Miyakogusa Predicted Gene
- Lj1g3v0330940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0330940.1 tr|Q8H6N3|Q8H6N3_SOLLC Alkaline
alpha-galactosidase seed imbibition protein OS=Solanum lycopersicum
,51.09,2e-18,Raffinose_syn,Raffinose synthase;
(Trans)glycosidases,Glycoside hydrolase, superfamily; SUBFAMILY
NO,NODE_103735_length_270_cov_8.662963.path2.1
(106 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g077280.1 | galactinol-raffinose galactosyltransferase | H... 200 2e-52
Medtr6g004880.1 | raffinose synthase or seed inhibition protein ... 189 7e-49
Medtr4g105250.1 | raffinose synthase or seed inhibition protein ... 187 3e-48
Medtr7g106910.1 | galactinol-raffinose galactosyltransferase | H... 149 4e-37
Medtr8g088020.1 | galactinol-raffinose galactosyltransferase | H... 145 1e-35
Medtr1g097450.1 | galactinol-raffinose galactosyltransferase | H... 140 3e-34
Medtr5g096820.1 | galactinol-raffinose galactosyltransferase | H... 93 4e-20
Medtr5g096820.2 | galactinol-raffinose galactosyltransferase | H... 93 5e-20
Medtr7g109790.1 | galactinol-raffinose galactosyltransferase | H... 88 2e-18
Medtr4g115330.1 | raffinose synthase or seed inhibition protein ... 86 7e-18
Medtr4g115330.3 | raffinose synthase or seed inhibition protein ... 86 1e-17
Medtr4g115330.2 | raffinose synthase or seed inhibition protein ... 86 1e-17
Medtr4g115330.4 | raffinose synthase or seed inhibition protein ... 86 1e-17
Medtr4g115330.5 | raffinose synthase or seed inhibition protein ... 86 1e-17
Medtr1g052515.1 | galactinol-raffinose galactosyltransferase | H... 84 2e-17
Medtr7g091880.1 | galactinol-raffinose galactosyltransferase | H... 84 4e-17
Medtr3g075510.1 | raffinose synthase or seed inhibition protein ... 77 5e-15
Medtr3g075510.2 | raffinose synthase or seed inhibition protein ... 77 5e-15
Medtr3g075510.3 | raffinose synthase or seed inhibition protein ... 77 5e-15
>Medtr3g077280.1 | galactinol-raffinose galactosyltransferase | HC |
chr3:34699323-34695961 | 20130731
Length = 786
Score = 200 bits (509), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/106 (86%), Positives = 101/106 (95%)
Query: 1 MVQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKG 60
+ Q++++GLHSHLES GIDGVKVDVIHLLE LSEEYGGRV+LAKAYYKALT+SVKKHF G
Sbjct: 391 LAQEMFEGLHSHLESVGIDGVKVDVIHLLEMLSEEYGGRVELAKAYYKALTSSVKKHFNG 450
Query: 61 NGVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPSGDVNGTYWLQ 106
NGVIASMEHCNDFFLLGTEAI+LGRVGDDFWC+DPSGD NGTYWLQ
Sbjct: 451 NGVIASMEHCNDFFLLGTEAISLGRVGDDFWCSDPSGDPNGTYWLQ 496
>Medtr6g004880.1 | raffinose synthase or seed inhibition protein |
HC | chr6:485489-490474 | 20130731
Length = 787
Score = 189 bits (479), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 97/106 (91%)
Query: 1 MVQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKG 60
+V ++Y+G+HS LE +GIDGVKVDVIHLLE + E+YGGRVDLAKAYYKAL+TSVKKHF G
