNQEICCSDYRFVYMGVKGSWT 189
VKEYPEY AY TP FFCDDWLN YLDNFR++T S +DQQN+EICCSDYRFVYMGVKGSWT
Sbjct: 136 VKEYPEYVAYITPTFFCDDWLNLYLDNFRMNTHSGSDQQNKEICCSDYRFVYMGVKGSWT 195
Query: 190 PLHADVFRSYSWSANVCGKKRWLFLDPSQCHLVFDRNVKSCVYNIFDEVSDSKYPGFKNA 249
PLHADVFRSYSWSANVCGKKRW FLDPSQCHLVFDRN KSCVYNIFDEVSDSK+PGF+ A
Sbjct: 196 PLHADVFRSYSWSANVCGKKRWFFLDPSQCHLVFDRNAKSCVYNIFDEVSDSKFPGFEKA 255
Query: 250 TWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLKDYNEAKEYI 309
WLECTQEA EIIFVPSGWYHQV+NLEDTISINHNWFNAYNLSWVWNLLL DYNEAKEYI
Sbjct: 256 IWLECTQEAREIIFVPSGWYHQVYNLEDTISINHNWFNAYNLSWVWNLLLSDYNEAKEYI 315
Query: 310 EDIRNICDNFEGLCQRNLAANTGAV 334
EDI++ICD+FEGLCQRNLAANTGAV
Sbjct: 316 EDIKDICDDFEGLCQRNLAANTGAV 340
>Medtr3g077420.3 | transcription factor, putative | HC |
chr3:34751208-34755422 | 20130731
Length = 302
Score = 511 bits (1315), Expect = e-145, Method: Compositional matrix adjust.
Identities = 239/287 (83%), Positives = 260/287 (90%)
Query: 10 EKVNGKELSYTEFAEKFMKKNQPVVLTGLMDHHWKACTDWVTLHGQPNFQFFSTHFGASR 69
EKVNGKEL+Y+EF E++M KN+PVVLTGLMDHHW+ACTDWVT G+PN QFF HFG+S+
Sbjct: 16 EKVNGKELNYSEFVERYMDKNKPVVLTGLMDHHWRACTDWVTPDGKPNLQFFFNHFGSSK 75
Query: 70 VQVADCDTRDFTDQKRAEMLVSDFIGRCFQVEDSAVQCNNENDKSDGQSVSVLYLKDWHF 129
VQVADCDTRDFTDQKR EMLVSDF+ RC +VE SAVQC+NEN + +G SVSV YLKDWHF
Sbjct: 76 VQVADCDTRDFTDQKREEMLVSDFLERCLEVEGSAVQCSNENGECNGDSVSVPYLKDWHF 135
Query: 130 VKEYPEYEAYSTPMFFCDDWLNFYLDNFRLHTDSDTDQQNQEICCSDYRFVYMGVKGSWT 189
VKEYPEY AY TP FFCDDWLN YLDNFR++T S +DQQN+EICCSDYRFVYMGVKGSWT
Sbjct: 136 VKEYPEYVAYITPTFFCDDWLNLYLDNFRMNTHSGSDQQNKEICCSDYRFVYMGVKGSWT 195
Query: 190 PLHADVFRSYSWSANVCGKKRWLFLDPSQCHLVFDRNVKSCVYNIFDEVSDSKYPGFKNA 249
PLHADVFRSYSWSANVCGKKRW FLDPSQCHLVFDRN KSCVYNIFDEVSDSK+PGF+ A
Sbjct: 196 PLHADVFRSYSWSANVCGKKRWFFLDPSQCHLVFDRNAKSCVYNIFDEVSDSKFPGFEKA 255
Query: 250 TWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWN 296
WLECTQEA EIIFVPSGWYHQV+NLEDTISINHNWFNAYNLSWV N
Sbjct: 256 IWLECTQEAREIIFVPSGWYHQVYNLEDTISINHNWFNAYNLSWVVN 302
>Medtr3g077420.4 | transcription factor, putative | HC |
chr3:34751208-34755505 | 20130731
Length = 302
Score = 511 bits (1315), Expect = e-145, Method: Compositional matrix adjust.
