Miyakogusa Predicted Gene

Lj1g3v0318250.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0318250.2 tr|Q9LYD2|Q9LYD2_ARATH At5g11600 OS=Arabidopsis
thaliana GN=F15N18_190 PE=2 SV=1,52.69,2e-19, ,CUFF.25528.2
         (98 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110202.1 | hypothetical protein | HC | chr3:51215510-5121...   105   8e-24
Medtr1g006605.1 | hypothetical protein | HC | chr1:56917-59471 |...    69   1e-12
Medtr3g113940.1 | hypothetical protein | HC | chr3:53130213-5313...    55   2e-08

>Medtr3g110202.1 | hypothetical protein | HC |
           chr3:51215510-51217962 | 20130731
          Length = 223

 Score =  105 bits (263), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 57/61 (93%)

Query: 13  QKEPLRIFYESLSKQIPPSEMAEFWLMQHGLLPSERAKKAFDKKQRRQKELRTGTPVKTE 72
           +KEPLRIFYESLSKQIP SEMAEFWLM+HGLL  ++AKKAF+KKQR+QKELRTGTP+K+ 
Sbjct: 112 EKEPLRIFYESLSKQIPTSEMAEFWLMEHGLLSPQKAKKAFEKKQRKQKELRTGTPIKSS 171

Query: 73  T 73
           +
Sbjct: 172 S 172


>Medtr1g006605.1 | hypothetical protein | HC | chr1:56917-59471 |
           20130731
          Length = 195

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 50/65 (76%), Gaps = 2/65 (3%)

Query: 13  QKEPLRIFYESLSKQIPPSEMAEFWLMQHGLL-PSERAKKAFDKKQRRQKELRTGTPVKT 71
           +KEPLRIFYESLSKQIP SEMAEFWLM+HG+L P +  K    K++++QKELR G  +  
Sbjct: 94  EKEPLRIFYESLSKQIPTSEMAEFWLMEHGMLSPEKAKKAFEKKQKKKQKELRAGNSI-A 152

Query: 72  ETSQK 76
           ETS K
Sbjct: 153 ETSNK 157


>Medtr3g113940.1 | hypothetical protein | HC |
           chr3:53130213-53133694 | 20130731
          Length = 263

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 30/37 (81%)

Query: 13  QKEPLRIFYESLSKQIPPSEMAEFWLMQHGLLPSERA 49
           +++P R+FYE+L +QIP SEMA+ WLM+ GLLP E A
Sbjct: 132 ERDPSRVFYETLHEQIPTSEMAQIWLMESGLLPKEVA 168