Sbjct: 392 LVDQMYEGIHSLLEESGIDGVKVDVIHLLEMVGEKYGGRVDLAKAYYKALSTSVKKHFNG 451
Query: 61 NGVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPSGDVNGTYWLQ 106
NGVIASMEHCNDF LLGTEAI+LGRVGDDFWCTDP GD NGTYWLQ
Sbjct: 452 NGVIASMEHCNDFMLLGTEAISLGRVGDDFWCTDPYGDPNGTYWLQ 497
>Medtr4g105250.1 | raffinose synthase or seed inhibition protein |
HC | chr4:43640686-43636241 | 20130731
Length = 778
Score = 187 bits (474), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 84/103 (81%), Positives = 94/103 (91%)
Query: 4 KLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGNGV 63
+LYDGLHSHL+S GIDGVK+DV H+LE LSEEYGGRV+LAKAYYKALT SV+KHFKGNGV
Sbjct: 386 RLYDGLHSHLKSVGIDGVKIDVTHVLEMLSEEYGGRVELAKAYYKALTDSVRKHFKGNGV 445
Query: 64 IASMEHCNDFFLLGTEAIALGRVGDDFWCTDPSGDVNGTYWLQ 106
I+SM+ CNDF LGTE I+LGRVGDDFWCTDP+GD NGTYWLQ
Sbjct: 446 ISSMQQCNDFMFLGTETISLGRVGDDFWCTDPAGDPNGTYWLQ 488
>Medtr7g106910.1 | galactinol-raffinose galactosyltransferase | HC |
chr7:43565171-43561891 | 20130731
Length = 859
Score = 149 bits (377), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 82/102 (80%)
Query: 5 LYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGNGVI 64
LYD +HS+L +G+ GVK+DVIH LE + ++YGGRVDLAKAYY+ LT S+ K+F GNG+I
Sbjct: 468 LYDSMHSYLAESGVTGVKIDVIHCLEYVCDKYGGRVDLAKAYYEGLTKSIAKNFNGNGII 527
Query: 65 ASMEHCNDFFLLGTEAIALGRVGDDFWCTDPSGDVNGTYWLQ 106
ASM+ CNDFF LGT ++LGRVGDDFW DP+GD G +WLQ
Sbjct: 528 ASMQQCNDFFFLGTHQVSLGRVGDDFWFQDPNGDPMGAFWLQ 569
>Medtr8g088020.1 | galactinol-raffinose galactosyltransferase | HC |
chr8:36433089-36429628 | 20130731
Length = 839
Score = 145 bits (365), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 82/105 (78%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V YD +HS L +G+ GVKVDVIH L+ + +EYGGRV+LAKAYY+ LT S+ K+F G+
Sbjct: 456 VSDFYDSMHSFLAESGVTGVKVDVIHTLKYVCDEYGGRVNLAKAYYEGLTKSIAKNFNGS 515
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPSGDVNGTYWLQ 106
G+IASM+ CNDFF LGT+ +++GRVGDDFW DP+GD G +WLQ
Sbjct: 516 GIIASMQQCNDFFFLGTKQVSMGRVGDDFWFQDPNGDSMGVFWLQ 560
>Medtr1g097450.1 | galactinol-raffinose galactosyltransferase | HC |
chr1:43973453-43977111 | 20130731
Length = 854
Score = 140 bits (352), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 78/102 (76%)
Query: 5 LYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGNGVI 64
YD +HS+L +GI GVKVDV+H LE + +EYGGRVDLAKAYY+ LT S+ K+F G+G+I
Sbjct: 463 FYDSMHSYLAESGITGVKVDVMHTLEYVCDEYGGRVDLAKAYYEGLTKSIVKNFNGSGII 522
Query: 65 ASMEHCNDFFLLGTEAIALGRVGDDFWCTDPSGDVNGTYWLQ 106
ASM+ CNDFF LGT+ +++GR GDDFW P D G +WLQ
Sbjct: 523 ASMQQCNDFFFLGTKQVSMGRAGDDFWVNGPEDDPMGAFWLQ 564
>Medtr5g096820.1 | galactinol-raffinose galactosyltransferase | HC |
chr5:42347956-42353040 | 20130731
Length = 760
Score = 93.2 bits (230), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 5 LYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGNGVI 64
YD LHS+L SAGIDGVKVDV ++LETL +GGRV LA+ Y++AL S+ ++F NG+I
