Miyakogusa Predicted Gene
- Lj1g3v0307940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0307940.1 tr|G7J4A8|G7J4A8_MEDTR Thyroid
receptor-interacting protein OS=Medicago truncatula GN=MTR_3g076930
P,89.47,0,AAA,ATPase, AAA-type, core; P-loop containing nucleoside
triphosphate hydrolases,NULL; no descriptio,CUFF.25509.1
(136 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g076930.1 | thyroid receptor-interacting protein | HC | ch... 211 2e-55
Medtr3g076930.2 | thyroid receptor-interacting protein | HC | ch... 211 2e-55
Medtr7g088850.1 | cell division control-like protein | HC | chr7... 64 5e-11
Medtr7g088980.2 | cell division cycle protein-like/CDC48 protein... 54 5e-08
Medtr7g088980.4 | cell division cycle protein-like/CDC48 protein... 53 7e-08
Medtr7g088980.1 | cell division cycle protein-like/CDC48 protein... 53 7e-08
Medtr7g088980.3 | cell division cycle protein-like/CDC48 protein... 53 9e-08
Medtr7g088980.6 | cell division cycle protein-like/CDC48 protein... 50 5e-07
Medtr7g088980.5 | cell division cycle protein-like/CDC48 protein... 50 6e-07
Medtr7g088830.1 | Cam interacting protein | HC | chr7:34671531-3... 49 1e-06
>Medtr3g076930.1 | thyroid receptor-interacting protein | HC |
chr3:34541974-34536448 | 20130731
Length = 461
Score = 211 bits (536), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/114 (91%), Positives = 110/114 (96%)
Query: 1 MVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTT 60
MVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQ+DKLKS+PNVIILTT
Sbjct: 263 MVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTT 322
Query: 61 SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQVTAN 114
SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQEL+R+GIL +F+ N
Sbjct: 323 SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELMRTGILTNFEDCKN 376
>Medtr3g076930.2 | thyroid receptor-interacting protein | HC |
chr3:34541974-34536602 | 20130731
Length = 461
Score = 211 bits (536), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/114 (91%), Positives = 110/114 (96%)
Query: 1 MVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTT 60
MVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQ+DKLKS+PNVIILTT
Sbjct: 263 MVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTT 322
Query: 61 SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQVTAN 114
SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQEL+R+GIL +F+ N
Sbjct: 323 SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELMRTGILTNFEDCKN 376
>Medtr7g088850.1 | cell division control-like protein | HC |
chr7:34685484-34690084 | 20130731
Length = 559
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 11 VLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIA 70
+ DEV+++A R + SG+ ++ RV++ LLT++D L+ A V++L +N AID A
Sbjct: 382 IFFDEVDAVAGKRGHSSSGNSVAEE-RVLSTLLTEMDGLEEAKGVLVLAATNRREAIDDA 440
Query: 71 FV--DRADIKAYVGPPTLQARYEILR 94
+ R D+K YV PP L+ R+EIL+
Sbjct: 441 LLRPGRLDLKLYVPPPDLEGRFEILK 466
>Medtr7g088980.2 | cell division cycle protein-like/CDC48 protein |
HC | chr7:34743307-34750568 | 20130731
Length = 586
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 11 VLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIA 70
+ DE + +A R + SG R+++ LLT++D L+ A V++L +N AID A
Sbjct: 412 IFFDEADIVAGKRGDSSSGGAVVGE-RLLSTLLTEMDGLEEAKGVLVLAATNRPYAIDAA 470
Query: 71 FV--DRADIKAYVGPPTLQARYEILR 94
+ R D+ YV PP L+ R+EIL+
Sbjct: 471 LMRPGRFDLILYVPPPDLEGRFEILK 496
>Medtr7g088980.4 | cell division cycle protein-like/CDC48 protein |
HC | chr7:34743307-34750568 | 20130731
Length = 492
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 11 VLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIA 70
+ DE + +A R + SG R+++ LLT++D L+ A V++L +N AID A
Sbjct: 318 IFFDEADIVAGKRGDSSSGGAVVGE-RLLSTLLTEMDGLEEAKGVLVLAATNRPYAIDAA 376
Query: 71 FV--DRADIKAYVGPPTLQARYEILR 94
+ R D+ YV PP L+ R+EIL+
Sbjct: 377 LMRPGRFDLILYVPPPDLEGRFEILK 402
>Medtr7g088980.1 | cell division cycle protein-like/CDC48 protein |
HC | chr7:34743307-34750568 | 20130731
Length = 560
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 11 VLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIA 70
+ DE + +A R + SG R+++ LLT++D L+ A V++L +N AID A
Sbjct: 386 IFFDEADIVAGKRGDSSSGGAVVGE-RLLSTLLTEMDGLEEAKGVLVLAATNRPYAIDAA 444
Query: 71 FV--DRADIKAYVGPPTLQARYEILR 94
+ R D+ YV PP L+ R+EIL+
Sbjct: 445 LMRPGRFDLILYVPPPDLEGRFEILK 470
>Medtr7g088980.3 | cell division cycle protein-like/CDC48 protein |
HC | chr7:34744189-34750568 | 20130731
Length = 410
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 11 VLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIA 70
+ DE + +A R + SG R+++ LLT++D L+ A V++L +N AID A
Sbjct: 236 IFFDEADIVAGKRGDSSSGGAVVGE-RLLSTLLTEMDGLEEAKGVLVLAATNRPYAIDAA 294
Query: 71 FV--DRADIKAYVGPPTLQARYEILR 94
+ R D+ YV PP L+ R+EIL+
Sbjct: 295 LMRPGRFDLILYVPPPDLEGRFEILK 320
>Medtr7g088980.6 | cell division cycle protein-like/CDC48 protein |
HC | chr7:34743307-34750568 | 20130731
Length = 543
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 37 RVVNALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 94
R+++ LLT++D L+ A V++L +N AID A + R D+ YV PP L+ R+EIL+
Sbjct: 394 RLLSTLLTEMDGLEEAKGVLVLAATNRPYAIDAALMRPGRFDLILYVPPPDLEGRFEILK 453
>Medtr7g088980.5 | cell division cycle protein-like/CDC48 protein |
HC | chr7:34743307-34750568 | 20130731
Length = 517
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 37 RVVNALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 94
R+++ LLT++D L+ A V++L +N AID A + R D+ YV PP L+ R+EIL+
Sbjct: 368 RLLSTLLTEMDGLEEAKGVLVLAATNRPYAIDAALMRPGRFDLILYVPPPDLEGRFEILK 427
>Medtr7g088830.1 | Cam interacting protein | HC |
chr7:34671531-34683556 | 20130731
Length = 963
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 11 VLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIA 70
+ DE++SLA R G SD RV N LL QLD ++ +V ++ +N ID A
Sbjct: 758 IFFDEIDSLAVTRGKDGDGVSVSD--RVTNQLLIQLDGVRKRVDVAVIAATNRLENIDPA 815
Query: 71 FV--DRADIKAYVGPPTLQARYEILR 94
+ R D YVGPP R EI R
Sbjct: 816 LLRPGRFDRLLYVGPPNKMDREEIFR 841