Identities = 239/287 (83%), Positives = 260/287 (90%)
Query: 10 EKVNGKELSYTEFAEKFMKKNQPVVLTGLMDHHWKACTDWVTLHGQPNFQFFSTHFGASR 69
EKVNGKEL+Y+EF E++M KN+PVVLTGLMDHHW+ACTDWVT G+PN QFF HFG+S+
Sbjct: 16 EKVNGKELNYSEFVERYMDKNKPVVLTGLMDHHWRACTDWVTPDGKPNLQFFFNHFGSSK 75
Query: 70 VQVADCDTRDFTDQKRAEMLVSDFIGRCFQVEDSAVQCNNENDKSDGQSVSVLYLKDWHF 129
VQVADCDTRDFTDQKR EMLVSDF+ RC +VE SAVQC+NEN + +G SVSV YLKDWHF
Sbjct: 76 VQVADCDTRDFTDQKREEMLVSDFLERCLEVEGSAVQCSNENGECNGDSVSVPYLKDWHF 135
Query: 130 VKEYPEYEAYSTPMFFCDDWLNFYLDNFRLHTDSDTDQQNQEICCSDYRFVYMGVKGSWT 189
VKEYPEY AY TP FFCDDWLN YLDNFR++T S +DQQN+EICCSDYRFVYMGVKGSWT
Sbjct: 136 VKEYPEYVAYITPTFFCDDWLNLYLDNFRMNTHSGSDQQNKEICCSDYRFVYMGVKGSWT 195
Query: 190 PLHADVFRSYSWSANVCGKKRWLFLDPSQCHLVFDRNVKSCVYNIFDEVSDSKYPGFKNA 249
PLHADVFRSYSWSANVCGKKRW FLDPSQCHLVFDRN KSCVYNIFDEVSDSK+PGF+ A
Sbjct: 196 PLHADVFRSYSWSANVCGKKRWFFLDPSQCHLVFDRNAKSCVYNIFDEVSDSKFPGFEKA 255
Query: 250 TWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWN 296
WLECTQEA EIIFVPSGWYHQV+NLEDTISINHNWFNAYNLSWV N
Sbjct: 256 IWLECTQEAREIIFVPSGWYHQVYNLEDTISINHNWFNAYNLSWVVN 302
>Medtr3g099370.1 | transferring glycosyl group transferase | HC |
chr3:45540890-45551717 | 20130731
Length = 977
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 59/297 (19%)
Query: 7 GQVEKVNGKELSYTEFAEKF-MKKNQPVVLTGLMDHHWKACTDWVTLHGQPNFQFFSTHF 65
G VE++N ++S +F+ K+ MKK PV+L GL D W A W T ++
Sbjct: 132 GNVERIN--DISLKDFSNKYDMKK--PVMLNGLADA-WPARQKWTTDQ-------LLQNY 179
Query: 66 GASRVQVADCDTRDFTDQKRAEMLVSDFIGRCFQVEDSAVQCNNENDKSDGQSVSVLYLK 125
G +++ K+ M D++ S ++ ++ D LY+
Sbjct: 180 GDVAFKISQ------RSSKKVSMKFKDYV--------SYMEVQHDEDP--------LYIF 217
Query: 126 DWHFVKEYPEY-EAYSTPMFFCDDWLNFYLDNFRLHTDSDTDQQNQEICCSDYRFVYMGV 184
D F + P + Y P F +D + DTD++ YR++ +G
Sbjct: 218 DEKFGEHAPSLLKDYCVPHLFQEDLFDIL----------DTDKR------PSYRWLIIGP 261
Query: 185 KGSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQCHLVFDRNVKSCVYNIFDEVSDSK-- 242
+ S H D + +W+ + G+KRW P + L +V ++ E S
Sbjct: 262 QRSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEEDGDVSIETPSSLQW 321
Query: 243 ----YPGFKNA-TWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWV 294
YP + +ECTQ GE I+VPSGW+H + NLE TI++ N+ N+ N +V
Sbjct: 322 WLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCILNLETTIAVTQNFVNSNNFEFV 378
>Medtr7g106990.1 | F-box plant-like protein | HC |
chr7:43589114-43587759 | 20130731
Length = 442
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 117/286 (40%), Gaps = 69/286 (24%)
Query: 12 VNGKELSYTEFAEKFMKKNQPVVLTGLMDHHWKACTDW-----VTLHGQPNFQFFSTHFG 66
V + +S EF F + N+PV+L G +D+ W A +W V L G F
Sbjct: 211 VRKRGISVAEFVANFEEVNKPVLLEGCIDN-WDALRNWDRDYLVNLCGD------DVKFS 263
Query: 67 ASRVQVADCDTRDFTDQKRAEMLVSDFIGRCFQVEDSAVQCNNENDKSDGQSVSVLYLKD 126
V++ D ++DQ R E LYL D
Sbjct: 264 VGPVEIKLKDYFGYSDQVREE--------------------------------RPLYLFD 291
Query: 127 WHFVKEYPEYEA-YSTPMFFCDDWLNFYLDNFRLHTDSDTDQQNQEICCSDYRFVYMGVK 185
F ++ P+ Y P++F +D L N R DYR++ +G
Sbjct: 292 PKFAEKVPKLGLEYEVPVYFREDLFGV-LGNER----------------PDYRWIIIGPA 334
Query: 186 GSWTPLHADVFRSYSWSANVCGKKRWLFLDP----SQCHLVFDRNVKSCVYNIFDEVSDS 241
GS + H D + +W+A + G K+W+ P H D + +I + +
Sbjct: 335 GSGSSFHVDPNSTSAWNAVIKGSKKWVLFPPDVIPPGVHPSPDGAEVASPVSIIEWFMNF 394
Query: 242 KYPGFKN--ATWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNW 285
Y KN +EC +AGE+IFVPSGW+H V NLE++I++ N+
Sbjct: 395 -YGATKNWKKKPIECICKAGEVIFVPSGWWHLVINLEESIAVTQNY 439
>Medtr4g066020.1 | transcription factor jumonji (JmjC) domain
protein | HC | chr4:24885444-24877856 | 20130731
Length = 413
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 180 VYMGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQCHLVFDRNVKSCVYNI----F 235
+ G G+ TPLH D ++ A V GKK ++ L P+ ++ + N
Sbjct: 298 AWFGPAGTVTPLHHDPH--HNILAQVVGKK-YVRLYPASLSEELFPYSETMLCNSSQVDL 354
Query: 236 DEVSDSKYPGFKNATWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNW 285
D+V + K+P ++ +++C E GE++++P W+H V +L ++S++ W
Sbjct: 355 DDVDEMKFPKVQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSLSVSFWW 404