Sbjct: 377 FYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGII 436
Query: 65 ASMEHCNDFFLLGTEAIALGRVGDDFWCTDPS 96
M H D L ++ A+ R DDFW DP+
Sbjct: 437 CCMSHNTD-GLYSSKRSAVIRASDDFWPRDPA 467
>Medtr5g096820.2 | galactinol-raffinose galactosyltransferase | HC |
chr5:42347956-42353040 | 20130731
Length = 638
Score = 93.2 bits (230), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 5 LYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGNGVI 64
YD LHS+L SAGIDGVKVDV ++LETL +GGRV LA+ Y++AL S+ ++F NG+I
Sbjct: 377 FYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGII 436
Query: 65 ASMEHCNDFFLLGTEAIALGRVGDDFWCTDPS 96
M H D L ++ A+ R DDFW DP+
Sbjct: 437 CCMSHNTD-GLYSSKRSAVIRASDDFWPRDPA 467
>Medtr7g109790.1 | galactinol-raffinose galactosyltransferase | HC |
chr7:44954912-44957159 | 20130731
Length = 355
Score = 87.8 bits (216), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 7/67 (10%)
Query: 40 VDLAKAYYKALTTSVKKHFKGNGVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPSGDV 99
VDLAKAYY+ LT S+ K+F GNG+IASM+ CNDFF LGT+ +++GRV DP+GD
Sbjct: 9 VDLAKAYYEGLTKSIAKNFNGNGIIASMQQCNDFFFLGTKQVSMGRV-------DPNGDP 61
Query: 100 NGTYWLQ 106
G +WLQ
Sbjct: 62 MGAFWLQ 68
>Medtr4g115330.1 | raffinose synthase or seed inhibition protein |
HC | chr4:47617311-47614489 | 20130731
Length = 795
Score = 85.9 bits (211), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V YD LH +L AG+DGVKVDV +LETL GGRV++ K Y++AL SV ++F N
Sbjct: 409 VFSFYDNLHKYLSRAGVDGVKVDVQCILETLGAGLGGRVEITKQYHQALDASVARNFSDN 468
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDP 95
G IA M H D +A A+ R DDF+ DP
Sbjct: 469 GCIACMSHNTDALYCSKQA-AVVRASDDFYPRDP 501
>Medtr4g115330.3 | raffinose synthase or seed inhibition protein |
HC | chr4:47617371-47613234 | 20130731
Length = 670
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V YD LH +L AG+DGVKVDV +LETL GGRV++ K Y++AL SV ++F N
Sbjct: 284 VFSFYDNLHKYLSRAGVDGVKVDVQCILETLGAGLGGRVEITKQYHQALDASVARNFSDN 343
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDP 95
G IA M H D +A A+ R DDF+ DP
Sbjct: 344 GCIACMSHNTDALYCSKQA-AVVRASDDFYPRDP 376
>Medtr4g115330.2 | raffinose synthase or seed inhibition protein |
HC | chr4:47617371-47613234 | 20130731
Length = 670
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V YD LH +L AG+DGVKVDV +LETL GGRV++ K Y++AL SV ++F N
Sbjct: 284 VFSFYDNLHKYLSRAGVDGVKVDVQCILETLGAGLGGRVEITKQYHQALDASVARNFSDN 343
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDP 95
G IA M H D +A A+ R DDF+ DP
Sbjct: 344 GCIACMSHNTDALYCSKQA-AVVRASDDFYPRDP 376
>Medtr4g115330.4 | raffinose synthase or seed inhibition protein |
HC | chr4:47617371-47613300 | 20130731
Length = 670
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V YD LH +L AG+DGVKVDV +LETL GGRV++ K Y++AL SV ++F N
Sbjct: 284 VFSFYDNLHKYLSRAGVDGVKVDVQCILETLGAGLGGRVEITKQYHQALDASVARNFSDN 343
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDP 95
G IA M H D +A A+ R DDF+ DP
Sbjct: 344 GCIACMSHNTDALYCSKQA-AVVRASDDFYPRDP 376
>Medtr4g115330.5 | raffinose synthase or seed inhibition protein |
HC | chr4:47617371-47613234 | 20130731
Length = 670
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V YD LH +L AG+DGVKVDV +LETL GGRV++ K Y++AL SV ++F N
Sbjct: 284 VFSFYDNLHKYLSRAGVDGVKVDVQCILETLGAGLGGRVEITKQYHQALDASVARNFSDN 343
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDP 95
G IA M H D +A A+ R DDF+ DP
Sbjct: 344 GCIACMSHNTDALYCSKQA-AVVRASDDFYPRDP 376
>Medtr1g052515.1 | galactinol-raffinose galactosyltransferase | HC |
chr1:21378819-21372033 | 20130731
Length = 740
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 5 LYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGNGVI 64
Y+ LH++L S G+DGVKVDV +++ETL +GGRV + ++Y++AL TS+ ++F+ NG I
Sbjct: 357 FYNELHAYLASCGVDGVKVDVQNIIETLGSGHGGRVSITRSYHQALETSIARNFRDNGCI 416
Query: 65 ASMEHCNDFFLLGTEAIALGRVGDDFWCTDPS 96
A M H D L + A+ R DDF+ DP+
Sbjct: 417 ACMCHNTD-GLYSAKQTAVVRASDDFYPHDPA 447
>Medtr7g091880.1 | galactinol-raffinose galactosyltransferase | HC |
chr7:36372945-36367215 | 20130731
Length = 770
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V YD LH++L S G+DGVKVDV +++ETL +GGRV L ++Y+ AL S+ ++F N
Sbjct: 364 VFNFYDELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIARNFSDN 423
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPS 96
G IA M H D L + A+ R DDF+ DP+
Sbjct: 424 GCIACMCHNTD-GLYSAKQTAVVRASDDFYPRDPA 457
>Medtr3g075510.1 | raffinose synthase or seed inhibition protein |
HC | chr3:34386505-34382026 | 20130731
Length = 751
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 5 LYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGNGVI 64
Y+ HS+L S G+DGVKVDV +L+ETL YGGRV L K + +AL TS+ ++F+ N +I
Sbjct: 370 FYNDYHSYLASCGVDGVKVDVQNLIETLGSGYGGRVSLTKRHQEALETSIARNFEHNNLI 429
Query: 65 ASMEHCNDFFLLGTEAIALGRVGDDFWCTDPS 96
M H +D + ++ A R +DF +P+
Sbjct: 430 CCMCHNSD-SIYSSKKSAAARASEDFMPREPT 460
>Medtr3g075510.2 | raffinose synthase or seed inhibition protein |
HC | chr3:34386505-34382026 | 20130731
Length = 638
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 5 LYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGNGVI 64
Y+ HS+L S G+DGVKVDV +L+ETL YGGRV L K + +AL TS+ ++F+ N +I
Sbjct: 370 FYNDYHSYLASCGVDGVKVDVQNLIETLGSGYGGRVSLTKRHQEALETSIARNFEHNNLI 429
Query: 65 ASMEHCNDFFLLGTEAIALGRVGDDFWCTDPS 96
M H +D + ++ A R +DF +P+
Sbjct: 430 CCMCHNSD-SIYSSKKSAAARASEDFMPREPT 460
>Medtr3g075510.3 | raffinose synthase or seed inhibition protein |
HC | chr3:34386505-34382054 | 20130731
Length = 638
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 5 LYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGNGVI 64
Y+ HS+L S G+DGVKVDV +L+ETL YGGRV L K + +AL TS+ ++F+ N +I
Sbjct: 370 FYNDYHSYLASCGVDGVKVDVQNLIETLGSGYGGRVSLTKRHQEALETSIARNFEHNNLI 429
Query: 65 ASMEHCNDFFLLGTEAIALGRVGDDFWCTDPS 96
M H +D + ++ A R +DF +P+
Sbjct: 430 CCMCHNSD-SIYSSKKSAAARASEDFMPREPT 460